RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 HIST1H2AHQ96KK5 128 aa16.49■□□□□ 0.23
SMG6-214ENST00000573827 HIST1H2AJQ99878 128 aa16.49■□□□□ 0.23
SMG6-214ENST00000573827 HAUS8Q9BT25 410 aa16.49■□□□□ 0.23
SMG6-214ENST00000573827 H2AFJQ9BTM1 129 aa16.49■□□□□ 0.23
SMG6-214ENST00000573827 VN1R1Q9GZP7 353 aa16.49■□□□□ 0.23
SMG6-214ENST00000573827 ZNF700Q9H0M5 742 aa16.49■□□□□ 0.23
SMG6-214ENST00000573827 RHOJQ9H4E5 214 aa16.49■□□□□ 0.23
SMG6-214ENST00000573827 VPS4AQ9UN37 437 aa16.49■□□□□ 0.23
SMG6-214ENST00000573827 SGK494L7N484 410 aa16.48■□□□□ 0.23
SMG6-214ENST00000573827 PCDH17O14917 1159 aa16.48■□□□□ 0.23
SMG6-214ENST00000573827 CBX6O95503 412 aa16.48■□□□□ 0.23
SMG6-214ENST00000573827 SERPINA7P05543 415 aa16.48■□□□□ 0.23
SMG6-214ENST00000573827 ANXA5P08758 320 aa16.48■□□□□ 0.23
SMG6-214ENST00000573827 SSTR1P30872 391 aa16.48■□□□□ 0.23
SMG6-214ENST00000573827 CCR8P51685 355 aa16.48■□□□□ 0.23
SMG6-214ENST00000573827 MEF2AQ02078 507 aaPredicted RBP16.48■□□□□ 0.23
SMG6-214ENST00000573827 EEF1A2Q05639 463 aaKnown RBP16.48■□□□□ 0.23
SMG6-214ENST00000573827 MFAP5Q13361 173 aa16.48■□□□□ 0.23
SMG6-214ENST00000573827 TRADDQ15628 312 aa16.48■□□□□ 0.23
SMG6-214ENST00000573827 NDUFA9Q16795 377 aa16.48■□□□□ 0.23
SMG6-214ENST00000573827 CAMKVQ8NCB2 501 aa16.48■□□□□ 0.23
SMG6-214ENST00000573827 SLC13A3Q8WWT9 602 aa16.48■□□□□ 0.23
SMG6-214ENST00000573827 ANP32BQ92688 251 aaKnown RBP16.48■□□□□ 0.23
SMG6-214ENST00000573827 ALKBH8Q96BT7 664 aaKnown RBP16.48■□□□□ 0.23
SMG6-214ENST00000573827 VPS39Q96JC1 886 aa16.48■□□□□ 0.23
SMG6-214ENST00000573827 VPS50Q96JG6 964 aa16.48■□□□□ 0.23
SMG6-214ENST00000573827 LMF1Q96S06 567 aa16.48■□□□□ 0.23
SMG6-214ENST00000573827 FAM129AQ9BZQ8 928 aa16.48■□□□□ 0.23
SMG6-214ENST00000573827 DPH5Q9H2P9 285 aa16.48■□□□□ 0.23
SMG6-214ENST00000573827 SLC22A7Q9Y694 548 aa16.48■□□□□ 0.23
SMG6-214ENST00000573827 SCN2AQ99250 2005 aa16.48■□□□□ 0.23
SMG6-214ENST00000573827 DIDO1Q9BTC0 2240 aaKnown RBP16.47■□□□□ 0.23
SMG6-214ENST00000573827 NSG1A0A0A6YYJ2 146 aa16.47■□□□□ 0.23
SMG6-214ENST00000573827 TRBC2A0A5B9 178 aa16.47■□□□□ 0.23
SMG6-214ENST00000573827 NPEPPSL1A6NEC2 478 aa16.47■□□□□ 0.23
SMG6-214ENST00000573827 OR2W5A6NFC9 320 aa16.47■□□□□ 0.23
SMG6-214ENST00000573827 DNAJB6O75190 326 aa16.47■□□□□ 0.23
SMG6-214ENST00000573827 SEMA7AO75326 666 aa16.47■□□□□ 0.23
SMG6-214ENST00000573827 GUCA1CO95843 209 aa16.47■□□□□ 0.23
SMG6-214ENST00000573827 HEXBP07686 556 aa16.47■□□□□ 0.23
SMG6-214ENST00000573827 CYC1P08574 325 aa16.47■□□□□ 0.23
SMG6-214ENST00000573827 VARSP26640 1264 aaKnown RBP16.47■□□□□ 0.23
SMG6-214ENST00000573827 TSFMP43897 325 aaKnown RBP16.47■□□□□ 0.23
SMG6-214ENST00000573827 SCTRP47872 440 aa16.47■□□□□ 0.23
SMG6-214ENST00000573827 AVPR1BP47901 424 aa16.47■□□□□ 0.23
SMG6-214ENST00000573827 GPX6P59796 221 aa16.47■□□□□ 0.23
SMG6-214ENST00000573827 ETF1P62495 437 aaKnown RBP16.47■□□□□ 0.23
SMG6-214ENST00000573827 CDKL1Q00532 357 aa16.47■□□□□ 0.23
SMG6-214ENST00000573827 C2orf54Q08AI8 447 aa16.47■□□□□ 0.23
SMG6-214ENST00000573827 FAAH2Q6GMR7 532 aa16.47■□□□□ 0.23
SMG6-214ENST00000573827 ZDHHC24Q6UX98 284 aa16.47■□□□□ 0.23
SMG6-214ENST00000573827 ISLR2Q6UXK2 745 aa16.47■□□□□ 0.23
SMG6-214ENST00000573827 CYS1Q717R9 158 aa16.47■□□□□ 0.23
SMG6-214ENST00000573827 ZNF572Q7Z3I7 529 aaPredicted RBP16.47■□□□□ 0.23
SMG6-214ENST00000573827 KBTBD2Q8IY47 623 aa16.47■□□□□ 0.23
SMG6-214ENST00000573827 KLHDC8AQ8IYD2 350 aa16.47■□□□□ 0.23
SMG6-214ENST00000573827 BBOF1Q8ND07 529 aa16.47■□□□□ 0.23
SMG6-214ENST00000573827 OR51Q1Q8NH59 317 aa16.47■□□□□ 0.23
SMG6-214ENST00000573827 ZCCHC10Q8TBK6 192 aa16.47■□□□□ 0.23
SMG6-214ENST00000573827 BRIX1Q8TDN6 353 aaKnown RBP16.47■□□□□ 0.23
SMG6-214ENST00000573827 SLC5A11Q8WWX8 675 aa16.47■□□□□ 0.23
SMG6-214ENST00000573827 ATL1Q8WXF7 558 aa16.47■□□□□ 0.23
SMG6-214ENST00000573827 YIPF2Q9BWQ6 316 aa16.47■□□□□ 0.23
SMG6-214ENST00000573827 AICDAQ9GZX7 198 aa16.47■□□□□ 0.23
SMG6-214ENST00000573827 POPDC3Q9HBV1 291 aa16.47■□□□□ 0.23
SMG6-214ENST00000573827 LANCL2Q9NS86 450 aa16.47■□□□□ 0.23
SMG6-214ENST00000573827 HCN3Q9P1Z3 774 aa16.47■□□□□ 0.23
SMG6-214ENST00000573827 MKL2Q9ULH7 1088 aa16.47■□□□□ 0.23
SMG6-214ENST00000573827 MTO1Q9Y2Z2 717 aaKnown RBP16.47■□□□□ 0.23
SMG6-214ENST00000573827 ZGRF1Q86YA3 2104 aa16.46■□□□□ 0.23
SMG6-214ENST00000573827 TCRBV9S1A1TA0A576 114 aa16.46■□□□□ 0.23
SMG6-214ENST00000573827 FAM159BA6NKW6 160 aa16.46■□□□□ 0.23
SMG6-214ENST00000573827 EIF3HO15372 352 aaKnown RBP eCLIP16.46■□□□□ 0.23
SMG6-214ENST00000573827 RDH16O75452 317 aa16.46■□□□□ 0.23
SMG6-214ENST00000573827 XCR1P46094 333 aa16.46■□□□□ 0.23
SMG6-214ENST00000573827 SLC6A12P48065 614 aa16.46■□□□□ 0.23
SMG6-214ENST00000573827 REEP5Q00765 189 aa16.46■□□□□ 0.23
SMG6-214ENST00000573827 HYAL2Q12891 473 aa16.46■□□□□ 0.23
SMG6-214ENST00000573827 TSNQ15631 228 aaKnown RBP16.46■□□□□ 0.23
SMG6-214ENST00000573827 LANCL3Q6ZV70 420 aa16.46■□□□□ 0.23
SMG6-214ENST00000573827 NKAPQ8N5F7 415 aaKnown RBP16.46■□□□□ 0.23
SMG6-214ENST00000573827 ANKRD53Q8N9V6 530 aa16.46■□□□□ 0.23
SMG6-214ENST00000573827 NT5CQ8TCD5 201 aa16.46■□□□□ 0.23
SMG6-214ENST00000573827 CYTH2Q99418 400 aa16.46■□□□□ 0.23
SMG6-214ENST00000573827 ILKAPQ9H0C8 392 aaPredicted RBP16.46■□□□□ 0.23
SMG6-214ENST00000573827 SAYSD1Q9NPB0 183 aa16.46■□□□□ 0.23
SMG6-214ENST00000573827 RIC8BQ9NVN3 520 aa16.46■□□□□ 0.23
SMG6-214ENST00000573827 OARD1Q9Y530 152 aa16.46■□□□□ 0.23
SMG6-214ENST00000573827 CPAMD8Q8IZJ3 1885 aa16.46■□□□□ 0.22
SMG6-214ENST00000573827 C4orf51C9J302 202 aa16.45■□□□□ 0.22
SMG6-214ENST00000573827 E2F3O00716 465 aa16.45■□□□□ 0.22
SMG6-214ENST00000573827 NDC80O14777 642 aa16.45■□□□□ 0.22
SMG6-214ENST00000573827 GALR3O60755 368 aaPredicted RBP16.45■□□□□ 0.22
SMG6-214ENST00000573827 C8orf89P0DMQ9 161 aa16.45■□□□□ 0.22
SMG6-214ENST00000573827 ITGAMP11215 1152 aa16.45■□□□□ 0.22
SMG6-214ENST00000573827 SAT1P21673 171 aa16.45■□□□□ 0.22
SMG6-214ENST00000573827 RHAGQ02094 409 aa16.45■□□□□ 0.22
SMG6-214ENST00000573827 PWP1Q13610 501 aa16.45■□□□□ 0.22
SMG6-214ENST00000573827 ZKSCAN8Q15776 578 aaPredicted RBP16.45■□□□□ 0.22
SMG6-214ENST00000573827 EIF2S3LQ2VIR3 472 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms