RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 PDLIM2Q96JY6 352 aa11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 OLFM1Q99784 485 aa11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 LRRC4CQ9HCJ2 640 aa11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 MKL2Q9ULH7 1088 aa11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 PYCARDQ9ULZ3 195 aa11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 VWA7Q9Y334 891 aa11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 MRPS2Q9Y399 296 aaKnown RBP11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 CSAG2Q9Y5P2 127 aa11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 COPG1Q9Y678 874 aaKnown RBP11.72□□□□□ -0.53
CTDNEP1-205ENST00000570828 IGHV1-45A0A0A0MS14 117 aa11.71□□□□□ -0.53
CTDNEP1-205ENST00000570828 A0A1W2PQ72 361 aa11.71□□□□□ -0.53
CTDNEP1-205ENST00000570828 FEZF1A0PJY2 475 aa11.71□□□□□ -0.53
CTDNEP1-205ENST00000570828 SERPINA7P05543 415 aa11.71□□□□□ -0.53
CTDNEP1-205ENST00000570828 PRR35P0CG20 571 aa11.71□□□□□ -0.53
CTDNEP1-205ENST00000570828 C8orf89P0DMQ9 161 aa11.71□□□□□ -0.53
CTDNEP1-205ENST00000570828 GP1BBP13224 206 aa11.71□□□□□ -0.53
CTDNEP1-205ENST00000570828 IL1RNP18510 177 aa11.71□□□□□ -0.53
CTDNEP1-205ENST00000570828 SAT1P21673 171 aa11.71□□□□□ -0.53
CTDNEP1-205ENST00000570828 CCR8P51685 355 aa11.71□□□□□ -0.53
CTDNEP1-205ENST00000570828 AP2B1P63010 937 aa11.71□□□□□ -0.53
CTDNEP1-205ENST00000570828 MGAT5Q09328 741 aa11.71□□□□□ -0.53
CTDNEP1-205ENST00000570828 CDC16Q13042 620 aa11.71□□□□□ -0.53
CTDNEP1-205ENST00000570828 ELOAQ14241 798 aaKnown RBP11.71□□□□□ -0.53
CTDNEP1-205ENST00000570828 ZNF169Q14929 603 aaPredicted RBP11.71□□□□□ -0.53
CTDNEP1-205ENST00000570828 TLR1Q15399 786 aa11.71□□□□□ -0.53
CTDNEP1-205ENST00000570828 MINDY4Q4G0A6 757 aa11.71□□□□□ -0.53
CTDNEP1-205ENST00000570828 CRB2Q5IJ48 1285 aa11.71□□□□□ -0.53
CTDNEP1-205ENST00000570828 DUPD1Q68J44 220 aa11.71□□□□□ -0.53
CTDNEP1-205ENST00000570828 TMEM214Q6NUQ4 689 aaKnown RBP11.71□□□□□ -0.53
CTDNEP1-205ENST00000570828 PRSS41Q7RTY9 318 aa11.71□□□□□ -0.53
CTDNEP1-205ENST00000570828 TBC1D19Q8N5T2 526 aa11.71□□□□□ -0.53
CTDNEP1-205ENST00000570828 FBXO36Q8NEA4 188 aa11.71□□□□□ -0.53
CTDNEP1-205ENST00000570828 SSC4DQ8WTU2 575 aa11.71□□□□□ -0.53
CTDNEP1-205ENST00000570828 SLC13A3Q8WWT9 602 aa11.71□□□□□ -0.53
CTDNEP1-205ENST00000570828 METTL21AQ8WXB1 218 aa11.71□□□□□ -0.53
CTDNEP1-205ENST00000570828 PYCR2Q96C36 320 aa11.71□□□□□ -0.53
CTDNEP1-205ENST00000570828 FBXL8Q96CD0 374 aa11.71□□□□□ -0.53
CTDNEP1-205ENST00000570828 KRT12Q99456 494 aa11.71□□□□□ -0.53
CTDNEP1-205ENST00000570828 MACROD1Q9BQ69 325 aa11.71□□□□□ -0.53
CTDNEP1-205ENST00000570828 ANKHQ9HCJ1 492 aa11.71□□□□□ -0.53
CTDNEP1-205ENST00000570828 AGPAT4Q9NRZ5 378 aa11.71□□□□□ -0.53
CTDNEP1-205ENST00000570828 HCN3Q9P1Z3 774 aa11.71□□□□□ -0.53
CTDNEP1-205ENST00000570828 NAV2Q8IVL1 2488 aa11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 LOC102723996A0A087X1L8 192 aa11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 DYTNA2CJ06 578 aa11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 BMP10O95393 424 aa11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 GUCA1CO95843 209 aa11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 CYC1P08574 325 aa11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 NPPBP16860 134 aa11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 ZNF37AP17032 561 aaPredicted RBP11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 TSFMP43897 325 aaKnown RBP11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 XCR1P46094 333 aa11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 RPL21P46778 160 aaKnown RBP11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 PGGT1BP53609 377 aa11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 ARG2P78540 354 aa11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 FASTKD3Q14CZ7 662 aaKnown RBP11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 EIF2S3LQ2VIR3 472 aaKnown RBP11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 B3GNTL1Q67FW5 361 aaPredicted RBP11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 RIPOR1Q6ZS17 1223 aa11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 STRA8Q7Z7C7 330 aa11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 SLC26A11Q86WA9 606 aa11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 ZC3HC1Q86WB0 502 aaKnown RBP11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 ZBED8Q8IZ13 594 aa11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 MFSD9Q8NBP5 474 aa11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 KCT2Q8NC54 265 aa11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 BBOF1Q8ND07 529 aa11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 ABHD11Q8NFV4 315 aa11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 OR56A3Q8NH54 315 aa11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 PRR7Q8TB68 274 aa11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 BRIX1Q8TDN6 353 aaKnown RBP11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 PSMG3-AS1Q96PY0 264 aa11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 LMF1Q96S06 567 aa11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 VN1R1Q9GZP7 353 aa11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 ZNF700Q9H0M5 742 aa11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 NSMCE4AQ9NXX6 385 aa11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 PTGFRNQ9P2B2 879 aa11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 C19orf25Q9UFG5 118 aaPredicted RBP11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 SNX24Q9Y343 169 aa11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 PSAT1Q9Y617 370 aa11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 PCM1Q15154 2024 aa11.7□□□□□ -0.54
CTDNEP1-205ENST00000570828 SPTBN1Q01082 2364 aaKnown RBP11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 FAM95CA0A1B0GW59 222 aa11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 NPEPPSL1A6NEC2 478 aa11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 ANKUB1A6NFN9 424 aa11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 CYSRT1A8MQ03 144 aa11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 E7ESA3 106 aa11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 SGK494L7N484 410 aa11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 TP73O15350 636 aa11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 NDUFS4O43181 175 aa11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 OR1F1O43749 312 aa11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 SEMA7AO75326 666 aa11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 RDH16O75452 317 aa11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 JRKO75564 520 aa11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 KLHL18O94889 574 aa11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 SERPIND1P05546 499 aa11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 ICAM2P13598 275 aa11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 SNRPNP63162 240 aaKnown RBP11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 SKP1P63208 163 aa11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 MEF2AQ02078 507 aaPredicted RBP11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 CALCOCO2Q13137 446 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms