RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 NDUFAF4Q9P032 175 aa16.85■□□□□ 0.29
SCARF1-205ENST00000571272 SNX8Q9Y5X2 465 aa16.85■□□□□ 0.29
SCARF1-205ENST00000571272 LAMA3Q16787 3333 aa16.85■□□□□ 0.29
SCARF1-205ENST00000571272 PRRC2BQ5JSZ5 2229 aaKnown RBP16.84■□□□□ 0.29
SCARF1-205ENST00000571272 SSX4O60224 188 aa16.84■□□□□ 0.29
SCARF1-205ENST00000571272 CDH12P55289 794 aa16.84■□□□□ 0.29
SCARF1-205ENST00000571272 ACSM2AQ08AH3 577 aa16.84■□□□□ 0.29
SCARF1-205ENST00000571272 XKR6Q5GH73 641 aa16.84■□□□□ 0.29
SCARF1-205ENST00000571272 ACSM2BQ68CK6 577 aa16.84■□□□□ 0.29
SCARF1-205ENST00000571272 PNCKQ6P2M8 343 aa16.84■□□□□ 0.29
SCARF1-205ENST00000571272 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.84■□□□□ 0.29
SCARF1-205ENST00000571272 GDPD3Q7L5L3 318 aa16.84■□□□□ 0.29
SCARF1-205ENST00000571272 ZNF605Q86T29 641 aa16.84■□□□□ 0.29
SCARF1-205ENST00000571272 DCAF4L2Q8NA75 395 aa16.84■□□□□ 0.29
SCARF1-205ENST00000571272 OR8J2Q8NGG1 315 aa16.84■□□□□ 0.29
SCARF1-205ENST00000571272 C2orf15Q8WU43 125 aaKnown RBP16.84■□□□□ 0.29
SCARF1-205ENST00000571272 DOHHQ9BU89 302 aa16.84■□□□□ 0.29
SCARF1-205ENST00000571272 HOXD1Q9GZZ0 328 aa16.84■□□□□ 0.29
SCARF1-205ENST00000571272 CLEC4EQ9ULY5 219 aa16.84■□□□□ 0.29
SCARF1-205ENST00000571272 UGT2A1Q9Y4X1 527 aa16.84■□□□□ 0.29
SCARF1-205ENST00000571272 GABRR3A8MPY1 467 aa16.84■□□□□ 0.29
SCARF1-205ENST00000571272 E9PQ18 207 aa16.84■□□□□ 0.29
SCARF1-205ENST00000571272 GCM2O75603 506 aaPredicted RBP16.84■□□□□ 0.29
SCARF1-205ENST00000571272 JUPP14923 745 aa16.84■□□□□ 0.29
SCARF1-205ENST00000571272 HKDC1Q2TB90 917 aa16.84■□□□□ 0.29
SCARF1-205ENST00000571272 RETSATQ6NUM9 610 aa16.84■□□□□ 0.29
SCARF1-205ENST00000571272 ZNF783Q6ZMS7 281 aa16.84■□□□□ 0.29
SCARF1-205ENST00000571272 NLGN4XQ8N0W4 816 aa16.84■□□□□ 0.29
SCARF1-205ENST00000571272 ZNF226Q9NYT6 803 aa16.84■□□□□ 0.29
SCARF1-205ENST00000571272 OR56A5P0C7T3 313 aa16.83■□□□□ 0.29
SCARF1-205ENST00000571272 RGS6P49758 472 aa16.83■□□□□ 0.29
SCARF1-205ENST00000571272 DGKEP52429 567 aa16.83■□□□□ 0.29
SCARF1-205ENST00000571272 PFN3P60673 137 aa16.83■□□□□ 0.29
SCARF1-205ENST00000571272 RGNQ15493 299 aa16.83■□□□□ 0.29
SCARF1-205ENST00000571272 IFNL1Q8IU54 200 aa16.83■□□□□ 0.29
SCARF1-205ENST00000571272 C2orf49Q9BVC5 232 aaPredicted RBP16.83■□□□□ 0.29
SCARF1-205ENST00000571272 MARCH7Q9H992 704 aa16.83■□□□□ 0.29
SCARF1-205ENST00000571272 C14orf119Q9NWQ9 140 aa16.83■□□□□ 0.29
SCARF1-205ENST00000571272 SH3BP4Q9P0V3 963 aa16.83■□□□□ 0.29
SCARF1-205ENST00000571272 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.83■□□□□ 0.28
SCARF1-205ENST00000571272 HAT1O14929 419 aa16.83■□□□□ 0.28
SCARF1-205ENST00000571272 MED26O95402 600 aa16.83■□□□□ 0.28
SCARF1-205ENST00000571272 ETHE1O95571 254 aa16.83■□□□□ 0.28
SCARF1-205ENST00000571272 C8GP07360 202 aa16.83■□□□□ 0.28
SCARF1-205ENST00000571272 HLA-EP13747 358 aa16.83■□□□□ 0.28
SCARF1-205ENST00000571272 ELNP15502 786 aa16.83■□□□□ 0.28
SCARF1-205ENST00000571272 CASP3P42574 277 aa16.83■□□□□ 0.28
SCARF1-205ENST00000571272 CRATP43155 626 aa16.83■□□□□ 0.28
SCARF1-205ENST00000571272 SPIBQ01892 262 aa16.83■□□□□ 0.28
SCARF1-205ENST00000571272 ZNF45Q02386 682 aa16.83■□□□□ 0.28
SCARF1-205ENST00000571272 DGKKQ5KSL6 1271 aa16.83■□□□□ 0.28
SCARF1-205ENST00000571272 CPTPQ5TA50 214 aa16.83■□□□□ 0.28
SCARF1-205ENST00000571272 CYP4Z2PQ8N1L4 340 aa16.83■□□□□ 0.28
SCARF1-205ENST00000571272 TCAIMQ8N3R3 496 aa16.83■□□□□ 0.28
SCARF1-205ENST00000571272 HJURPQ8NCD3 748 aaPredicted RBP16.83■□□□□ 0.28
SCARF1-205ENST00000571272 GPR156Q8NFN8 814 aa16.83■□□□□ 0.28
SCARF1-205ENST00000571272 DBF4BQ8NFT6 615 aa16.83■□□□□ 0.28
SCARF1-205ENST00000571272 KBTBD8Q8NFY9 601 aa16.83■□□□□ 0.28
SCARF1-205ENST00000571272 OR9Q2Q8NGE9 314 aa16.83■□□□□ 0.28
SCARF1-205ENST00000571272 PLCXD1Q9NUJ7 323 aa16.83■□□□□ 0.28
SCARF1-205ENST00000571272 KLHL3Q9UH77 587 aa16.83■□□□□ 0.28
SCARF1-205ENST00000571272 PCDHGB6Q9Y5F9 930 aa16.83■□□□□ 0.28
SCARF1-205ENST00000571272 PTTG1O95997 202 aa16.83■□□□□ 0.28
SCARF1-205ENST00000571272 HNMTP50135 292 aa16.83■□□□□ 0.28
SCARF1-205ENST00000571272 IFITM2Q01629 132 aa16.83■□□□□ 0.28
SCARF1-205ENST00000571272 C10orf62Q5T681 223 aaPredicted RBP16.83■□□□□ 0.28
SCARF1-205ENST00000571272 RGMBQ6NW40 437 aa16.83■□□□□ 0.28
SCARF1-205ENST00000571272 C1orf52Q8N6N3 182 aaKnown RBP16.83■□□□□ 0.28
SCARF1-205ENST00000571272 KCNS3Q9BQ31 491 aa16.83■□□□□ 0.28
SCARF1-205ENST00000571272 CCM2Q9BSQ5 444 aa16.83■□□□□ 0.28
SCARF1-205ENST00000571272 MS4A12Q9NXJ0 267 aa16.83■□□□□ 0.28
SCARF1-205ENST00000571272 IFT52Q9Y366 437 aa16.83■□□□□ 0.28
SCARF1-205ENST00000571272 AGAP14A8MT82 685 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 E7EQ34 232 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 J3KTA2 159 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 DYRK3O43781 588 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 BMPR1AP36894 532 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 PTSQ03393 145 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 DMC1Q14565 340 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 MED22Q15528 200 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 EXOC3L2Q2M3D2 409 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 CDKL4Q5MAI5 379 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 COX20Q5RI15 118 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 ZNF852Q6ZMS4 543 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 LGI4Q8N135 537 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 CBARPQ8N350 705 aaPredicted RBP16.82■□□□□ 0.28
SCARF1-205ENST00000571272 FOXJ1Q92949 421 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 COL21A1Q96P44 957 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 OR5M11Q96RB7 305 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 NXF2Q9GZY0 626 aaKnown RBP16.82■□□□□ 0.28
SCARF1-205ENST00000571272 IMPAD1Q9NX62 359 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 DUSP12Q9UNI6 340 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 PADI2Q9Y2J8 665 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 PCDHGA2Q9Y5H1 932 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 SCN8AQ9UQD0 1980 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 A6NL46 340 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 CTDSP2O14595 271 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 KMOO15229 486 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 ETFAP13804 333 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 PRKAR2AP13861 404 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms