RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 CCDC51Q96ER9 411 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 EPSTI1Q96J88 318 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 ZNF396Q96N95 335 aaPredicted RBP4.63□□□□□ -1.67
LINC00254-201ENST00000563416 CASD1Q96PB1 797 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 GBP5Q96PP8 586 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 GCNAQ96QF7 691 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 TGS1Q96RS0 853 aaKnown RBP4.63□□□□□ -1.67
LINC00254-201ENST00000563416 ABHD1Q96SE0 405 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 SEPT5Q99719 369 aaPredicted RBP4.63□□□□□ -1.67
LINC00254-201ENST00000563416 KLHL4Q9C0H6 718 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 FZD8Q9H461 694 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 MAGIXQ9H6Y5 334 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 POLR1BQ9H9Y6 1135 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 PRMT7Q9NVM4 692 aaPredicted RBP4.63□□□□□ -1.67
LINC00254-201ENST00000563416 ODF2LQ9ULJ1 636 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 PPIEQ9UNP9 301 aaKnown RBP4.63□□□□□ -1.67
LINC00254-201ENST00000563416 PIN4Q9Y237 131 aaKnown RBP4.63□□□□□ -1.67
LINC00254-201ENST00000563416 DLGAP4Q9Y2H0 992 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 OR2W1Q9Y3N9 320 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 BDP1A6H8Y1 2624 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 PHLPP2Q6ZVD8 1323 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 MYO10Q9HD67 2058 aa4.63□□□□□ -1.67
LINC00254-201ENST00000563416 CUL9Q8IWT3 2517 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 LOC100509620A0A075B734 347 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 A0A1B0GUA9 196 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 hCG_1809904A0A1W2PP81 198 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 A0A1W2PPE2 198 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 A0A1W2PR64 198 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 C1orf226A1L170 272 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 LRRIQ4A6NIV6 560 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 B4GALT5O43286 388 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 HCRTR2O43614 444 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 ERLIN2O94905 339 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 ABCB1P08183 1280 aaPredicted RBP4.62□□□□□ -1.67
LINC00254-201ENST00000563416 PLA2G4BP0C869 781 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 FOSL2P15408 326 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 ARF4P18085 180 aaPredicted RBP4.62□□□□□ -1.67
LINC00254-201ENST00000563416 SP100P23497 879 aaPredicted RBP4.62□□□□□ -1.67
LINC00254-201ENST00000563416 MARCKSP29966 332 aaPredicted RBP4.62□□□□□ -1.67
LINC00254-201ENST00000563416 PIK3CAP42336 1068 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 MFAP4P55083 255 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 PEX3P56589 373 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 ISL1P61371 349 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 CEBPZQ03701 1054 aaKnown RBP4.62□□□□□ -1.67
LINC00254-201ENST00000563416 BTG3Q14201 252 aaPredicted RBP4.62□□□□□ -1.67
LINC00254-201ENST00000563416 STK38Q15208 465 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 MAPK6Q16659 721 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 ASTE1Q2TB18 679 aaPredicted RBP4.62□□□□□ -1.67
LINC00254-201ENST00000563416 EPC2Q52LR7 807 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 TWF2Q6IBS0 349 aaKnown RBP4.62□□□□□ -1.67
LINC00254-201ENST00000563416 PLBD1Q6P4A8 553 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 NOTUMQ6P988 496 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 SLC27A1Q6PCB7 646 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 DCLRE1AQ6PJP8 1040 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 PLEKHM3Q6ZWE6 761 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 NFE4Q86UQ8 179 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 NRROSQ86YC3 692 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 CEP97Q8IW35 865 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 ZBTB8OSQ8IWT0 167 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 HACE1Q8IYU2 909 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 CCAR2Q8N163 923 aaKnown RBP4.62□□□□□ -1.67
LINC00254-201ENST00000563416 LRRC43Q8N309 656 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 CNNM3Q8NE01 707 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 OR1J2Q8NGS2 313 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 OR5R1Q8NH85 324 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 HMGCLL1Q8TB92 370 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 SLC38A5Q8WUX1 472 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 DEPDC1BQ8WUY9 529 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 ARNTL2Q8WYA1 636 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 FAM162AQ96A26 154 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 RHBDF1Q96CC6 855 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 RMDN1Q96DB5 314 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 IFT74Q96LB3 600 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 WDFY2Q96P53 400 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 SPAG5Q96R06 1193 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 PLIN2Q99541 437 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 TMEM117Q9H0C3 514 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 CWH43Q9H720 699 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 PFDN4Q9NQP4 134 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 C5AR2Q9P296 337 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 FBXW11Q9UKB1 542 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 MTCH2Q9Y6C9 303 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 PATJQ8NI35 1801 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 NUP210Q8TEM1 1887 aaPredicted RBP4.62□□□□□ -1.67
LINC00254-201ENST00000563416 HELZP42694 1942 aaKnown RBP4.62□□□□□ -1.67
LINC00254-201ENST00000563416 ANAPC1Q9H1A4 1944 aa4.62□□□□□ -1.67
LINC00254-201ENST00000563416 TRIOO75962 3097 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 EIF4E1BA6NMX2 242 aaKnown RBP4.61□□□□□ -1.67
LINC00254-201ENST00000563416 ANKRD28O15084 1053 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 SLC7A4O43246 635 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 SLU7O95391 586 aaKnown RBP4.61□□□□□ -1.67
LINC00254-201ENST00000563416 SP1P08047 785 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 FAM106CPP0CH98 169 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 SELLP14151 372 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 ZNF23P17027 643 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 UGT1A1P22309 533 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 CTNNB1P35222 781 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 GP5P40197 560 aa4.61□□□□□ -1.67
LINC00254-201ENST00000563416 APOBEC1P41238 236 aaKnown RBP4.61□□□□□ -1.67
LINC00254-201ENST00000563416 CLDN20P56880 219 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms