RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 POU4F1Q01851 419 aa18.91■□□□□ 0.62
SHCBP1-203ENST00000564272 FRA10AC1Q70Z53 315 aa18.91■□□□□ 0.62
SHCBP1-203ENST00000564272 THOC6Q86W42 341 aaKnown RBP18.91■□□□□ 0.62
SHCBP1-203ENST00000564272 SPATA6LQ8N4H0 392 aa18.91■□□□□ 0.62
SHCBP1-203ENST00000564272 OR4K1Q8NGD4 311 aa18.91■□□□□ 0.62
SHCBP1-203ENST00000564272 ANKRD7Q92527 254 aa18.91■□□□□ 0.62
SHCBP1-203ENST00000564272 MOCOSQ96EN8 888 aa18.91■□□□□ 0.62
SHCBP1-203ENST00000564272 C19orf60Q96EN9 201 aa18.91■□□□□ 0.62
SHCBP1-203ENST00000564272 C16orf45Q96MC5 204 aaPredicted RBP18.91■□□□□ 0.62
SHCBP1-203ENST00000564272 RBBP8Q99708 897 aa18.91■□□□□ 0.62
SHCBP1-203ENST00000564272 EGFL8Q99944 293 aa18.91■□□□□ 0.62
SHCBP1-203ENST00000564272 ILKAPQ9H0C8 392 aaPredicted RBP18.91■□□□□ 0.62
SHCBP1-203ENST00000564272 ANKHQ9HCJ1 492 aa18.91■□□□□ 0.62
SHCBP1-203ENST00000564272 TXNDC16Q9P2K2 825 aa18.91■□□□□ 0.62
SHCBP1-203ENST00000564272 CTNNAL1Q9UBT7 734 aa18.91■□□□□ 0.62
SHCBP1-203ENST00000564272 VPS4AQ9UN37 437 aa18.91■□□□□ 0.62
SHCBP1-203ENST00000564272 DYRK1BQ9Y463 629 aa18.91■□□□□ 0.62
SHCBP1-203ENST00000564272 OARD1Q9Y530 152 aa18.91■□□□□ 0.62
SHCBP1-203ENST00000564272 HECTD1Q9ULT8 2610 aa18.9■□□□□ 0.62
SHCBP1-203ENST00000564272 IGHV1-45A0A0A0MS14 117 aa18.9■□□□□ 0.62
SHCBP1-203ENST00000564272 ZNF860A6NHJ4 632 aa18.9■□□□□ 0.62
SHCBP1-203ENST00000564272 PHGDHO43175 533 aaKnown RBP18.9■□□□□ 0.62
SHCBP1-203ENST00000564272 NDUFS4O43181 175 aa18.9■□□□□ 0.62
SHCBP1-203ENST00000564272 BMP10O95393 424 aa18.9■□□□□ 0.62
SHCBP1-203ENST00000564272 CDKL1Q00532 357 aa18.9■□□□□ 0.62
SHCBP1-203ENST00000564272 REEP5Q00765 189 aa18.9■□□□□ 0.62
SHCBP1-203ENST00000564272 CAV1Q03135 178 aa18.9■□□□□ 0.62
SHCBP1-203ENST00000564272 SRSF1Q07955 248 aaKnown RBP eCLIP18.9■□□□□ 0.622e-8■■■□□ 18.5
SHCBP1-203ENST00000564272 CSHL1Q14406 222 aa18.9■□□□□ 0.62
SHCBP1-203ENST00000564272 USP10Q14694 798 aaKnown RBP18.9■□□□□ 0.62
SHCBP1-203ENST00000564272 C18orf21Q32NC0 220 aaPredicted RBP18.9■□□□□ 0.62
SHCBP1-203ENST00000564272 C3orf62Q6ZUJ4 267 aa18.9■□□□□ 0.62
SHCBP1-203ENST00000564272 NDUFAF7Q7L592 441 aa18.9■□□□□ 0.62
SHCBP1-203ENST00000564272 ADAMTSL2Q86TH1 951 aa18.9■□□□□ 0.62
SHCBP1-203ENST00000564272 CUZD1Q86UP6 607 aa18.9■□□□□ 0.62
SHCBP1-203ENST00000564272 IQCKQ8N0W5 287 aa18.9■□□□□ 0.62
SHCBP1-203ENST00000564272 AMER2Q8N7J2 671 aa18.9■□□□□ 0.62
SHCBP1-203ENST00000564272 GALNT11Q8NCW6 608 aa18.9■□□□□ 0.62
SHCBP1-203ENST00000564272 OR51Q1Q8NH59 317 aa18.9■□□□□ 0.62
SHCBP1-203ENST00000564272 CPNE1Q99829 537 aa18.9■□□□□ 0.62
SHCBP1-203ENST00000564272 WDR77Q9BQA1 342 aaPredicted RBP18.9■□□□□ 0.62
SHCBP1-203ENST00000564272 SARGQ9BW04 601 aa18.9■□□□□ 0.62
SHCBP1-203ENST00000564272 VN1R1Q9GZP7 353 aa18.9■□□□□ 0.62
SHCBP1-203ENST00000564272 SLC22A14Q9Y267 594 aa18.9■□□□□ 0.62
SHCBP1-203ENST00000564272 NAALAD2Q9Y3Q0 740 aa18.9■□□□□ 0.62
SHCBP1-203ENST00000564272 PTPN13Q12923 2485 aa18.89■□□□□ 0.61
SHCBP1-203ENST00000564272 A0A1W2PQ72 361 aa18.89■□□□□ 0.61
SHCBP1-203ENST00000564272 ESYT3A0FGR9 886 aa18.89■□□□□ 0.61
SHCBP1-203ENST00000564272 CTAGE15A4D2H0 777 aa18.89■□□□□ 0.61
SHCBP1-203ENST00000564272 KLHL18O94889 574 aa18.89■□□□□ 0.61
SHCBP1-203ENST00000564272 SERPIND1P05546 499 aa18.89■□□□□ 0.61
SHCBP1-203ENST00000564272 CELA2AP08217 269 aa18.89■□□□□ 0.61
SHCBP1-203ENST00000564272 GP5P40197 560 aa18.89■□□□□ 0.61
SHCBP1-203ENST00000564272 XCR1P46094 333 aa18.89■□□□□ 0.61
SHCBP1-203ENST00000564272 SLC7A5Q01650 507 aa18.89■□□□□ 0.61
SHCBP1-203ENST00000564272 CKAP4Q07065 602 aaKnown RBP18.89■□□□□ 0.61
SHCBP1-203ENST00000564272 PCOLCEQ15113 449 aa18.89■□□□□ 0.61
SHCBP1-203ENST00000564272 MINDY4Q4G0A6 757 aa18.89■□□□□ 0.61
SHCBP1-203ENST00000564272 MFSD4BQ5TF39 518 aa18.89■□□□□ 0.61
SHCBP1-203ENST00000564272 TMEM205Q6UW68 189 aa18.89■□□□□ 0.61
SHCBP1-203ENST00000564272 LINC00696Q6ZRV3 163 aa18.89■□□□□ 0.61
SHCBP1-203ENST00000564272 Q6ZS92 163 aa18.89■□□□□ 0.61
SHCBP1-203ENST00000564272 TMPRSS11BQ86T26 416 aa18.89■□□□□ 0.61
SHCBP1-203ENST00000564272 CTAGE6Q86UF2 777 aa18.89■□□□□ 0.61
SHCBP1-203ENST00000564272 CTAGE3PQ8IX95 158 aa18.89■□□□□ 0.61
SHCBP1-203ENST00000564272 KBTBD2Q8IY47 623 aa18.89■□□□□ 0.61
SHCBP1-203ENST00000564272 SNRNP40Q96DI7 357 aaKnown RBP18.89■□□□□ 0.61
SHCBP1-203ENST00000564272 TSPAN17Q96FV3 270 aa18.89■□□□□ 0.61
SHCBP1-203ENST00000564272 GPR22Q99680 433 aa18.89■□□□□ 0.61
SHCBP1-203ENST00000564272 RBCK1Q9BYM8 510 aa18.89■□□□□ 0.61
SHCBP1-203ENST00000564272 FAM129AQ9BZQ8 928 aa18.89■□□□□ 0.61
SHCBP1-203ENST00000564272 PHACTR1Q9C0D0 580 aa18.89■□□□□ 0.61
SHCBP1-203ENST00000564272 DERL2Q9GZP9 239 aa18.89■□□□□ 0.61
SHCBP1-203ENST00000564272 PELI2Q9HAT8 420 aa18.89■□□□□ 0.61
SHCBP1-203ENST00000564272 DOPEY2Q9Y3R5 2298 aa18.89■□□□□ 0.61
SHCBP1-203ENST00000564272 LOC102723996A0A087X1L8 192 aa18.88■□□□□ 0.61
SHCBP1-203ENST00000564272 CLEC18AA5D8T8 446 aa18.88■□□□□ 0.61
SHCBP1-203ENST00000564272 OR2W5A6NFC9 320 aa18.88■□□□□ 0.61
SHCBP1-203ENST00000564272 NCF1BA6NI72 391 aaPredicted RBP18.88■□□□□ 0.61
SHCBP1-203ENST00000564272 NCF1CA8MVU1 366 aaPredicted RBP18.88■□□□□ 0.61
SHCBP1-203ENST00000564272 FAM155BO75949 473 aa18.88■□□□□ 0.61
SHCBP1-203ENST00000564272 GSTA2P09210 222 aa18.88■□□□□ 0.61
SHCBP1-203ENST00000564272 PRR35P0CG20 571 aa18.88■□□□□ 0.61
SHCBP1-203ENST00000564272 C8orf89P0DMQ9 161 aa18.88■□□□□ 0.61
SHCBP1-203ENST00000564272 NCF1P14598 390 aaPredicted RBP18.88■□□□□ 0.61
SHCBP1-203ENST00000564272 MAGEA4P43358 317 aa18.88■□□□□ 0.61
SHCBP1-203ENST00000564272 SCTRP47872 440 aa18.88■□□□□ 0.61
SHCBP1-203ENST00000564272 UBAP2LQ14157 1087 aaKnown RBP18.88■□□□□ 0.61
SHCBP1-203ENST00000564272 EFTUD2Q15029 972 aaKnown RBP eCLIP18.88■□□□□ 0.615e-8■■■■□ 21.1
SHCBP1-203ENST00000564272 KBTBD12Q3ZCT8 623 aa18.88■□□□□ 0.61
SHCBP1-203ENST00000564272 IGFL2Q6UWQ7 119 aa18.88■□□□□ 0.61
SHCBP1-203ENST00000564272 CLEC18BQ6UXF7 455 aa18.88■□□□□ 0.61
SHCBP1-203ENST00000564272 LANCL3Q6ZV70 420 aa18.88■□□□□ 0.61
SHCBP1-203ENST00000564272 CYS1Q717R9 158 aa18.88■□□□□ 0.61
SHCBP1-203ENST00000564272 CISD2Q8N5K1 135 aaKnown RBP18.88■□□□□ 0.61
SHCBP1-203ENST00000564272 TBC1D19Q8N5T2 526 aa18.88■□□□□ 0.61
SHCBP1-203ENST00000564272 CLEC18CQ8NCF0 446 aa18.88■□□□□ 0.61
SHCBP1-203ENST00000564272 OR5T3Q8NGG3 340 aa18.88■□□□□ 0.61
SHCBP1-203ENST00000564272 BRIX1Q8TDN6 353 aaKnown RBP18.88■□□□□ 0.61
SHCBP1-203ENST00000564272 PPP4R1Q8TF05 950 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms