RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 RBCK1Q9BYM8 510 aa13.08□□□□□ -0.32
GTF3C1-211ENST00000569653 PARVBQ9HBI1 364 aa13.08□□□□□ -0.32
GTF3C1-211ENST00000569653 AGPAT4Q9NRZ5 378 aa13.08□□□□□ -0.32
GTF3C1-211ENST00000569653 RIC8BQ9NVN3 520 aa13.08□□□□□ -0.32
GTF3C1-211ENST00000569653 PSAT1Q9Y617 370 aa13.08□□□□□ -0.32
GTF3C1-211ENST00000569653 H0YIG0 161 aa13.07□□□□□ -0.32
GTF3C1-211ENST00000569653 PRPF4O43172 522 aaKnown RBP eCLIP13.07□□□□□ -0.321e-9■■■■■ 31.7
GTF3C1-211ENST00000569653 LRRTM2O43300 516 aa13.07□□□□□ -0.32
GTF3C1-211ENST00000569653 C8GP07360 202 aa13.07□□□□□ -0.32
GTF3C1-211ENST00000569653 C8orf89P0DMQ9 161 aa13.07□□□□□ -0.32
GTF3C1-211ENST00000569653 FDXRP22570 491 aa13.07□□□□□ -0.32
GTF3C1-211ENST00000569653 XCR1P46094 333 aa13.07□□□□□ -0.32
GTF3C1-211ENST00000569653 RPS15AP62244 130 aaKnown RBP13.07□□□□□ -0.32
GTF3C1-211ENST00000569653 ETF1P62495 437 aaKnown RBP13.07□□□□□ -0.32
GTF3C1-211ENST00000569653 ARG2P78540 354 aa13.07□□□□□ -0.32
GTF3C1-211ENST00000569653 PMP22Q01453 160 aa13.07□□□□□ -0.32
GTF3C1-211ENST00000569653 SP140Q13342 867 aa13.07□□□□□ -0.32
GTF3C1-211ENST00000569653 BBS9Q3SYG4 887 aa13.07□□□□□ -0.32
GTF3C1-211ENST00000569653 SPANXN3Q5MJ09 141 aa13.07□□□□□ -0.32
GTF3C1-211ENST00000569653 TEDDM1Q5T9Z0 273 aa13.07□□□□□ -0.32
GTF3C1-211ENST00000569653 FCRLBQ6BAA4 426 aa13.07□□□□□ -0.32
GTF3C1-211ENST00000569653 HIBCHQ6NVY1 386 aaPredicted RBP13.07□□□□□ -0.32
GTF3C1-211ENST00000569653 ANKRD37Q7Z713 158 aa13.07□□□□□ -0.32
GTF3C1-211ENST00000569653 KLHL7Q8IXQ5 586 aa13.07□□□□□ -0.32
GTF3C1-211ENST00000569653 AFAP1L2Q8N4X5 818 aa13.07□□□□□ -0.32
GTF3C1-211ENST00000569653 OR51Q1Q8NH59 317 aa13.07□□□□□ -0.32
GTF3C1-211ENST00000569653 HAS2Q92819 552 aa13.07□□□□□ -0.32
GTF3C1-211ENST00000569653 ALKBH8Q96BT7 664 aaKnown RBP13.07□□□□□ -0.32
GTF3C1-211ENST00000569653 CERS2Q96G23 380 aa13.07□□□□□ -0.32
GTF3C1-211ENST00000569653 CYTH2Q99418 400 aa13.07□□□□□ -0.32
GTF3C1-211ENST00000569653 AICDAQ9GZX7 198 aa13.07□□□□□ -0.32
GTF3C1-211ENST00000569653 LANCL2Q9NS86 450 aa13.07□□□□□ -0.32
GTF3C1-211ENST00000569653 CHMP2BQ9UQN3 213 aa13.07□□□□□ -0.32
GTF3C1-211ENST00000569653 PDZD2O15018 2839 aa13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 C4orf51C9J302 202 aa13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 TXNDC9O14530 226 aa13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 PCDH17O14917 1159 aa13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 ZG16O60844 167 aa13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 CXCR2P25025 360 aa13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 CASQ1P31415 396 aa13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 ELK3P41970 407 aa13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 RHAGQ02094 409 aa13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 ELOAQ14241 798 aaKnown RBP13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 FASTKD3Q14CZ7 662 aaKnown RBP13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 CATSPEREQ5SY80 951 aa13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 HECTD2Q5U5R9 776 aa13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 STEAP4Q687X5 459 aa13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 UGT3A1Q6NUS8 523 aa13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 LCTLQ6UWM7 567 aa13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 SBSNQ6UWP8 590 aa13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 SYT10Q6XYQ8 523 aa13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 RIPOR1Q6ZS17 1223 aa13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 CPEB2Q7Z5Q1 589 aaKnown RBP13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 ASPGQ86U10 573 aa13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 MFSD9Q8NBP5 474 aa13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 ABHD11Q8NFV4 315 aa13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 OR4K1Q8NGD4 311 aa13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 OR56A3Q8NH54 315 aa13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 MCOLN3Q8TDD5 553 aa13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 TSLPQ969D9 159 aa13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 CFAP36Q96G28 342 aa13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 VPS50Q96JG6 964 aa13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 TRIM51Q9BSJ1 452 aa13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 OLAHQ9NV23 265 aa13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 UTP6Q9NYH9 597 aaKnown RBP13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 TAS2R13Q9NYV9 303 aa13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 TEX264Q9Y6I9 313 aa13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 NCOA6Q14686 2063 aaPredicted RBP13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 TACC2O95359 2948 aa13.06□□□□□ -0.32
GTF3C1-211ENST00000569653 TRAV17A0A0B4J275 112 aa13.05□□□□□ -0.32
GTF3C1-211ENST00000569653 SLC16A5O15375 505 aa13.05□□□□□ -0.32
GTF3C1-211ENST00000569653 CDC123O75794 336 aaPredicted RBP13.05□□□□□ -0.32
GTF3C1-211ENST00000569653 STSP08842 583 aa13.05□□□□□ -0.32
GTF3C1-211ENST00000569653 HRH2P25021 359 aa13.05□□□□□ -0.32
GTF3C1-211ENST00000569653 AVPR1BP47901 424 aa13.05□□□□□ -0.32
GTF3C1-211ENST00000569653 OLR1P78380 273 aa13.05□□□□□ -0.32
GTF3C1-211ENST00000569653 GTF3C1Q12789 2109 aa13.05□□□□□ -0.32
GTF3C1-211ENST00000569653 ZNF460Q14592 562 aa13.05□□□□□ -0.32
GTF3C1-211ENST00000569653 MORF4L2Q15014 288 aa13.05□□□□□ -0.32
GTF3C1-211ENST00000569653 NDUFA9Q16795 377 aa13.05□□□□□ -0.32
GTF3C1-211ENST00000569653 PPP1R3AQ16821 1122 aa13.05□□□□□ -0.32
GTF3C1-211ENST00000569653 MINDY4Q4G0A6 757 aa13.05□□□□□ -0.32
GTF3C1-211ENST00000569653 C1QL3Q5VWW1 255 aa13.05□□□□□ -0.32
GTF3C1-211ENST00000569653 CAPN13Q6MZZ7 669 aaPredicted RBP13.05□□□□□ -0.32
GTF3C1-211ENST00000569653 H3F3CQ6NXT2 135 aa13.05□□□□□ -0.32
GTF3C1-211ENST00000569653 FAM180AQ6UWF9 173 aa13.05□□□□□ -0.32
GTF3C1-211ENST00000569653 KIAA0408Q6ZU52 694 aa13.05□□□□□ -0.32
GTF3C1-211ENST00000569653 GALNT7Q86SF2 657 aa13.05□□□□□ -0.32
GTF3C1-211ENST00000569653 C17orf64Q86WR6 236 aa13.05□□□□□ -0.32
GTF3C1-211ENST00000569653 MYO1HQ8N1T3 1032 aa13.05□□□□□ -0.32
GTF3C1-211ENST00000569653 BCORP1Q8N888 145 aa13.05□□□□□ -0.32
GTF3C1-211ENST00000569653 SLC13A3Q8WWT9 602 aa13.05□□□□□ -0.32
GTF3C1-211ENST00000569653 NR4A3Q92570 626 aa13.05□□□□□ -0.32
GTF3C1-211ENST00000569653 TRIM44Q96DX7 344 aaPredicted RBP13.05□□□□□ -0.32
GTF3C1-211ENST00000569653 THAP11Q96EK4 314 aa13.05□□□□□ -0.32
GTF3C1-211ENST00000569653 MAGEB10Q96LZ2 347 aaPredicted RBP13.05□□□□□ -0.32
GTF3C1-211ENST00000569653 TUBB6Q9BUF5 446 aa13.05□□□□□ -0.32
GTF3C1-211ENST00000569653 SARGQ9BW04 601 aa13.05□□□□□ -0.32
GTF3C1-211ENST00000569653 HES7Q9BYE0 225 aa13.05□□□□□ -0.32
GTF3C1-211ENST00000569653 RNF32Q9H0A6 362 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms