RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 PIH1D3Q9NQM4 214 aaKnown RBP2.49□□□□□ -2.01
HMGB1P33-201ENST00000563485 TBC1D7Q9P0N9 293 aa2.49□□□□□ -2.01
HMGB1P33-201ENST00000563485 B4GALT7Q9UBV7 327 aa2.49□□□□□ -2.01
HMGB1P33-201ENST00000563485 RPS6KA6Q9UK32 745 aa2.49□□□□□ -2.01
HMGB1P33-201ENST00000563485 TRPV2Q9Y5S1 764 aa2.49□□□□□ -2.01
HMGB1P33-201ENST00000563485 NEDD4P46934 1319 aa2.48□□□□□ -2.01
HMGB1P33-201ENST00000563485 FER1L5A0AVI2 2057 aa2.48□□□□□ -2.01
HMGB1P33-201ENST00000563485 TCRBV21S2A2A0A5A6 115 aa2.48□□□□□ -2.01
HMGB1P33-201ENST00000563485 TRIM49BA6NDI0 452 aa2.48□□□□□ -2.01
HMGB1P33-201ENST00000563485 GFPT2O94808 682 aa2.48□□□□□ -2.01
HMGB1P33-201ENST00000563485 SERPING1P05155 500 aa2.48□□□□□ -2.01
HMGB1P33-201ENST00000563485 RPLP0P05388 317 aaKnown RBP2.48□□□□□ -2.01
HMGB1P33-201ENST00000563485 F3P13726 295 aa2.48□□□□□ -2.01
HMGB1P33-201ENST00000563485 PKLRP30613 574 aa2.48□□□□□ -2.01
HMGB1P33-201ENST00000563485 NNMTP40261 264 aa2.48□□□□□ -2.01
HMGB1P33-201ENST00000563485 UBASH3AP57075 661 aa2.48□□□□□ -2.01
HMGB1P33-201ENST00000563485 ERVK-16P61578 105 aa2.48□□□□□ -2.01
HMGB1P33-201ENST00000563485 ILF2Q12905 390 aaKnown RBP2.48□□□□□ -2.01
HMGB1P33-201ENST00000563485 SNTB1Q13884 538 aaKnown RBP2.48□□□□□ -2.01
HMGB1P33-201ENST00000563485 SIX1Q15475 284 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P33-201ENST00000563485 FGD3Q5JSP0 725 aa2.48□□□□□ -2.01
HMGB1P33-201ENST00000563485 RNLSQ5VYX0 342 aa2.48□□□□□ -2.01
HMGB1P33-201ENST00000563485 CPEB2Q7Z5Q1 589 aaKnown RBP2.48□□□□□ -2.01
HMGB1P33-201ENST00000563485 C4orf32Q8N8J7 132 aa2.48□□□□□ -2.01
HMGB1P33-201ENST00000563485 CSNK1G2-AS1Q8NCQ2 148 aa2.48□□□□□ -2.01
HMGB1P33-201ENST00000563485 OR9Q2Q8NGE9 314 aa2.48□□□□□ -2.01
HMGB1P33-201ENST00000563485 ACTL8Q9H568 366 aa2.48□□□□□ -2.01
HMGB1P33-201ENST00000563485 NSMCE4AQ9NXX6 385 aa2.48□□□□□ -2.01
HMGB1P33-201ENST00000563485 IL36AQ9UHA7 158 aa2.48□□□□□ -2.01
HMGB1P33-201ENST00000563485 PILRBQ9UKJ0 227 aa2.48□□□□□ -2.01
HMGB1P33-201ENST00000563485 C17orf105B2RV13 164 aa2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 MAGEB2O15479 319 aa2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 ZNF749O43361 778 aa2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 AHCYL1O43865 530 aa2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 SH3BGRLO75368 114 aa2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 TADA2AO75478 443 aa2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 PSMD10O75832 226 aa2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 CELF2O95319 508 aaKnown RBP2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 RENP00797 406 aa2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 CD59P13987 128 aa2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 C4BPBP20851 252 aa2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 LMO2P25791 158 aa2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 GPR183P32249 361 aa2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 MC5RP33032 325 aa2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 SFTPDP35247 375 aa2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 EIF5P55010 431 aaKnown RBP2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 CSE1LP55060 971 aaKnown RBP2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 NDPQ00604 133 aa2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 POU5F1Q01860 360 aaKnown RBP2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 ACSM1Q08AH1 577 aa2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 RALGDSQ12967 914 aa2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 ALCAMQ13740 583 aa2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 FHL5Q5TD97 284 aa2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 IQCHQ86VS3 1027 aa2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 CCDC60Q8IWA6 550 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 AVL9Q8NBF6 648 aa2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 OR4Q3Q8NH05 313 aa2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 CYYR1Q96J86 154 aa2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 CCDC68Q9H2F9 335 aa2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 IL1RAPQ9NPH3 570 aa2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 ZNF581Q9P0T4 197 aa2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 PRO0461Q9UI25 63 aa2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 PILRAQ9UKJ1 303 aa2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 POMT2Q9UKY4 750 aa2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 MRPS18CQ9Y3D5 142 aaKnown RBP2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 FAM169AQ9Y6X4 670 aa2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 KIF25-AS1Q9Y6Z4 181 aa2.47□□□□□ -2.01
HMGB1P33-201ENST00000563485 IL16Q14005 1332 aa2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 NPHP3Q7Z494 1330 aa2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 hCG_38984A0A1B0GV85 526 aa2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 A0A1W2PQ72 361 aa2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 F8VVB4 439 aa2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 F8VWA3 439 aa2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 PDHXO00330 501 aa2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 MTRF1O75570 445 aaKnown RBP2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 THY1P04216 161 aa2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 ADORA3P0DMS8 318 aa2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 EEF1B2P24534 225 aaKnown RBP2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 DUTP33316 252 aaKnown RBP2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 GSK3BP49841 420 aa2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 LIMK1P53667 647 aa2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 SRPXP78539 464 aa2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 DLK1P80370 383 aa2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 RBPJQ06330 500 aa2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 PTGISQ16647 500 aa2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 LACTB2Q53H82 288 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 PRR30Q53SZ7 412 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 C9orf66Q5T8R8 295 aa2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 AGAP7PQ5VUJ5 663 aa2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 SUSD4Q5VX71 490 aa2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 LEMD1Q68G75 181 aa2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 KRT39Q6A163 491 aa2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 FAM166AQ6J272 317 aa2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 PRSS55Q6UWB4 352 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 KRTAP5-5Q701N2 237 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 TLK2Q86UE8 772 aa2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 AGAP11Q8TF27 550 aa2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 C11orf52Q96A22 123 aa2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 NXPE2Q96DL1 559 aa2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 RIMS4Q9H426 269 aaPredicted RBP2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms