RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 NFKB2Q00653 900 aa12.91□□□□□ -0.34
RPAIN-213ENST00000573577 REEP5Q00765 189 aa12.91□□□□□ -0.34
RPAIN-213ENST00000573577 IRF8Q02556 426 aa12.91□□□□□ -0.34
RPAIN-213ENST00000573577 LAPTM5Q13571 262 aa12.91□□□□□ -0.34
RPAIN-213ENST00000573577 LY6DQ14210 128 aa12.91□□□□□ -0.34
RPAIN-213ENST00000573577 NDUFA9Q16795 377 aa12.91□□□□□ -0.34
RPAIN-213ENST00000573577 MUM1Q2TAK8 710 aa12.91□□□□□ -0.34
RPAIN-213ENST00000573577 XKR6Q5GH73 641 aa12.91□□□□□ -0.34
RPAIN-213ENST00000573577 PAGE2BQ5JRK9 111 aa12.91□□□□□ -0.34
RPAIN-213ENST00000573577 ATP1A1-AS1Q5TC04 95 aa12.91□□□□□ -0.34
RPAIN-213ENST00000573577 GARNL3Q5VVW2 1013 aa12.91□□□□□ -0.34
RPAIN-213ENST00000573577 ZNF385CQ66K41 422 aaPredicted RBP12.91□□□□□ -0.34
RPAIN-213ENST00000573577 LCN10Q6JVE6 187 aa12.91□□□□□ -0.34
RPAIN-213ENST00000573577 BORAQ6PGQ7 559 aa12.91□□□□□ -0.34
RPAIN-213ENST00000573577 SLCO4C1Q6ZQN7 724 aa12.91□□□□□ -0.34
RPAIN-213ENST00000573577 PLD3Q8IV08 490 aa12.91□□□□□ -0.34
RPAIN-213ENST00000573577 SRRM1Q8IYB3 904 aaKnown RBP12.91□□□□□ -0.34
RPAIN-213ENST00000573577 OR4N4Q8N0Y3 316 aa12.91□□□□□ -0.34
RPAIN-213ENST00000573577 C4orf33Q8N1A6 199 aa12.91□□□□□ -0.34
RPAIN-213ENST00000573577 MFSD9Q8NBP5 474 aa12.91□□□□□ -0.34
RPAIN-213ENST00000573577 TTLQ8NG68 377 aa12.91□□□□□ -0.34
RPAIN-213ENST00000573577 CCDC126Q96EE4 140 aa12.91□□□□□ -0.34
RPAIN-213ENST00000573577 PTCD3Q96EY7 689 aaKnown RBP12.91□□□□□ -0.34
RPAIN-213ENST00000573577 ZIM3Q96PE6 472 aa12.91□□□□□ -0.34
RPAIN-213ENST00000573577 SMC6Q96SB8 1091 aa12.91□□□□□ -0.34
RPAIN-213ENST00000573577 C17orf62Q9BQA9 187 aa12.91□□□□□ -0.34
RPAIN-213ENST00000573577 ARHGAP9Q9BRR9 750 aa12.91□□□□□ -0.34
RPAIN-213ENST00000573577 EFCAB11Q9BUY7 163 aa12.91□□□□□ -0.34
RPAIN-213ENST00000573577 STMN4Q9H169 189 aaPredicted RBP12.91□□□□□ -0.34
RPAIN-213ENST00000573577 CUTCQ9NTM9 273 aa12.91□□□□□ -0.34
RPAIN-213ENST00000573577 MKS1Q9NXB0 559 aa12.91□□□□□ -0.34
RPAIN-213ENST00000573577 MID2Q9UJV3 735 aa12.91□□□□□ -0.34
RPAIN-213ENST00000573577 HEATR5BQ9P2D3 2071 aa12.9□□□□□ -0.34
RPAIN-213ENST00000573577 A0A1B0GX78 115 aa12.9□□□□□ -0.34
RPAIN-213ENST00000573577 FEZF1A0PJY2 475 aa12.9□□□□□ -0.34
RPAIN-213ENST00000573577 HYKKA2RU49 373 aa12.9□□□□□ -0.34
RPAIN-213ENST00000573577 GOLGA6L10A6NI86 522 aa12.9□□□□□ -0.34
RPAIN-213ENST00000573577 RECKO95980 971 aa12.9□□□□□ -0.34
RPAIN-213ENST00000573577 RAB40ALP0C0E4 278 aa12.9□□□□□ -0.34
RPAIN-213ENST00000573577 EEF1DP29692 281 aaKnown RBP12.9□□□□□ -0.34
RPAIN-213ENST00000573577 AHRP35869 848 aa12.9□□□□□ -0.34
RPAIN-213ENST00000573577 BCL6P41182 706 aa12.9□□□□□ -0.34
RPAIN-213ENST00000573577 GCGRP47871 477 aa12.9□□□□□ -0.34
RPAIN-213ENST00000573577 RPS18P62269 152 aaKnown RBP12.9□□□□□ -0.34
RPAIN-213ENST00000573577 MEF2AQ02078 507 aaPredicted RBP12.9□□□□□ -0.34
RPAIN-213ENST00000573577 RGS1Q08116 209 aa12.9□□□□□ -0.34
RPAIN-213ENST00000573577 GTF2H2Q13888 395 aa12.9□□□□□ -0.34
RPAIN-213ENST00000573577 ERV3-1Q14264 604 aa12.9□□□□□ -0.34
RPAIN-213ENST00000573577 TBCCQ15814 346 aa12.9□□□□□ -0.34
RPAIN-213ENST00000573577 HIST2H2ACQ16777 129 aaPredicted RBP12.9□□□□□ -0.34
RPAIN-213ENST00000573577 PRTGQ2VWP7 1150 aa12.9□□□□□ -0.34
RPAIN-213ENST00000573577 HIST2H2AA3Q6FI13 130 aa12.9□□□□□ -0.34
RPAIN-213ENST00000573577 GTF2H2CQ6P1K8 395 aa12.9□□□□□ -0.34
RPAIN-213ENST00000573577 FAM198BQ6UWH4 519 aa12.9□□□□□ -0.34
RPAIN-213ENST00000573577 SYVN1Q86TM6 617 aa12.9□□□□□ -0.34
RPAIN-213ENST00000573577 ASPGQ86U10 573 aa12.9□□□□□ -0.34
RPAIN-213ENST00000573577 TMEM151AQ8N4L1 468 aa12.9□□□□□ -0.34
RPAIN-213ENST00000573577 TEX9Q8N6V9 391 aa12.9□□□□□ -0.34
RPAIN-213ENST00000573577 ENDOVQ8N8Q3 282 aaKnown RBP12.9□□□□□ -0.34
RPAIN-213ENST00000573577 CCDC63Q8NA47 563 aa12.9□□□□□ -0.34
RPAIN-213ENST00000573577 TRPV3Q8NET8 790 aa12.9□□□□□ -0.34
RPAIN-213ENST00000573577 RDH11Q8TC12 318 aa12.9□□□□□ -0.34
RPAIN-213ENST00000573577 SLC13A3Q8WWT9 602 aa12.9□□□□□ -0.34
RPAIN-213ENST00000573577 UBE2E3Q969T4 207 aa12.9□□□□□ -0.34
RPAIN-213ENST00000573577 APOPT1Q96IL0 206 aa12.9□□□□□ -0.34
RPAIN-213ENST00000573577 SEC16BQ96JE7 1060 aa12.9□□□□□ -0.34
RPAIN-213ENST00000573577 GBP5Q96PP8 586 aa12.9□□□□□ -0.34
RPAIN-213ENST00000573577 CENPHQ9H3R5 247 aa12.9□□□□□ -0.34
RPAIN-213ENST00000573577 STARD5Q9NSY2 213 aa12.9□□□□□ -0.34
RPAIN-213ENST00000573577 DHCR7Q9UBM7 475 aaKnown RBP12.9□□□□□ -0.34
RPAIN-213ENST00000573577 ZFP69BQ9UJL9 534 aa12.9□□□□□ -0.34
RPAIN-213ENST00000573577 FARSAQ9Y285 508 aaKnown RBP12.9□□□□□ -0.34
RPAIN-213ENST00000573577 KALRNO60229 2985 aa12.9□□□□□ -0.35
RPAIN-213ENST00000573577 A8MT66 165 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 FOXO6A8MYZ6 492 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 C9J4A7 227 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 E2F3O00716 465 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 DSCR3O14972 297 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 UGDHO60701 494 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 SIX3O95343 332 aaPredicted RBP12.89□□□□□ -0.35
RPAIN-213ENST00000573577 PRB1P04280 392 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 CAPN1P07384 714 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 CD63P08962 238 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 FURINP09958 794 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 SBK3P0C264 359 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 FAM87AP0C7U9 286 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 MYL2P10916 166 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 PIM1P11309 404 aaPredicted RBP12.89□□□□□ -0.35
RPAIN-213ENST00000573577 ALAS2P22557 587 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 VARSP26640 1264 aaKnown RBP12.89□□□□□ -0.35
RPAIN-213ENST00000573577 HPDP32754 393 aaPredicted RBP12.89□□□□□ -0.35
RPAIN-213ENST00000573577 CASP2P42575 452 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 SCTRP47872 440 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 NAA20P61599 178 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 DCDP81605 110 aaKnown RBP12.89□□□□□ -0.35
RPAIN-213ENST00000573577 PCDH1Q08174 1060 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 CHIT1Q13231 466 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 PWP1Q13610 501 aa12.89□□□□□ -0.35
RPAIN-213ENST00000573577 SLBPQ14493 270 aaKnown RBP eCLIP12.89□□□□□ -0.35
RPAIN-213ENST00000573577 NCF4Q15080 339 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms