RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 TRIT1Q9H3H1 467 aaKnown RBP17.43■□□□□ 0.38
SMPD3-211ENST00000568373 CD320Q9NPF0 282 aa17.43■□□□□ 0.38
SMPD3-211ENST00000568373 ATP6V1HQ9UI12 483 aa17.43■□□□□ 0.38
SMPD3-211ENST00000568373 PRUNE2Q8WUY3 3088 aa17.42■□□□□ 0.38
SMPD3-211ENST00000568373 PRR23AA6NEV1 266 aa17.42■□□□□ 0.38
SMPD3-211ENST00000568373 SAP18O00422 153 aaKnown RBP17.42■□□□□ 0.38
SMPD3-211ENST00000568373 CCNDBP1O95273 360 aa17.42■□□□□ 0.38
SMPD3-211ENST00000568373 KCNK5O95279 499 aa17.42■□□□□ 0.38
SMPD3-211ENST00000568373 CST1P01037 141 aa17.42■□□□□ 0.38
SMPD3-211ENST00000568373 EFNA1P20827 205 aaPredicted RBP17.42■□□□□ 0.38
SMPD3-211ENST00000568373 RGS19P49795 217 aa17.42■□□□□ 0.38
SMPD3-211ENST00000568373 TMEM259Q4ZIN3 620 aa17.42■□□□□ 0.38
SMPD3-211ENST00000568373 OTUD3Q5T2D3 398 aaPredicted RBP17.42■□□□□ 0.38
SMPD3-211ENST00000568373 KIAA1161Q6NSJ0 714 aa17.42■□□□□ 0.38
SMPD3-211ENST00000568373 ZCCHC8Q6NZY4 707 aaKnown RBP17.42■□□□□ 0.38
SMPD3-211ENST00000568373 FKBP9P1Q75LS8 142 aa17.42■□□□□ 0.38
SMPD3-211ENST00000568373 CHST15Q7LFX5 561 aaPredicted RBP17.42■□□□□ 0.38
SMPD3-211ENST00000568373 SATL1Q86VE3 508 aa17.42■□□□□ 0.38
SMPD3-211ENST00000568373 C17orf64Q86WR6 236 aa17.42■□□□□ 0.38
SMPD3-211ENST00000568373 METTL4Q8N3J2 472 aa17.42■□□□□ 0.38
SMPD3-211ENST00000568373 OR14C36Q8NHC7 312 aa17.42■□□□□ 0.38
SMPD3-211ENST00000568373 CYGBQ8WWM9 190 aa17.42■□□□□ 0.38
SMPD3-211ENST00000568373 REEP4Q9H6H4 257 aa17.42■□□□□ 0.38
SMPD3-211ENST00000568373 SH3BP4Q9P0V3 963 aa17.42■□□□□ 0.38
SMPD3-211ENST00000568373 SPATA7Q9P0W8 599 aa17.42■□□□□ 0.38
SMPD3-211ENST00000568373 TAC3Q9UHF0 121 aa17.42■□□□□ 0.38
SMPD3-211ENST00000568373 UTS2RQ9UKP6 389 aa17.42■□□□□ 0.38
SMPD3-211ENST00000568373 MYRFQ9Y2G1 1151 aa17.42■□□□□ 0.38
SMPD3-211ENST00000568373 A0A1W2PQU0 124 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 H3BNH8 94 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 RNASET2O00584 256 aaKnown RBP17.41■□□□□ 0.38
SMPD3-211ENST00000568373 GBAP04062 536 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 FUCA1P04066 466 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 ACP5P13686 325 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 ATP6V1B1P15313 513 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 NELFEP18615 380 aaKnown RBP17.41■□□□□ 0.38
SMPD3-211ENST00000568373 ARSFP54793 590 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 LRRC74AQ0VAA2 488 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 VMACQ2NL98 169 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 CYBRD1Q53TN4 286 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 CPZQ66K79 652 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 SDE2Q6IQ49 451 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 ERICH5Q6P6B1 374 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 VN1R5Q7Z5H4 357 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 ZZZ3Q8IYH5 903 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 EID3Q8N140 333 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 DHRSXQ8N5I4 330 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 WDR48Q8TAF3 677 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 RMND5BQ96G75 393 aaPredicted RBP17.41■□□□□ 0.38
SMPD3-211ENST00000568373 PYURFQ96I23 114 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 NRTNQ99748 197 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 BHLHE41Q9C0J9 482 aaPredicted RBP17.41■□□□□ 0.38
SMPD3-211ENST00000568373 TPT1P8Q9HAU6 139 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 A0A1B0GTW7 788 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 SMIM31A0A1B0GVY4 71 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 C1orf226A1L170 272 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 DNTTP04053 509 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 PTX3P26022 381 aaPredicted RBP17.41■□□□□ 0.38
SMPD3-211ENST00000568373 CAPGP40121 348 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 ALDH3A2P51648 485 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 DUS1LQ6P1R4 473 aaKnown RBP17.41■□□□□ 0.38
SMPD3-211ENST00000568373 ZDHHC13Q8IUH4 622 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 PGBD3Q8N328 593 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 TIMM29Q9BSF4 260 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 SLC17A9Q9BYT1 436 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 PCBD2Q9H0N5 130 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 SLC6A17Q9H1V8 727 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 EPB41L1Q9H4G0 881 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 PELI2Q9HAT8 420 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 MYNNQ9NPC7 610 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 SAMD4AQ9UPU9 718 aaKnown RBP17.41■□□□□ 0.38
SMPD3-211ENST00000568373 WDR37Q9Y2I8 494 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 GMEB1Q9Y692 573 aa17.41■□□□□ 0.38
SMPD3-211ENST00000568373 SNAP29O95721 258 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 ADPRHP54922 357 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 HTR4Q13639 388 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 PDE7AQ13946 482 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 DAG1Q14118 895 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 ZNF385BQ569K4 471 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 R3HCC1LQ7Z5L2 792 aaKnown RBP17.4■□□□□ 0.38
SMPD3-211ENST00000568373 PTOV1Q86YD1 416 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 IL17RCQ8NAC3 791 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 PNPT1Q8TCS8 783 aaKnown RBP17.4■□□□□ 0.38
SMPD3-211ENST00000568373 C16orf78Q8WTQ4 265 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 SMPDL3AQ92484 453 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 OSGEPL1Q9H4B0 414 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 CAAP1Q9H8G2 361 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 FBRSQ9HAH7 460 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 ATAD3AQ9NVI7 634 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 NDUFA13Q9P0J0 144 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 TRIOBPQ9H2D6 2365 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 G3V2T6 193 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 RNGTTO60942 597 aaKnown RBP17.4■□□□□ 0.38
SMPD3-211ENST00000568373 ADAM23O75077 832 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 KLHL18O94889 574 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 ALPLP05186 524 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 CEACAM5P06731 702 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 FURINP09958 794 aa17.4■□□□□ 0.38
SMPD3-211ENST00000568373 PPIBP23284 216 aaKnown RBP17.4■□□□□ 0.38
SMPD3-211ENST00000568373 CTHP32929 405 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms