RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 NDUFA9Q16795 377 aa17.1■□□□□ 0.33
CHD3-214ENST00000572579 CATSPEREQ5SY80 951 aa17.1■□□□□ 0.33
CHD3-214ENST00000572579 RIPOR1Q6ZS17 1223 aa17.1■□□□□ 0.33
CHD3-214ENST00000572579 MAMDC2Q7Z304 686 aaPredicted RBP17.1■□□□□ 0.33
CHD3-214ENST00000572579 ASPGQ86U10 573 aa17.1■□□□□ 0.33
CHD3-214ENST00000572579 C17orf64Q86WR6 236 aa17.1■□□□□ 0.33
CHD3-214ENST00000572579 KLHL7Q8IXQ5 586 aa17.1■□□□□ 0.33
CHD3-214ENST00000572579 AFAP1L2Q8N4X5 818 aa17.1■□□□□ 0.33
CHD3-214ENST00000572579 ZCCHC10Q8TBK6 192 aa17.1■□□□□ 0.33
CHD3-214ENST00000572579 SLC13A3Q8WWT9 602 aa17.1■□□□□ 0.33
CHD3-214ENST00000572579 CFAP36Q96G28 342 aa17.1■□□□□ 0.33
CHD3-214ENST00000572579 C5orf34Q96MH7 638 aa17.1■□□□□ 0.33
CHD3-214ENST00000572579 NPAS2Q99743 824 aa17.1■□□□□ 0.33
CHD3-214ENST00000572579 TRIM51Q9BSJ1 452 aa17.1■□□□□ 0.33
CHD3-214ENST00000572579 SARGQ9BW04 601 aa17.1■□□□□ 0.33
CHD3-214ENST00000572579 GRPEL1Q9HAV7 217 aa17.1■□□□□ 0.33
CHD3-214ENST00000572579 LANCL2Q9NS86 450 aa17.1■□□□□ 0.33
CHD3-214ENST00000572579 RIC8BQ9NVN3 520 aa17.1■□□□□ 0.33
CHD3-214ENST00000572579 CHMP2BQ9UQN3 213 aa17.1■□□□□ 0.33
CHD3-214ENST00000572579 SVILO95425 2214 aa17.09■□□□□ 0.33
CHD3-214ENST00000572579 ZNF860A6NHJ4 632 aa17.09■□□□□ 0.33
CHD3-214ENST00000572579 LRRTM2O43300 516 aa17.09■□□□□ 0.33
CHD3-214ENST00000572579 XCR1P46094 333 aa17.09■□□□□ 0.33
CHD3-214ENST00000572579 IL2P60568 153 aa17.09■□□□□ 0.33
CHD3-214ENST00000572579 FASTKD3Q14CZ7 662 aaKnown RBP17.09■□□□□ 0.33
CHD3-214ENST00000572579 FCRLBQ6BAA4 426 aa17.09■□□□□ 0.33
CHD3-214ENST00000572579 CAPN13Q6MZZ7 669 aaPredicted RBP17.09■□□□□ 0.33
CHD3-214ENST00000572579 LRRC8EQ6NSJ5 796 aa17.09■□□□□ 0.33
CHD3-214ENST00000572579 SBSNQ6UWP8 590 aa17.09■□□□□ 0.33
CHD3-214ENST00000572579 CPEB2Q7Z5Q1 589 aaKnown RBP17.09■□□□□ 0.33
CHD3-214ENST00000572579 ANKRD37Q7Z713 158 aa17.09■□□□□ 0.33
CHD3-214ENST00000572579 PCGF5Q86SE9 256 aa17.09■□□□□ 0.33
CHD3-214ENST00000572579 LURAP1LQ8IV03 231 aa17.09■□□□□ 0.33
CHD3-214ENST00000572579 MYO1HQ8N1T3 1032 aa17.09■□□□□ 0.33
CHD3-214ENST00000572579 GPATCH11Q8N954 259 aa17.09■□□□□ 0.33
CHD3-214ENST00000572579 SNF8Q96H20 258 aa17.09■□□□□ 0.33
CHD3-214ENST00000572579 CAPZA3Q96KX2 299 aa17.09■□□□□ 0.33
CHD3-214ENST00000572579 NAT9Q9BTE0 207 aa17.09■□□□□ 0.33
CHD3-214ENST00000572579 AICDAQ9GZX7 198 aa17.09■□□□□ 0.33
CHD3-214ENST00000572579 NAALAD2Q9Y3Q0 740 aa17.09■□□□□ 0.33
CHD3-214ENST00000572579 ZSCAN12O43309 604 aa17.08■□□□□ 0.32
CHD3-214ENST00000572579 PIAS1O75925 651 aa17.08■□□□□ 0.32
CHD3-214ENST00000572579 WFS1O76024 890 aa17.08■□□□□ 0.32
CHD3-214ENST00000572579 TCP1P17987 556 aaKnown RBP17.08■□□□□ 0.32
CHD3-214ENST00000572579 MST1P26927 711 aa17.08■□□□□ 0.32
CHD3-214ENST00000572579 DCTP40126 519 aa17.08■□□□□ 0.32
CHD3-214ENST00000572579 ITGA8P53708 1063 aa17.08■□□□□ 0.32
CHD3-214ENST00000572579 KCNK10P57789 538 aa17.08■□□□□ 0.32
CHD3-214ENST00000572579 MRPS25P82663 173 aaKnown RBP17.08■□□□□ 0.32
CHD3-214ENST00000572579 RHAGQ02094 409 aa17.08■□□□□ 0.32
CHD3-214ENST00000572579 MORF4L2Q15014 288 aa17.08■□□□□ 0.32
CHD3-214ENST00000572579 PPP1R3AQ16821 1122 aa17.08■□□□□ 0.32
CHD3-214ENST00000572579 MINDY4Q4G0A6 757 aa17.08■□□□□ 0.32
CHD3-214ENST00000572579 DUPD1Q68J44 220 aa17.08■□□□□ 0.32
CHD3-214ENST00000572579 CAMKVQ8NCB2 501 aa17.08■□□□□ 0.32
CHD3-214ENST00000572579 TSLPQ969D9 159 aa17.08■□□□□ 0.32
CHD3-214ENST00000572579 FBXL8Q96CD0 374 aa17.08■□□□□ 0.32
CHD3-214ENST00000572579 MCMBPQ9BTE3 642 aa17.08■□□□□ 0.32
CHD3-214ENST00000572579 TUBB6Q9BUF5 446 aa17.08■□□□□ 0.32
CHD3-214ENST00000572579 RBCK1Q9BYM8 510 aa17.08■□□□□ 0.32
CHD3-214ENST00000572579 PPANQ9NQ55 473 aaKnown RBP17.08■□□□□ 0.32
CHD3-214ENST00000572579 ARL15Q9NXU5 204 aa17.08■□□□□ 0.32
CHD3-214ENST00000572579 STMN3Q9NZ72 180 aa17.08■□□□□ 0.32
CHD3-214ENST00000572579 SLC22A7Q9Y694 548 aa17.08■□□□□ 0.32
CHD3-214ENST00000572579 TRAV17A0A0B4J275 112 aa17.07■□□□□ 0.32
CHD3-214ENST00000572579 DYTNA2CJ06 578 aa17.07■□□□□ 0.32
CHD3-214ENST00000572579 CDC7O00311 574 aa17.07■□□□□ 0.32
CHD3-214ENST00000572579 PCDH17O14917 1159 aa17.07■□□□□ 0.32
CHD3-214ENST00000572579 TTI1O43156 1089 aa17.07■□□□□ 0.32
CHD3-214ENST00000572579 CDC123O75794 336 aaPredicted RBP17.07■□□□□ 0.32
CHD3-214ENST00000572579 GUCA1CO95843 209 aa17.07■□□□□ 0.32
CHD3-214ENST00000572579 HYAL2Q12891 473 aa17.07■□□□□ 0.32
CHD3-214ENST00000572579 ELOAQ14241 798 aaKnown RBP17.07■□□□□ 0.32
CHD3-214ENST00000572579 FRG1Q14331 258 aaKnown RBP17.07■□□□□ 0.32
CHD3-214ENST00000572579 ZNF460Q14592 562 aa17.07■□□□□ 0.32
CHD3-214ENST00000572579 PLAG1Q6DJT9 500 aa17.07■□□□□ 0.32
CHD3-214ENST00000572579 H3F3CQ6NXT2 135 aa17.07■□□□□ 0.32
CHD3-214ENST00000572579 ANKMY2Q8IV38 441 aa17.07■□□□□ 0.32
CHD3-214ENST00000572579 PDIK1LQ8N165 341 aa17.07■□□□□ 0.32
CHD3-214ENST00000572579 ANKRD49Q8WVL7 239 aa17.07■□□□□ 0.32
CHD3-214ENST00000572579 NEIL2Q969S2 332 aa17.07■□□□□ 0.32
CHD3-214ENST00000572579 PEX11GQ96HA9 241 aa17.07■□□□□ 0.32
CHD3-214ENST00000572579 PDLIM5Q96HC4 596 aaKnown RBP17.07■□□□□ 0.32
CHD3-214ENST00000572579 ANKHQ9HCJ1 492 aa17.07■□□□□ 0.32
CHD3-214ENST00000572579 OLAHQ9NV23 265 aa17.07■□□□□ 0.32
CHD3-214ENST00000572579 MOCS1Q9NZB8 636 aa17.07■□□□□ 0.32
CHD3-214ENST00000572579 CSMD1Q96PZ7 3565 aa17.07■□□□□ 0.32
CHD3-214ENST00000572579 A8MUI8 341 aa17.06■□□□□ 0.32
CHD3-214ENST00000572579 C4orf51C9J302 202 aa17.06■□□□□ 0.32
CHD3-214ENST00000572579 OR1F1O43749 312 aa17.06■□□□□ 0.32
CHD3-214ENST00000572579 GALR3O60755 368 aaPredicted RBP17.06■□□□□ 0.32
CHD3-214ENST00000572579 SEC31AO94979 1220 aaKnown RBP17.06■□□□□ 0.32
CHD3-214ENST00000572579 STSP08842 583 aa17.06■□□□□ 0.32
CHD3-214ENST00000572579 CCND1P24385 295 aa17.06■□□□□ 0.32
CHD3-214ENST00000572579 SCTRP47872 440 aa17.06■□□□□ 0.32
CHD3-214ENST00000572579 CCR8P51685 355 aa17.06■□□□□ 0.32
CHD3-214ENST00000572579 OLR1P78380 273 aa17.06■□□□□ 0.32
CHD3-214ENST00000572579 DR1Q01658 176 aa17.06■□□□□ 0.32
CHD3-214ENST00000572579 PDAP1Q13442 181 aaKnown RBP17.06■□□□□ 0.32
CHD3-214ENST00000572579 C18orf21Q32NC0 220 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms