RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 PEX12O00623 359 aa13.81□□□□□ -0.2
COMMD4-225ENST00000569245 POLR3GO15318 223 aaPredicted RBP13.81□□□□□ -0.2
COMMD4-225ENST00000569245 BIRC5O15392 142 aa13.81□□□□□ -0.2
COMMD4-225ENST00000569245 KERAO60938 352 aa13.81□□□□□ -0.2
COMMD4-225ENST00000569245 KLF7O75840 302 aaPredicted RBP13.81□□□□□ -0.2
COMMD4-225ENST00000569245 SBK3P0C264 359 aa13.81□□□□□ -0.2
COMMD4-225ENST00000569245 MDH1P40925 334 aaKnown RBP13.81□□□□□ -0.2
COMMD4-225ENST00000569245 OR1D4P47884 311 aa13.81□□□□□ -0.2
COMMD4-225ENST00000569245 SERPINB4P48594 390 aa13.81□□□□□ -0.2
COMMD4-225ENST00000569245 ARF3P61204 181 aaPredicted RBP13.81□□□□□ -0.2
COMMD4-225ENST00000569245 SSPNQ14714 243 aa13.81□□□□□ -0.2
COMMD4-225ENST00000569245 OR4D1Q15615 310 aa13.81□□□□□ -0.2
COMMD4-225ENST00000569245 AGTRAPQ6RW13 159 aa13.81□□□□□ -0.2
COMMD4-225ENST00000569245 MBOAT1Q6ZNC8 495 aa13.81□□□□□ -0.2
COMMD4-225ENST00000569245 ATG14Q6ZNE5 492 aa13.81□□□□□ -0.2
COMMD4-225ENST00000569245 ADAMTSL2Q86TH1 951 aa13.81□□□□□ -0.2
COMMD4-225ENST00000569245 PAQR7Q86WK9 346 aa13.81□□□□□ -0.2
COMMD4-225ENST00000569245 CSNK1A1LQ8N752 337 aa13.81□□□□□ -0.2
COMMD4-225ENST00000569245 MGARPQ8TDB4 240 aa13.81□□□□□ -0.2
COMMD4-225ENST00000569245 ADAMTS17Q8TE56 1095 aa13.81□□□□□ -0.2
COMMD4-225ENST00000569245 COL26A1Q96A83 441 aa13.81□□□□□ -0.2
COMMD4-225ENST00000569245 ZNF285Q96NJ3 590 aa13.81□□□□□ -0.2
COMMD4-225ENST00000569245 PRAP1Q96NZ9 151 aa13.81□□□□□ -0.2
COMMD4-225ENST00000569245 ATOH8Q96SQ7 321 aa13.81□□□□□ -0.2
COMMD4-225ENST00000569245 TRIM55Q9BYV6 548 aa13.81□□□□□ -0.2
COMMD4-225ENST00000569245 UNKQ9C0B0 810 aaKnown RBP13.81□□□□□ -0.2
COMMD4-225ENST00000569245 PCBD2Q9H0N5 130 aa13.81□□□□□ -0.2
COMMD4-225ENST00000569245 ATG10Q9H0Y0 220 aa13.81□□□□□ -0.2
COMMD4-225ENST00000569245 ARL15Q9NXU5 204 aa13.81□□□□□ -0.2
COMMD4-225ENST00000569245 IKZF3Q9UKT9 509 aa13.81□□□□□ -0.2
COMMD4-225ENST00000569245 TP53TG5Q9Y2B4 290 aa13.81□□□□□ -0.2
COMMD4-225ENST00000569245 MAU2Q9Y6X3 613 aa13.81□□□□□ -0.2
COMMD4-225ENST00000569245 FITM1A5D6W6 292 aa13.8□□□□□ -0.2
COMMD4-225ENST00000569245 A6NL46 340 aa13.8□□□□□ -0.2
COMMD4-225ENST00000569245 G3V2L1 256 aa13.8□□□□□ -0.2
COMMD4-225ENST00000569245 CDC7O00311 574 aa13.8□□□□□ -0.2
COMMD4-225ENST00000569245 BPGMP07738 259 aa13.8□□□□□ -0.2
COMMD4-225ENST00000569245 CPA3P15088 417 aa13.8□□□□□ -0.2
COMMD4-225ENST00000569245 EZRP15311 586 aaKnown RBP13.8□□□□□ -0.2
COMMD4-225ENST00000569245 KCNC1P48547 511 aa13.8□□□□□ -0.2
COMMD4-225ENST00000569245 RRADP55042 308 aa13.8□□□□□ -0.2
COMMD4-225ENST00000569245 FOXL2P58012 376 aa13.8□□□□□ -0.2
COMMD4-225ENST00000569245 TBPL1P62380 186 aa13.8□□□□□ -0.2
COMMD4-225ENST00000569245 NAE1Q13564 534 aa13.8□□□□□ -0.2
COMMD4-225ENST00000569245 ATP1A4Q13733 1029 aa13.8□□□□□ -0.2
COMMD4-225ENST00000569245 PHKG1Q16816 387 aa13.8□□□□□ -0.2
COMMD4-225ENST00000569245 PRAMEF13Q5VWM6 474 aa13.8□□□□□ -0.2
COMMD4-225ENST00000569245 SBSNQ6UWP8 590 aa13.8□□□□□ -0.2
COMMD4-225ENST00000569245 ZYG11AQ6WRX3 759 aa13.8□□□□□ -0.2
COMMD4-225ENST00000569245 ASB18Q6ZVZ8 466 aa13.8□□□□□ -0.2
COMMD4-225ENST00000569245 OVCH1Q7RTY7 1134 aa13.8□□□□□ -0.2
COMMD4-225ENST00000569245 LRRC56Q8IYG6 542 aaPredicted RBP13.8□□□□□ -0.2
COMMD4-225ENST00000569245 CCDC63Q8NA47 563 aa13.8□□□□□ -0.2
COMMD4-225ENST00000569245 OR2Y1Q8NGV0 311 aa13.8□□□□□ -0.2
COMMD4-225ENST00000569245 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.8□□□□□ -0.2
COMMD4-225ENST00000569245 SLC25A23Q9BV35 468 aa13.8□□□□□ -0.2
COMMD4-225ENST00000569245 ALG9Q9H6U8 611 aa13.8□□□□□ -0.2
COMMD4-225ENST00000569245 MLXIPLQ9NP71 852 aa13.8□□□□□ -0.2
COMMD4-225ENST00000569245 SLC22A11Q9NSA0 550 aa13.8□□□□□ -0.2
COMMD4-225ENST00000569245 CUEDC1Q9NWM3 386 aaPredicted RBP13.8□□□□□ -0.2
COMMD4-225ENST00000569245 COPG2Q9UBF2 871 aa13.8□□□□□ -0.2
COMMD4-225ENST00000569245 G3BP2Q9UN86 482 aaKnown RBP13.8□□□□□ -0.2
COMMD4-225ENST00000569245 COL6A6A6NMZ7 2263 aa13.8□□□□□ -0.2
COMMD4-225ENST00000569245 NPEPPSL1A6NEC2 478 aa13.79□□□□□ -0.2
COMMD4-225ENST00000569245 SYCE1LA8MT33 242 aa13.79□□□□□ -0.2
COMMD4-225ENST00000569245 PYCARD-AS1I3L0S3 204 aa13.79□□□□□ -0.2
COMMD4-225ENST00000569245 HAT1O14929 419 aa13.79□□□□□ -0.2
COMMD4-225ENST00000569245 SUV39H1O43463 412 aa13.79□□□□□ -0.2
COMMD4-225ENST00000569245 GUCA1CO95843 209 aa13.79□□□□□ -0.2
COMMD4-225ENST00000569245 ALBP02768 609 aa13.79□□□□□ -0.2
COMMD4-225ENST00000569245 ENO2P09104 434 aaPredicted RBP13.79□□□□□ -0.2
COMMD4-225ENST00000569245 MYL2P10916 166 aa13.79□□□□□ -0.2
COMMD4-225ENST00000569245 ITGAXP20702 1163 aa13.79□□□□□ -0.2
COMMD4-225ENST00000569245 HRH2P25021 359 aa13.79□□□□□ -0.2
COMMD4-225ENST00000569245 GCGRP47871 477 aa13.79□□□□□ -0.2
COMMD4-225ENST00000569245 PGDP52209 483 aa13.79□□□□□ -0.2
COMMD4-225ENST00000569245 GYS2P54840 703 aa13.79□□□□□ -0.2
COMMD4-225ENST00000569245 PCLAFQ15004 111 aa13.79□□□□□ -0.2
COMMD4-225ENST00000569245 TSNQ15631 228 aaKnown RBP13.79□□□□□ -0.2
COMMD4-225ENST00000569245 MUM1Q2TAK8 710 aa13.79□□□□□ -0.2
COMMD4-225ENST00000569245 TUBB8Q3ZCM7 444 aa13.79□□□□□ -0.2
COMMD4-225ENST00000569245 ZNF425Q6IV72 752 aa13.79□□□□□ -0.2
COMMD4-225ENST00000569245 TCTN3Q6NUS6 607 aa13.79□□□□□ -0.2
COMMD4-225ENST00000569245 MRPL14Q6P1L8 145 aaKnown RBP13.79□□□□□ -0.2
COMMD4-225ENST00000569245 SHISA6Q6ZSJ9 500 aa13.79□□□□□ -0.2
COMMD4-225ENST00000569245 MED25Q71SY5 747 aa13.79□□□□□ -0.2
COMMD4-225ENST00000569245 MRGPREQ86SM8 312 aa13.79□□□□□ -0.2
COMMD4-225ENST00000569245 PLD3Q8IV08 490 aa13.79□□□□□ -0.2
COMMD4-225ENST00000569245 DTWD1Q8N5C7 304 aa13.79□□□□□ -0.2
COMMD4-225ENST00000569245 TMEM102Q8N9M5 508 aaPredicted RBP13.79□□□□□ -0.2
COMMD4-225ENST00000569245 TEX19Q8NA77 164 aa13.79□□□□□ -0.2
COMMD4-225ENST00000569245 FKBP10Q96AY3 582 aa13.79□□□□□ -0.2
COMMD4-225ENST00000569245 IP6K3Q96PC2 410 aa13.79□□□□□ -0.2
COMMD4-225ENST00000569245 PAIP2Q9BPZ3 127 aaKnown RBP13.79□□□□□ -0.2
COMMD4-225ENST00000569245 YIPF2Q9BWQ6 316 aa13.79□□□□□ -0.2
COMMD4-225ENST00000569245 ZNF304Q9HCX3 659 aa13.79□□□□□ -0.2
COMMD4-225ENST00000569245 CPSF2Q9P2I0 782 aaKnown RBP13.79□□□□□ -0.2
COMMD4-225ENST00000569245 TMCO1Q9UM00 188 aa13.79□□□□□ -0.2
COMMD4-225ENST00000569245 ANKRD12Q6UB98 2062 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 K7EM74 188 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms