RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 PCOLCEQ15113 449 aa13.87□□□□□ -0.19
FANCA-220ENST00000566409 NDUFA9Q16795 377 aa13.87□□□□□ -0.19
FANCA-220ENST00000566409 AGAP7PQ5VUJ5 663 aa13.87□□□□□ -0.19
FANCA-220ENST00000566409 NDUFAF7Q7L592 441 aa13.87□□□□□ -0.19
FANCA-220ENST00000566409 ASPGQ86U10 573 aa13.87□□□□□ -0.19
FANCA-220ENST00000566409 FAM26EQ8N5C1 309 aa13.87□□□□□ -0.19
FANCA-220ENST00000566409 BBOF1Q8ND07 529 aa13.87□□□□□ -0.19
FANCA-220ENST00000566409 PYROXD1Q8WU10 500 aa13.87□□□□□ -0.19
FANCA-220ENST00000566409 SLC13A3Q8WWT9 602 aa13.87□□□□□ -0.19
FANCA-220ENST00000566409 NEIL2Q969S2 332 aa13.87□□□□□ -0.19
FANCA-220ENST00000566409 VPS39Q96JC1 886 aa13.87□□□□□ -0.19
FANCA-220ENST00000566409 AGAP4Q96P64 663 aa13.87□□□□□ -0.19
FANCA-220ENST00000566409 BARD1Q99728 777 aaKnown RBP13.87□□□□□ -0.19
FANCA-220ENST00000566409 HAUS8Q9BT25 410 aa13.87□□□□□ -0.19
FANCA-220ENST00000566409 TRIM54Q9BYV2 358 aa13.87□□□□□ -0.19
FANCA-220ENST00000566409 RHOJQ9H4E5 214 aa13.87□□□□□ -0.19
FANCA-220ENST00000566409 SAYSD1Q9NPB0 183 aa13.87□□□□□ -0.19
FANCA-220ENST00000566409 MKL2Q9ULH7 1088 aa13.87□□□□□ -0.19
FANCA-220ENST00000566409 NOVA2Q9UNW9 492 aaKnown RBP13.87□□□□□ -0.19
FANCA-220ENST00000566409 MTO1Q9Y2Z2 717 aaKnown RBP13.87□□□□□ -0.19
FANCA-220ENST00000566409 PCDHGA10Q9Y5H3 936 aa13.87□□□□□ -0.19
FANCA-220ENST00000566409 ZGRF1Q86YA3 2104 aa13.87□□□□□ -0.19
FANCA-220ENST00000566409 NSG1A0A0A6YYJ2 146 aa13.86□□□□□ -0.19
FANCA-220ENST00000566409 DNAJB6O75190 326 aa13.86□□□□□ -0.19
FANCA-220ENST00000566409 PRR35P0CG20 571 aa13.86□□□□□ -0.19
FANCA-220ENST00000566409 CASQ1P31415 396 aa13.86□□□□□ -0.19
FANCA-220ENST00000566409 GPX6P59796 221 aa13.86□□□□□ -0.19
FANCA-220ENST00000566409 MRPL49Q13405 166 aaKnown RBP13.86□□□□□ -0.19
FANCA-220ENST00000566409 TSNQ15631 228 aaKnown RBP13.86□□□□□ -0.19
FANCA-220ENST00000566409 C18orf21Q32NC0 220 aaPredicted RBP13.86□□□□□ -0.19
FANCA-220ENST00000566409 SYT10Q6XYQ8 523 aa13.86□□□□□ -0.19
FANCA-220ENST00000566409 LINC00696Q6ZRV3 163 aa13.86□□□□□ -0.19
FANCA-220ENST00000566409 MAATS1Q7Z4T9 603 aa13.86□□□□□ -0.19
FANCA-220ENST00000566409 IQCKQ8N0W5 287 aa13.86□□□□□ -0.19
FANCA-220ENST00000566409 AFAP1L2Q8N4X5 818 aa13.86□□□□□ -0.19
FANCA-220ENST00000566409 NKAPQ8N5F7 415 aaKnown RBP13.86□□□□□ -0.19
FANCA-220ENST00000566409 CAMKVQ8NCB2 501 aa13.86□□□□□ -0.19
FANCA-220ENST00000566409 OR51Q1Q8NH59 317 aa13.86□□□□□ -0.19
FANCA-220ENST00000566409 ZCCHC10Q8TBK6 192 aa13.86□□□□□ -0.19
FANCA-220ENST00000566409 PPP4R1Q8TF05 950 aa13.86□□□□□ -0.19
FANCA-220ENST00000566409 ANKRD7Q92527 254 aa13.86□□□□□ -0.19
FANCA-220ENST00000566409 TM9SF4Q92544 642 aa13.86□□□□□ -0.19
FANCA-220ENST00000566409 VPS50Q96JG6 964 aa13.86□□□□□ -0.19
FANCA-220ENST00000566409 TSNARE1Q96NA8 513 aa13.86□□□□□ -0.19
FANCA-220ENST00000566409 WDR77Q9BQA1 342 aaPredicted RBP13.86□□□□□ -0.19
FANCA-220ENST00000566409 VN1R1Q9GZP7 353 aa13.86□□□□□ -0.19
FANCA-220ENST00000566409 ILKAPQ9H0C8 392 aaPredicted RBP13.86□□□□□ -0.19
FANCA-220ENST00000566409 HCN3Q9P1Z3 774 aa13.86□□□□□ -0.19
FANCA-220ENST00000566409 TCRBV9S1A1TA0A576 114 aa13.85□□□□□ -0.19
FANCA-220ENST00000566409 FAM159BA6NKW6 160 aa13.85□□□□□ -0.19
FANCA-220ENST00000566409 EIF3HO15372 352 aaKnown RBP eCLIP13.85□□□□□ -0.19
FANCA-220ENST00000566409 OR1F1O43749 312 aa13.85□□□□□ -0.19
FANCA-220ENST00000566409 RDH16O75452 317 aa13.85□□□□□ -0.19
FANCA-220ENST00000566409 CBX6O95503 412 aa13.85□□□□□ -0.19
FANCA-220ENST00000566409 B3GALT4O96024 378 aa13.85□□□□□ -0.19
FANCA-220ENST00000566409 CXCR2P25025 360 aa13.85□□□□□ -0.19
FANCA-220ENST00000566409 SOX11P35716 441 aa13.85□□□□□ -0.19
FANCA-220ENST00000566409 XCR1P46094 333 aa13.85□□□□□ -0.19
FANCA-220ENST00000566409 CALCOCO2Q13137 446 aa13.85□□□□□ -0.19
FANCA-220ENST00000566409 MFAP5Q13361 173 aa13.85□□□□□ -0.19
FANCA-220ENST00000566409 EIF2S3LQ2VIR3 472 aaKnown RBP13.85□□□□□ -0.19
FANCA-220ENST00000566409 ZDHHC24Q6UX98 284 aa13.85□□□□□ -0.19
FANCA-220ENST00000566409 ISLR2Q6UXK2 745 aa13.85□□□□□ -0.19
FANCA-220ENST00000566409 LANCL3Q6ZV70 420 aa13.85□□□□□ -0.19
FANCA-220ENST00000566409 ZNF572Q7Z3I7 529 aaPredicted RBP13.85□□□□□ -0.19
FANCA-220ENST00000566409 THOC6Q86W42 341 aaKnown RBP13.85□□□□□ -0.19
FANCA-220ENST00000566409 KBTBD2Q8IY47 623 aa13.85□□□□□ -0.19
FANCA-220ENST00000566409 SPATA6LQ8N4H0 392 aa13.85□□□□□ -0.19
FANCA-220ENST00000566409 CATSPER1Q8NEC5 780 aa13.85□□□□□ -0.19
FANCA-220ENST00000566409 OR5T3Q8NGG3 340 aa13.85□□□□□ -0.19
FANCA-220ENST00000566409 DNAJB14Q8TBM8 379 aa13.85□□□□□ -0.19
FANCA-220ENST00000566409 BRIX1Q8TDN6 353 aaKnown RBP13.85□□□□□ -0.19
FANCA-220ENST00000566409 SLC5A11Q8WWX8 675 aa13.85□□□□□ -0.19
FANCA-220ENST00000566409 ATL1Q8WXF7 558 aa13.85□□□□□ -0.19
FANCA-220ENST00000566409 IMMP1LQ96LU5 166 aa13.85□□□□□ -0.19
FANCA-220ENST00000566409 PSMG3-AS1Q96PY0 264 aa13.85□□□□□ -0.19
FANCA-220ENST00000566409 LMF1Q96S06 567 aa13.85□□□□□ -0.19
FANCA-220ENST00000566409 CYTH2Q99418 400 aa13.85□□□□□ -0.19
FANCA-220ENST00000566409 UNKQ9C0B0 810 aaKnown RBP13.85□□□□□ -0.19
FANCA-220ENST00000566409 ZNF700Q9H0M5 742 aa13.85□□□□□ -0.19
FANCA-220ENST00000566409 CAB39LQ9H9S4 337 aa13.85□□□□□ -0.19
FANCA-220ENST00000566409 GPAMQ9HCL2 828 aa13.85□□□□□ -0.19
FANCA-220ENST00000566409 SLC22A14Q9Y267 594 aa13.85□□□□□ -0.19
FANCA-220ENST00000566409 NAALAD2Q9Y3Q0 740 aa13.85□□□□□ -0.19
FANCA-220ENST00000566409 SLC22A7Q9Y694 548 aa13.85□□□□□ -0.19
FANCA-220ENST00000566409 UNC79Q9P2D8 2635 aa13.84□□□□□ -0.19
FANCA-220ENST00000566409 IGHV3-20A0A0C4DH32 117 aa13.84□□□□□ -0.19
FANCA-220ENST00000566409 TRBC2A0A5B9 178 aa13.84□□□□□ -0.19
FANCA-220ENST00000566409 ZNF860A6NHJ4 632 aa13.84□□□□□ -0.19
FANCA-220ENST00000566409 NDC80O14777 642 aa13.84□□□□□ -0.19
FANCA-220ENST00000566409 NDUFS4O43181 175 aa13.84□□□□□ -0.19
FANCA-220ENST00000566409 SEMA7AO75326 666 aa13.84□□□□□ -0.19
FANCA-220ENST00000566409 SERPINA7P05543 415 aa13.84□□□□□ -0.19
FANCA-220ENST00000566409 RNF224P0DH78 156 aa13.84□□□□□ -0.19
FANCA-220ENST00000566409 GRK3P35626 688 aa13.84□□□□□ -0.19
FANCA-220ENST00000566409 GMPRP36959 345 aa13.84□□□□□ -0.19
FANCA-220ENST00000566409 GDF5P43026 501 aa13.84□□□□□ -0.19
FANCA-220ENST00000566409 SCTRP47872 440 aa13.84□□□□□ -0.19
FANCA-220ENST00000566409 GLRBP48167 497 aa13.84□□□□□ -0.19
FANCA-220ENST00000566409 CDKL1Q00532 357 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms