RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 ANXA8L1Q5VT79 327 aa14.92□□□□□ -0.02
COMMD4-210ENST00000564587 KHDRBS2Q5VWX1 349 aaKnown RBP14.92□□□□□ -0.02
COMMD4-210ENST00000564587 NANOGP8Q6NSW7 305 aa14.92□□□□□ -0.02
COMMD4-210ENST00000564587 DLEU7Q6UYE1 221 aa14.92□□□□□ -0.02
COMMD4-210ENST00000564587 COMMD6Q7Z4G1 85 aa14.92□□□□□ -0.02
COMMD4-210ENST00000564587 ADCK2Q7Z695 626 aa14.92□□□□□ -0.02
COMMD4-210ENST00000564587 C11orf74Q86VG3 221 aa14.92□□□□□ -0.02
COMMD4-210ENST00000564587 GKN2Q86XP6 184 aa14.92□□□□□ -0.02
COMMD4-210ENST00000564587 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.92□□□□□ -0.02
COMMD4-210ENST00000564587 RNF175Q8N4F7 328 aa14.92□□□□□ -0.02
COMMD4-210ENST00000564587 KRTCAP2Q8N6L1 136 aa14.92□□□□□ -0.02
COMMD4-210ENST00000564587 NATD1Q8N6N6 113 aa14.92□□□□□ -0.02
COMMD4-210ENST00000564587 EFCAB3Q8N7B9 438 aa14.92□□□□□ -0.02
COMMD4-210ENST00000564587 FRMD1Q8N878 549 aa14.92□□□□□ -0.02
COMMD4-210ENST00000564587 GOLM1Q8NBJ4 401 aa14.92□□□□□ -0.02
COMMD4-210ENST00000564587 TRPV3Q8NET8 790 aa14.92□□□□□ -0.02
COMMD4-210ENST00000564587 TNIP2Q8NFZ5 429 aa14.92□□□□□ -0.02
COMMD4-210ENST00000564587 OR4E2Q8NGC2 313 aa14.92□□□□□ -0.02
COMMD4-210ENST00000564587 CLHC1Q8NHS4 586 aa14.92□□□□□ -0.02
COMMD4-210ENST00000564587 SLC26A7Q8TE54 656 aa14.92□□□□□ -0.02
COMMD4-210ENST00000564587 GTF2H4Q92759 462 aa14.92□□□□□ -0.02
COMMD4-210ENST00000564587 ZUFSPQ96AP4 578 aa14.92□□□□□ -0.02
COMMD4-210ENST00000564587 TMEM125Q96AQ2 219 aa14.92□□□□□ -0.02
COMMD4-210ENST00000564587 SPNS1Q9H2V7 528 aa14.92□□□□□ -0.02
COMMD4-210ENST00000564587 NANOGQ9H9S0 305 aa14.92□□□□□ -0.02
COMMD4-210ENST00000564587 S100A14Q9HCY8 104 aa14.92□□□□□ -0.02
COMMD4-210ENST00000564587 MYNNQ9NPC7 610 aa14.92□□□□□ -0.02
COMMD4-210ENST00000564587 ATAD3AQ9NVI7 634 aa14.92□□□□□ -0.02
COMMD4-210ENST00000564587 APOBEC3BQ9UH17 382 aaKnown RBP14.92□□□□□ -0.02
COMMD4-210ENST00000564587 KLF15Q9UIH9 416 aa14.92□□□□□ -0.02
COMMD4-210ENST00000564587 ADAM29Q9UKF5 820 aa14.92□□□□□ -0.02
COMMD4-210ENST00000564587 FANCMQ8IYD8 2048 aa14.92□□□□□ -0.02
COMMD4-210ENST00000564587 PRORSD1PA6NEY8 169 aa14.91□□□□□ -0.02
COMMD4-210ENST00000564587 K7ESF4 209 aa14.91□□□□□ -0.02
COMMD4-210ENST00000564587 NME4O00746 187 aa14.91□□□□□ -0.02
COMMD4-210ENST00000564587 ACOT8O14734 319 aa14.91□□□□□ -0.02
COMMD4-210ENST00000564587 SCAMP2O15127 329 aaKnown RBP14.91□□□□□ -0.02
COMMD4-210ENST00000564587 OR1F1O43749 312 aa14.91□□□□□ -0.02
COMMD4-210ENST00000564587 KRT36O76013 467 aa14.91□□□□□ -0.02
COMMD4-210ENST00000564587 COX7A2P14406 83 aa14.91□□□□□ -0.02
COMMD4-210ENST00000564587 NME1P15531 152 aaKnown RBP14.91□□□□□ -0.02
COMMD4-210ENST00000564587 PSMB5P28074 263 aa14.91□□□□□ -0.02
COMMD4-210ENST00000564587 UBE2IP63279 158 aaKnown RBP14.91□□□□□ -0.02
COMMD4-210ENST00000564587 RELAQ04206 551 aa14.91□□□□□ -0.02
COMMD4-210ENST00000564587 PGS1Q32NB8 556 aa14.91□□□□□ -0.02
COMMD4-210ENST00000564587 PRRT3Q5FWE3 981 aa14.91□□□□□ -0.02
COMMD4-210ENST00000564587 C6orf10Q5SRN2 563 aa14.91□□□□□ -0.02
COMMD4-210ENST00000564587 LRIF1Q5T3J3 769 aa14.91□□□□□ -0.02
COMMD4-210ENST00000564587 CPTPQ5TA50 214 aa14.91□□□□□ -0.02
COMMD4-210ENST00000564587 ADGRF3Q8IZF5 1079 aa14.91□□□□□ -0.02
COMMD4-210ENST00000564587 TMEM132CQ8N3T6 1108 aa14.91□□□□□ -0.02
COMMD4-210ENST00000564587 ZNF740Q8NDX6 193 aa14.91□□□□□ -0.02
COMMD4-210ENST00000564587 SRFBP1Q8NEF9 429 aaKnown RBP14.91□□□□□ -0.02
COMMD4-210ENST00000564587 GPR156Q8NFN8 814 aa14.91□□□□□ -0.02
COMMD4-210ENST00000564587 DNAJB14Q8TBM8 379 aa14.91□□□□□ -0.02
COMMD4-210ENST00000564587 DNASE2BQ8WZ79 361 aa14.91□□□□□ -0.02
COMMD4-210ENST00000564587 NELL1Q92832 810 aa14.91□□□□□ -0.02
COMMD4-210ENST00000564587 RGMAQ96B86 450 aa14.91□□□□□ -0.02
COMMD4-210ENST00000564587 THAP11Q96EK4 314 aa14.91□□□□□ -0.02
COMMD4-210ENST00000564587 LRGUKQ96M69 825 aa14.91□□□□□ -0.02
COMMD4-210ENST00000564587 EBPLQ9BY08 206 aa14.91□□□□□ -0.02
COMMD4-210ENST00000564587 DUSP15Q9H1R2 295 aaPredicted RBP14.91□□□□□ -0.02
COMMD4-210ENST00000564587 OR51B5Q9H339 312 aa14.91□□□□□ -0.02
COMMD4-210ENST00000564587 CMTM6Q9NX76 183 aa14.91□□□□□ -0.02
COMMD4-210ENST00000564587 CPNE7Q9UBL6 633 aa14.91□□□□□ -0.02
COMMD4-210ENST00000564587 SPASTQ9UBP0 616 aa14.91□□□□□ -0.02
COMMD4-210ENST00000564587 ATP6V1HQ9UI12 483 aa14.91□□□□□ -0.02
COMMD4-210ENST00000564587 BDP1A6H8Y1 2624 aa14.91□□□□□ -0.02
COMMD4-210ENST00000564587 ARHGAP10A1A4S6 786 aa14.9□□□□□ -0.02
COMMD4-210ENST00000564587 H0Y3Z8 333 aa14.9□□□□□ -0.02
COMMD4-210ENST00000564587 MAP3K7O43318 606 aa14.9□□□□□ -0.02
COMMD4-210ENST00000564587 HTR1EP28566 365 aa14.9□□□□□ -0.02
COMMD4-210ENST00000564587 PXNP49023 591 aaPredicted RBP14.9□□□□□ -0.02
COMMD4-210ENST00000564587 RPS15AP62244 130 aaKnown RBP14.9□□□□□ -0.02
COMMD4-210ENST00000564587 TRA2BP62995 288 aaKnown RBP14.9□□□□□ -0.02
COMMD4-210ENST00000564587 ZXDAP98168 799 aa14.9□□□□□ -0.02
COMMD4-210ENST00000564587 TGM3Q08188 693 aa14.9□□□□□ -0.02
COMMD4-210ENST00000564587 CAPRIN1Q14444 709 aaKnown RBP14.9□□□□□ -0.02
COMMD4-210ENST00000564587 ADNP2Q6IQ32 1131 aa14.9□□□□□ -0.02
COMMD4-210ENST00000564587 ZNF425Q6IV72 752 aa14.9□□□□□ -0.02
COMMD4-210ENST00000564587 ARMCX6Q7L4S7 300 aa14.9□□□□□ -0.02
COMMD4-210ENST00000564587 VN1R5Q7Z5H4 357 aa14.9□□□□□ -0.02
COMMD4-210ENST00000564587 DHFR2Q86XF0 187 aa14.9□□□□□ -0.02
COMMD4-210ENST00000564587 KIAA2013Q8IYS2 634 aa14.9□□□□□ -0.02
COMMD4-210ENST00000564587 RNF148Q8N7C7 305 aa14.9□□□□□ -0.02
COMMD4-210ENST00000564587 POP5Q969H6 163 aaKnown RBP14.9□□□□□ -0.02
COMMD4-210ENST00000564587 COQ8BQ96D53 544 aa14.9□□□□□ -0.02
COMMD4-210ENST00000564587 HSPA12BQ96MM6 686 aa14.9□□□□□ -0.02
COMMD4-210ENST00000564587 ANKRD27Q96NW4 1050 aa14.9□□□□□ -0.02
COMMD4-210ENST00000564587 GBP5Q96PP8 586 aa14.9□□□□□ -0.02
COMMD4-210ENST00000564587 SLC39A3Q9BRY0 314 aa14.9□□□□□ -0.02
COMMD4-210ENST00000564587 DPH7Q9BTV6 452 aa14.9□□□□□ -0.02
COMMD4-210ENST00000564587 BHLHE41Q9C0J9 482 aaPredicted RBP14.9□□□□□ -0.02
COMMD4-210ENST00000564587 ALG2Q9H553 416 aa14.9□□□□□ -0.02
COMMD4-210ENST00000564587 REEP4Q9H6H4 257 aa14.9□□□□□ -0.02
COMMD4-210ENST00000564587 TM9SF3Q9HD45 589 aa14.9□□□□□ -0.02
COMMD4-210ENST00000564587 AP1M2Q9Y6Q5 423 aa14.9□□□□□ -0.02
COMMD4-210ENST00000564587 HEATR5BQ9P2D3 2071 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 PRSS51A0A1B0GVH4 220 aa14.89□□□□□ -0.03
COMMD4-210ENST00000564587 AQP12BA6NM10 295 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms