RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 SNF8Q96H20 258 aa11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 ZNF354BQ96LW1 612 aa11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 OR1F2PQ96R84 312 aa11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 NDNQ99608 321 aa11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 MESP1Q9BRJ9 268 aa11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 VN1R1Q9GZP7 353 aa11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 ATG10Q9H0Y0 220 aa11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 ARL15Q9NXU5 204 aa11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 DIDO1Q9BTC0 2240 aaKnown RBP11.52□□□□□ -0.57
GTF3C1-204ENST00000564664 CENPEQ02224 2701 aa11.51□□□□□ -0.57
GTF3C1-204ENST00000564664 NDC80O14777 642 aa11.51□□□□□ -0.57
GTF3C1-204ENST00000564664 FFAR3O14843 346 aa11.51□□□□□ -0.57
GTF3C1-204ENST00000564664 GPR42O15529 346 aa11.51□□□□□ -0.57
GTF3C1-204ENST00000564664 LRRTM2O43300 516 aa11.51□□□□□ -0.57
GTF3C1-204ENST00000564664 LCMT2O60294 686 aaKnown RBP11.51□□□□□ -0.57
GTF3C1-204ENST00000564664 JRKO75564 520 aa11.51□□□□□ -0.57
GTF3C1-204ENST00000564664 CLDN1O95832 211 aa11.51□□□□□ -0.57
GTF3C1-204ENST00000564664 TSPAN12O95859 305 aa11.51□□□□□ -0.57
GTF3C1-204ENST00000564664 WDPCPO95876 746 aa11.51□□□□□ -0.57
GTF3C1-204ENST00000564664 ITGAMP11215 1152 aa11.51□□□□□ -0.57
GTF3C1-204ENST00000564664 XCR1P46094 333 aa11.51□□□□□ -0.57
GTF3C1-204ENST00000564664 CDKN2DP55273 166 aa11.51□□□□□ -0.57
GTF3C1-204ENST00000564664 MAT1AQ00266 395 aaKnown RBP11.51□□□□□ -0.57
GTF3C1-204ENST00000564664 MEF2AQ02078 507 aaPredicted RBP11.51□□□□□ -0.57
GTF3C1-204ENST00000564664 CBLBQ13191 982 aa11.51□□□□□ -0.57
GTF3C1-204ENST00000564664 SYT16Q17RD7 645 aa11.51□□□□□ -0.57
GTF3C1-204ENST00000564664 BBS9Q3SYG4 887 aa11.51□□□□□ -0.57
GTF3C1-204ENST00000564664 MINDY4Q4G0A6 757 aa11.51□□□□□ -0.57
GTF3C1-204ENST00000564664 FAM45BPQ6NSW5 357 aa11.51□□□□□ -0.57
GTF3C1-204ENST00000564664 SLC26A11Q86WA9 606 aa11.51□□□□□ -0.57
GTF3C1-204ENST00000564664 AFAP1L2Q8N4X5 818 aa11.51□□□□□ -0.57
GTF3C1-204ENST00000564664 SIRT6Q8N6T7 355 aa11.51□□□□□ -0.57
GTF3C1-204ENST00000564664 FAM45AQ8TCE6 357 aa11.51□□□□□ -0.57
GTF3C1-204ENST00000564664 NR4A3Q92570 626 aa11.51□□□□□ -0.57
GTF3C1-204ENST00000564664 RELTQ969Z4 430 aa11.51□□□□□ -0.57
GTF3C1-204ENST00000564664 FBXL8Q96CD0 374 aa11.51□□□□□ -0.57
GTF3C1-204ENST00000564664 DDX47Q9H0S4 455 aaKnown RBP11.51□□□□□ -0.57
GTF3C1-204ENST00000564664 PPANQ9NQ55 473 aaKnown RBP11.51□□□□□ -0.57
GTF3C1-204ENST00000564664 PLA2G3Q9NZ20 509 aa11.51□□□□□ -0.57
GTF3C1-204ENST00000564664 ABI3Q9P2A4 366 aa11.51□□□□□ -0.57
GTF3C1-204ENST00000564664 OSGIN2Q9Y236 505 aa11.51□□□□□ -0.57
GTF3C1-204ENST00000564664 SCN2AQ99250 2005 aa11.5□□□□□ -0.57
GTF3C1-204ENST00000564664 CACNA1DQ01668 2161 aa11.5□□□□□ -0.57
GTF3C1-204ENST00000564664 TRBC2A0A5B9 178 aa11.5□□□□□ -0.57
GTF3C1-204ENST00000564664 A1L4Q6 167 aa11.5□□□□□ -0.57
GTF3C1-204ENST00000564664 OR5H15A6NDH6 313 aa11.5□□□□□ -0.57
GTF3C1-204ENST00000564664 URADA6NGE7 173 aa11.5□□□□□ -0.57
GTF3C1-204ENST00000564664 MAGEB17A8MXT2 336 aa11.5□□□□□ -0.57
GTF3C1-204ENST00000564664 SGK494L7N484 410 aa11.5□□□□□ -0.57
GTF3C1-204ENST00000564664 PRAMEF2O60811 474 aa11.5□□□□□ -0.57
GTF3C1-204ENST00000564664 RASAL1O95294 804 aa11.5□□□□□ -0.57
GTF3C1-204ENST00000564664 F7P08709 466 aaPredicted RBP11.5□□□□□ -0.57
GTF3C1-204ENST00000564664 CDH1P12830 882 aa11.5□□□□□ -0.57
GTF3C1-204ENST00000564664 DEKP35659 375 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-204ENST00000564664 AHRP35869 848 aa11.5□□□□□ -0.57
GTF3C1-204ENST00000564664 ARL4CP56559 192 aa11.5□□□□□ -0.57
GTF3C1-204ENST00000564664 ACTN3Q08043 901 aaPredicted RBP11.5□□□□□ -0.57
GTF3C1-204ENST00000564664 CSHL1Q14406 222 aa11.5□□□□□ -0.57
GTF3C1-204ENST00000564664 PHKG1Q16816 387 aa11.5□□□□□ -0.57
GTF3C1-204ENST00000564664 MEP1AQ16819 746 aa11.5□□□□□ -0.57
GTF3C1-204ENST00000564664 MSS51Q4VC12 460 aa11.5□□□□□ -0.57
GTF3C1-204ENST00000564664 RBM20Q5T481 1227 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-204ENST00000564664 MFSD4BQ5TF39 518 aa11.5□□□□□ -0.57
GTF3C1-204ENST00000564664 HECTD2Q5U5R9 776 aa11.5□□□□□ -0.57
GTF3C1-204ENST00000564664 STEAP4Q687X5 459 aa11.5□□□□□ -0.57
GTF3C1-204ENST00000564664 HIBCHQ6NVY1 386 aaPredicted RBP11.5□□□□□ -0.57
GTF3C1-204ENST00000564664 ANKRD37Q7Z713 158 aa11.5□□□□□ -0.57
GTF3C1-204ENST00000564664 LGI4Q8N135 537 aa11.5□□□□□ -0.57
GTF3C1-204ENST00000564664 NKAPQ8N5F7 415 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-204ENST00000564664 KCT2Q8NC54 265 aa11.5□□□□□ -0.57
GTF3C1-204ENST00000564664 MAGEB10Q96LZ2 347 aaPredicted RBP11.5□□□□□ -0.57
GTF3C1-204ENST00000564664 MMP25Q9NPA2 562 aa11.5□□□□□ -0.57
GTF3C1-204ENST00000564664 RNF14Q9UBS8 474 aa11.5□□□□□ -0.57
GTF3C1-204ENST00000564664 NAALAD2Q9Y3Q0 740 aa11.5□□□□□ -0.57
GTF3C1-204ENST00000564664 FEZF1A0PJY2 475 aa11.49□□□□□ -0.57
GTF3C1-204ENST00000564664 OR1F1O43749 312 aa11.49□□□□□ -0.57
GTF3C1-204ENST00000564664 ALOX12P18054 663 aa11.49□□□□□ -0.57
GTF3C1-204ENST00000564664 IL1RNP18510 177 aa11.49□□□□□ -0.57
GTF3C1-204ENST00000564664 JAK1P23458 1154 aa11.49□□□□□ -0.57
GTF3C1-204ENST00000564664 ELK3P41970 407 aa11.49□□□□□ -0.57
GTF3C1-204ENST00000564664 HNMTP50135 292 aa11.49□□□□□ -0.57
GTF3C1-204ENST00000564664 TDGF1P3P51864 188 aa11.49□□□□□ -0.57
GTF3C1-204ENST00000564664 CDKL1Q00532 357 aa11.49□□□□□ -0.57
GTF3C1-204ENST00000564664 DR1Q01658 176 aa11.49□□□□□ -0.57
GTF3C1-204ENST00000564664 RGS1Q08116 209 aa11.49□□□□□ -0.57
GTF3C1-204ENST00000564664 ZRSR2Q15696 482 aaKnown RBP11.49□□□□□ -0.57
GTF3C1-204ENST00000564664 NSDHLQ15738 373 aa11.49□□□□□ -0.57
GTF3C1-204ENST00000564664 BTBD16Q32M84 506 aa11.49□□□□□ -0.57
GTF3C1-204ENST00000564664 ACER2Q5QJU3 275 aa11.49□□□□□ -0.57
GTF3C1-204ENST00000564664 HIST2H2BCQ6DN03 193 aa11.49□□□□□ -0.57
GTF3C1-204ENST00000564664 MTFR2Q6P444 385 aa11.49□□□□□ -0.57
GTF3C1-204ENST00000564664 ABHD13Q7L211 337 aa11.49□□□□□ -0.57
GTF3C1-204ENST00000564664 IGDCC3Q8IVU1 814 aa11.49□□□□□ -0.57
GTF3C1-204ENST00000564664 HORMAD2Q8N7B1 307 aa11.49□□□□□ -0.57
GTF3C1-204ENST00000564664 TRPV3Q8NET8 790 aa11.49□□□□□ -0.57
GTF3C1-204ENST00000564664 NT5CQ8TCD5 201 aa11.49□□□□□ -0.57
GTF3C1-204ENST00000564664 SLC5A11Q8WWX8 675 aa11.49□□□□□ -0.57
GTF3C1-204ENST00000564664 ALKBH8Q96BT7 664 aaKnown RBP11.49□□□□□ -0.57
GTF3C1-204ENST00000564664 TAAR6Q96RI8 345 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms