RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 HERC3Q15034 1050 aa14.66□□□□□ -0.06
TSR1-202ENST00000571806 TRIP13Q15645 432 aaPredicted RBP14.66□□□□□ -0.06
TSR1-202ENST00000571806 CAPN13Q6MZZ7 669 aaPredicted RBP14.66□□□□□ -0.06
TSR1-202ENST00000571806 ZNF549Q6P9A3 640 aa14.66□□□□□ -0.06
TSR1-202ENST00000571806 TUBA3EQ6PEY2 450 aa14.66□□□□□ -0.06
TSR1-202ENST00000571806 ASPGQ86U10 573 aa14.66□□□□□ -0.06
TSR1-202ENST00000571806 BEST3Q8N1M1 668 aa14.66□□□□□ -0.06
TSR1-202ENST00000571806 SLC13A3Q8WWT9 602 aa14.66□□□□□ -0.06
TSR1-202ENST00000571806 MAGED4Q96JG8 741 aa14.66□□□□□ -0.06
TSR1-202ENST00000571806 LPAR4Q99677 370 aa14.66□□□□□ -0.06
TSR1-202ENST00000571806 FAM167BQ9BTA0 163 aa14.66□□□□□ -0.06
TSR1-202ENST00000571806 PARVBQ9HBI1 364 aa14.66□□□□□ -0.06
TSR1-202ENST00000571806 LZTFL1Q9NQ48 299 aa14.66□□□□□ -0.06
TSR1-202ENST00000571806 C20orf96Q9NUD7 363 aaPredicted RBP14.66□□□□□ -0.06
TSR1-202ENST00000571806 TRMT6Q9UJA5 497 aaKnown RBP14.66□□□□□ -0.06
TSR1-202ENST00000571806 FBXO5Q9UKT4 447 aa14.66□□□□□ -0.06
TSR1-202ENST00000571806 SCN2AQ99250 2005 aa14.65□□□□□ -0.06
TSR1-202ENST00000571806 ASPDHA6ND91 283 aa14.65□□□□□ -0.06
TSR1-202ENST00000571806 HIST1H2AGP0C0S8 130 aaPredicted RBP14.65□□□□□ -0.06
TSR1-202ENST00000571806 IL1RNP18510 177 aa14.65□□□□□ -0.06
TSR1-202ENST00000571806 HIST1H2ADP20671 130 aa14.65□□□□□ -0.06
TSR1-202ENST00000571806 VPS41P49754 854 aa14.65□□□□□ -0.06
TSR1-202ENST00000571806 CSNK1G2P78368 415 aa14.65□□□□□ -0.06
TSR1-202ENST00000571806 MEF2AQ02078 507 aaPredicted RBP14.65□□□□□ -0.06
TSR1-202ENST00000571806 ALDH6A1Q02252 535 aaKnown RBP14.65□□□□□ -0.06
TSR1-202ENST00000571806 NSDHLQ15738 373 aa14.65□□□□□ -0.06
TSR1-202ENST00000571806 LCTLQ6UWM7 567 aa14.65□□□□□ -0.06
TSR1-202ENST00000571806 Q6ZPB1 254 aaPredicted RBP14.65□□□□□ -0.06
TSR1-202ENST00000571806 LANCL3Q6ZV70 420 aa14.65□□□□□ -0.06
TSR1-202ENST00000571806 CPNE9Q8IYJ1 553 aa14.65□□□□□ -0.06
TSR1-202ENST00000571806 EID3Q8N140 333 aa14.65□□□□□ -0.06
TSR1-202ENST00000571806 TBC1D19Q8N5T2 526 aa14.65□□□□□ -0.06
TSR1-202ENST00000571806 MDS2Q8NDY4 140 aa14.65□□□□□ -0.06
TSR1-202ENST00000571806 SCMH1Q96GD3 660 aa14.65□□□□□ -0.06
TSR1-202ENST00000571806 HIST1H2AHQ96KK5 128 aa14.65□□□□□ -0.06
TSR1-202ENST00000571806 GPR137Q96N19 417 aa14.65□□□□□ -0.06
TSR1-202ENST00000571806 SERPINB12Q96P63 405 aa14.65□□□□□ -0.06
TSR1-202ENST00000571806 HIST1H2AJQ99878 128 aa14.65□□□□□ -0.06
TSR1-202ENST00000571806 HAUS8Q9BT25 410 aa14.65□□□□□ -0.06
TSR1-202ENST00000571806 AARSD1Q9BTE6 412 aaKnown RBP14.65□□□□□ -0.06
TSR1-202ENST00000571806 H2AFJQ9BTM1 129 aa14.65□□□□□ -0.06
TSR1-202ENST00000571806 GPAMQ9HCL2 828 aa14.65□□□□□ -0.06
TSR1-202ENST00000571806 TAS2R13Q9NYV9 303 aa14.65□□□□□ -0.06
TSR1-202ENST00000571806 HCN3Q9P1Z3 774 aa14.65□□□□□ -0.06
TSR1-202ENST00000571806 ZNF835Q9Y2P0 537 aa14.65□□□□□ -0.06
TSR1-202ENST00000571806 CSMD1Q96PZ7 3565 aa14.64□□□□□ -0.07
TSR1-202ENST00000571806 IGHV3-20A0A0C4DH32 117 aa14.64□□□□□ -0.07
TSR1-202ENST00000571806 PABPN1LA6NDY0 278 aaKnown RBP14.64□□□□□ -0.07
TSR1-202ENST00000571806 MAGEB17A8MXT2 336 aa14.64□□□□□ -0.07
TSR1-202ENST00000571806 SGK494L7N484 410 aa14.64□□□□□ -0.07
TSR1-202ENST00000571806 HAUS5O94927 633 aa14.64□□□□□ -0.07
TSR1-202ENST00000571806 JAK1P23458 1154 aa14.64□□□□□ -0.07
TSR1-202ENST00000571806 GRNP28799 593 aaKnown RBP14.64□□□□□ -0.07
TSR1-202ENST00000571806 CD96P40200 585 aa14.64□□□□□ -0.07
TSR1-202ENST00000571806 MAGEA3P43357 314 aa14.64□□□□□ -0.07
TSR1-202ENST00000571806 TERF1P54274 439 aa14.64□□□□□ -0.07
TSR1-202ENST00000571806 MPP1Q00013 466 aa14.64□□□□□ -0.07
TSR1-202ENST00000571806 PWP1Q13610 501 aa14.64□□□□□ -0.07
TSR1-202ENST00000571806 ABRAXAS2Q15018 415 aa14.64□□□□□ -0.07
TSR1-202ENST00000571806 OR1C1Q15619 314 aa14.64□□□□□ -0.07
TSR1-202ENST00000571806 ANKRD22Q5VYY1 191 aa14.64□□□□□ -0.07
TSR1-202ENST00000571806 MYO7BQ6PIF6 2116 aa14.64□□□□□ -0.07
TSR1-202ENST00000571806 PAPD4Q6PIY7 484 aaKnown RBP14.64□□□□□ -0.07
TSR1-202ENST00000571806 AGTRAPQ6RW13 159 aa14.64□□□□□ -0.07
TSR1-202ENST00000571806 PRSS41Q7RTY9 318 aa14.64□□□□□ -0.07
TSR1-202ENST00000571806 PIWIL4Q7Z3Z4 852 aaKnown RBP14.64□□□□□ -0.07
TSR1-202ENST00000571806 SLC26A11Q86WA9 606 aa14.64□□□□□ -0.07
TSR1-202ENST00000571806 SPPL2CQ8IUH8 684 aa14.64□□□□□ -0.07
TSR1-202ENST00000571806 KCT2Q8NC54 265 aa14.64□□□□□ -0.07
TSR1-202ENST00000571806 NAP1L3Q99457 506 aaPredicted RBP14.64□□□□□ -0.07
TSR1-202ENST00000571806 SARGQ9BW04 601 aa14.64□□□□□ -0.07
TSR1-202ENST00000571806 CLK4Q9HAZ1 481 aaKnown RBP14.64□□□□□ -0.07
TSR1-202ENST00000571806 PDE10AQ9Y233 779 aa14.64□□□□□ -0.07
TSR1-202ENST00000571806 NAALAD2Q9Y3Q0 740 aa14.64□□□□□ -0.07
TSR1-202ENST00000571806 MAD1L1Q9Y6D9 718 aa14.64□□□□□ -0.07
TSR1-202ENST00000571806 APCP25054 2843 aa14.63□□□□□ -0.07
TSR1-202ENST00000571806 NPPBP16860 134 aa14.63□□□□□ -0.07
TSR1-202ENST00000571806 CXCR5P32302 372 aa14.63□□□□□ -0.07
TSR1-202ENST00000571806 CCR8P51685 355 aa14.63□□□□□ -0.07
TSR1-202ENST00000571806 RHAGQ02094 409 aa14.63□□□□□ -0.07
TSR1-202ENST00000571806 SFT2D3Q587I9 215 aa14.63□□□□□ -0.07
TSR1-202ENST00000571806 HSP90AA5PQ58FG0 334 aa14.63□□□□□ -0.07
TSR1-202ENST00000571806 STRA8Q7Z7C7 330 aa14.63□□□□□ -0.07
TSR1-202ENST00000571806 GAS2L3Q86XJ1 694 aa14.63□□□□□ -0.07
TSR1-202ENST00000571806 CRLF3Q8IUI8 442 aa14.63□□□□□ -0.07
TSR1-202ENST00000571806 MYO1HQ8N1T3 1032 aa14.63□□□□□ -0.07
TSR1-202ENST00000571806 MFSD9Q8NBP5 474 aa14.63□□□□□ -0.07
TSR1-202ENST00000571806 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.63□□□□□ -0.07
TSR1-202ENST00000571806 ABHD11Q8NFV4 315 aa14.63□□□□□ -0.07
TSR1-202ENST00000571806 EEF1AKMT1Q8WVE0 214 aa14.63□□□□□ -0.07
TSR1-202ENST00000571806 MAGOHBQ96A72 148 aaKnown RBP14.63□□□□□ -0.07
TSR1-202ENST00000571806 SIGLEC12Q96PQ1 595 aa14.63□□□□□ -0.07
TSR1-202ENST00000571806 SGPP1Q9BX95 441 aa14.63□□□□□ -0.07
TSR1-202ENST00000571806 TRIM54Q9BYV2 358 aa14.63□□□□□ -0.07
TSR1-202ENST00000571806 SH3BGRL2Q9UJC5 107 aa14.63□□□□□ -0.07
TSR1-202ENST00000571806 FEZF1A0PJY2 475 aa14.62□□□□□ -0.07
TSR1-202ENST00000571806 GABRR3A8MPY1 467 aa14.62□□□□□ -0.07
TSR1-202ENST00000571806 GOLGA8MH3BSY2 632 aa14.62□□□□□ -0.07
TSR1-202ENST00000571806 LCMT2O60294 686 aaKnown RBP14.62□□□□□ -0.07
TSR1-202ENST00000571806 RDH16O75452 317 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms