RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 ZNF740Q8NDX6 193 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 OR7G3Q8NG95 312 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 OR4K1Q8NGD4 311 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 WDR20Q8TBZ3 569 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 ACTRT2Q8TDY3 377 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 RHBDD1Q8TEB9 315 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 CCDC74AQ96AQ1 378 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 TUBGCP3Q96CW5 907 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 MTFMTQ96DP5 389 aaKnown RBP10.63□□□□□ -0.71
SF3B3-205ENST00000564899 AHCYL2Q96HN2 611 aaKnown RBP10.63□□□□□ -0.71
SF3B3-205ENST00000564899 MAELQ96JY0 434 aaKnown RBP10.63□□□□□ -0.71
SF3B3-205ENST00000564899 C3orf30Q96M34 536 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 PLCD4Q9BRC7 762 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 CCDC28BQ9BUN5 200 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 PITHD1Q9GZP4 211 aaPredicted RBP10.63□□□□□ -0.71
SF3B3-205ENST00000564899 ZMYND15Q9H091 742 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 EPB41L1Q9H4G0 881 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 TMEM184CQ9NVA4 438 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 ANKMY1Q9P2S6 941 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 SNX7Q9UNH6 387 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 KLHL20Q9Y2M5 609 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 U3KQA8 63 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 BSNQ9UPA5 3926 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 IGHV1OR21-1A0A087WYE8 117 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 ATP6AP2A0A1C7CYW4 349 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 TRBC2A0A5B9 178 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 FEZF1A0PJY2 475 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 CPED1A4D0V7 1026 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 E9PBE3 544 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 HAT1O14929 419 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 ZW10O43264 779 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 RGS14O43566 566 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 KLHL41O60662 606 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 VPS4BO75351 444 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 ATP6AP2O75787 350 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 MAGP20916 626 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 CDH3P22223 829 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 GRIA3P42263 894 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 GRK6P43250 576 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 SCTRP47872 440 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 PHEXP78562 749 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 GPLD1P80108 840 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 DAB2P98082 770 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 HMGCS1Q01581 520 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 ZNF33BQ06732 778 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 TUBB3Q13509 450 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 NR6A1Q15406 480 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 PROX2Q3B8N5 592 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 LSM12Q3MHD2 195 aaKnown RBP10.62□□□□□ -0.71
SF3B3-205ENST00000564899 AMZ1Q400G9 498 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 C10orf62Q5T681 223 aaPredicted RBP10.62□□□□□ -0.71
SF3B3-205ENST00000564899 NKAIN2Q5VXU1 208 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 ADNP2Q6IQ32 1131 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 ZNF425Q6IV72 752 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 GUSBP11Q6P575 273 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 TRIM46Q7Z4K8 759 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 SPRED1Q7Z699 444 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 PAQR7Q86WK9 346 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 PLD3Q8IV08 490 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.62□□□□□ -0.71
SF3B3-205ENST00000564899 GBP7Q8N8V2 638 aaPredicted RBP10.62□□□□□ -0.71
SF3B3-205ENST00000564899 OR2T11Q8NH01 316 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 CEP70Q8NHQ1 597 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 NAT6Q93015 286 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 PPM1MQ96MI6 270 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 MTERF1Q99551 399 aaKnown RBP10.62□□□□□ -0.71
SF3B3-205ENST00000564899 ACPTQ9BZG2 426 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 ABCG4Q9H172 646 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 NT5DC2Q9H857 520 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 AKTIPQ9H8T0 292 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 EVA1BQ9NVM1 165 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 HEY2Q9UBP5 337 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 TRIM33Q9UPN9 1127 aa10.62□□□□□ -0.71
SF3B3-205ENST00000564899 SERTM1A2A2V5 107 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 OR2A25A4D2G3 310 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 EME2A4GXA9 379 aaPredicted RBP10.61□□□□□ -0.71
SF3B3-205ENST00000564899 CAPN5O15484 640 aaPredicted RBP10.61□□□□□ -0.71
SF3B3-205ENST00000564899 FLRT2O43155 660 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 B4GAT1O43505 415 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 TNFSF14O43557 240 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 OR1F1O43749 312 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 NRP2O60462 931 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 PEX11AO75192 247 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 DCTN3O75935 186 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 HSD3B1P14060 373 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 PVRP15151 417 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 PNLIPP16233 465 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 LBPP18428 481 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 HSD3B2P26439 372 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 SERPINB1P30740 379 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 BCL6P41182 706 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 PIK3CBP42338 1070 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 LSSP48449 732 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 DUSP3P51452 185 aaPredicted RBP10.61□□□□□ -0.71
SF3B3-205ENST00000564899 GFERP55789 205 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 RPS13P62277 151 aaKnown RBP10.61□□□□□ -0.71
SF3B3-205ENST00000564899 CYP4F2P78329 520 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 CSTF3Q12996 717 aaKnown RBP10.61□□□□□ -0.71
SF3B3-205ENST00000564899 ATP6AP1LQ52LC2 224 aa10.61□□□□□ -0.71
SF3B3-205ENST00000564899 PERM1Q5SV97 790 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms