RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 CDH1P12830 882 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 AMD1P17707 334 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 DDX5P17844 614 aaKnown RBP9.32□□□□□ -0.92
UBFD1-202ENST00000563366 XRCC1P18887 633 aaPredicted RBP9.32□□□□□ -0.92
UBFD1-202ENST00000563366 PRPS1L1P21108 318 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 PTX3P26022 381 aaPredicted RBP9.32□□□□□ -0.92
UBFD1-202ENST00000563366 CMPK1P30085 196 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 RPL3P39023 403 aaKnown RBP9.32□□□□□ -0.92
UBFD1-202ENST00000563366 GSTM5P46439 218 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 MTTPP55157 894 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 PRDX1Q06830 199 aaKnown RBP9.32□□□□□ -0.92
UBFD1-202ENST00000563366 SIGLEC14Q08ET2 396 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 LRRC74AQ0VAA2 488 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 DDX39BQ13838 428 aaKnown RBP9.32□□□□□ -0.92
UBFD1-202ENST00000563366 FZD2Q14332 565 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 KIR2DS3Q14952 304 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 KIAA0040Q15053 153 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 ELOCQ15369 112 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 RNFT1Q5M7Z0 435 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 CATSPEREQ5SY80 951 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 PRAMEF9Q5VWM5 478 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 NOXRED1Q6NXP6 359 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 DUS1LQ6P1R4 473 aaKnown RBP9.32□□□□□ -0.92
UBFD1-202ENST00000563366 MSANTD1Q6ZTZ1 278 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 AMIGO1Q86WK6 493 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 FUNDC1Q8IVP5 155 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 LIX1Q8N485 282 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 OR9I1Q8NGQ6 314 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 HUS1BQ8NHY5 278 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 FBXO27Q8NI29 283 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 LCN9Q8WX39 176 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 RLN3Q8WXF3 142 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 TESCQ96BS2 214 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 MTFMTQ96DP5 389 aaKnown RBP9.32□□□□□ -0.92
UBFD1-202ENST00000563366 SLC6A18Q96N87 628 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 IL17FQ96PD4 163 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 MTERF1Q99551 399 aaKnown RBP9.32□□□□□ -0.92
UBFD1-202ENST00000563366 RHBGQ9H310 441 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 RMND5AQ9H871 391 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 DMRT3Q9NQL9 472 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 PRDM6Q9NQX0 595 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 C2orf42Q9NWW7 574 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 SIRT5Q9NXA8 310 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 APOBEC3BQ9UH17 382 aaKnown RBP9.32□□□□□ -0.92
UBFD1-202ENST00000563366 CROTQ9UKG9 612 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 PLAGL1Q9UM63 463 aa9.32□□□□□ -0.92
UBFD1-202ENST00000563366 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.32□□□□□ -0.92
UBFD1-202ENST00000563366 A0A088AWK7 358 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 MAGEB17A8MXT2 336 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 K7ESF4 209 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 ANKRD28O15084 1053 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 DNAJA2O60884 412 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 VIPP01282 170 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 CSF2P04141 144 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 BCKDHAP12694 445 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 NME1P15531 152 aaKnown RBP9.31□□□□□ -0.92
UBFD1-202ENST00000563366 CAPN3P20807 821 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 AK4P27144 223 aaPredicted RBP9.31□□□□□ -0.92
UBFD1-202ENST00000563366 NEK2P51955 445 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 ARFIP1P53367 373 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 CLDN8P56748 225 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 C21orf58P58505 322 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 PSME3P61289 254 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 UFM1P61960 85 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 HNRNPKP61978 463 aaKnown RBP eCLIP9.31□□□□□ -0.927e-7■□□□□ 11
UBFD1-202ENST00000563366 ZXDAP98168 799 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 REEP5Q00765 189 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 EIF2B5Q13144 721 aaKnown RBP9.31□□□□□ -0.92
UBFD1-202ENST00000563366 PLCL1Q15111 1095 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 SNCBQ16143 134 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 SAMD4BQ5PRF9 694 aaKnown RBP9.31□□□□□ -0.92
UBFD1-202ENST00000563366 TPRG1LQ5T0D9 272 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 C1orf146Q5VVC0 180 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 GALNT18Q6P9A2 607 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 IYDQ6PHW0 289 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 PAGE2Q7Z2X7 111 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 TAF8Q7Z7C8 310 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 SLC9B2Q86UD5 537 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 GKN2Q86XP6 184 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 FAM129CQ86XR2 697 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 SYT12Q8IV01 421 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 FBXW8Q8N3Y1 598 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 MINDY1Q8N5J2 469 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 DPP10Q8N608 796 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 LINC01555Q8NAE3 123 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 OR4K1Q8NGD4 311 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 OR2A1Q8NGT9 310 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 HSPA12BQ96MM6 686 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 QRFPRQ96P65 431 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 PRPF18Q99633 342 aaKnown RBP9.31□□□□□ -0.92
UBFD1-202ENST00000563366 NPAS2Q99743 824 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 ORAI3Q9BRQ5 295 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 ACAT2Q9BWD1 397 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 DUSP15Q9H1R2 295 aaPredicted RBP9.31□□□□□ -0.92
UBFD1-202ENST00000563366 SRMSQ9H3Y6 488 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 CLMPQ9H6B4 373 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 DCLRE1BQ9H816 532 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 LIN7BQ9HAP6 207 aa9.31□□□□□ -0.92
UBFD1-202ENST00000563366 MRPS30Q9NP92 439 aaKnown RBP9.31□□□□□ -0.92
UBFD1-202ENST00000563366 TMEM184CQ9NVA4 438 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms