RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 CAPS2Q9BXY5 557 aa15.76■□□□□ 0.11
CDT1-202ENST00000562747 SLC26A1Q9H2B4 701 aa15.76■□□□□ 0.11
CDT1-202ENST00000562747 ALG9Q9H6U8 611 aa15.76■□□□□ 0.11
CDT1-202ENST00000562747 WWOXQ9NZC7 414 aa15.76■□□□□ 0.11
CDT1-202ENST00000562747 NUDT4Q9NZJ9 180 aa15.76■□□□□ 0.11
CDT1-202ENST00000562747 CD274Q9NZQ7 290 aa15.76■□□□□ 0.11
CDT1-202ENST00000562747 CDC14AQ9UNH5 594 aa15.76■□□□□ 0.11
CDT1-202ENST00000562747 SHANK1Q9Y566 2161 aa15.76■□□□□ 0.11
CDT1-202ENST00000562747 TRBC2A0A5B9 178 aa15.75■□□□□ 0.11
CDT1-202ENST00000562747 FEZF1A0PJY2 475 aa15.75■□□□□ 0.11
CDT1-202ENST00000562747 TAPBPO15533 448 aa15.75■□□□□ 0.11
CDT1-202ENST00000562747 P2RX6O15547 441 aa15.75■□□□□ 0.11
CDT1-202ENST00000562747 PRPF4O43172 522 aaKnown RBP eCLIP15.75■□□□□ 0.11
CDT1-202ENST00000562747 LCMT2O60294 686 aaKnown RBP15.75■□□□□ 0.11
CDT1-202ENST00000562747 KLHL2O95198 593 aa15.75■□□□□ 0.11
CDT1-202ENST00000562747 BCL6P41182 706 aa15.75■□□□□ 0.11
CDT1-202ENST00000562747 FOLR3P41439 243 aa15.75■□□□□ 0.11
CDT1-202ENST00000562747 IRF9Q00978 393 aa15.75■□□□□ 0.11
CDT1-202ENST00000562747 CHAF1BQ13112 559 aa15.75■□□□□ 0.11
CDT1-202ENST00000562747 FAM53BQ14153 422 aa15.75■□□□□ 0.11
CDT1-202ENST00000562747 SLC9A5Q14940 896 aa15.75■□□□□ 0.11
CDT1-202ENST00000562747 ACAP2Q15057 778 aa15.75■□□□□ 0.11
CDT1-202ENST00000562747 C18orf21Q32NC0 220 aaPredicted RBP15.75■□□□□ 0.11
CDT1-202ENST00000562747 CATSPEREQ5SY80 951 aa15.75■□□□□ 0.11
CDT1-202ENST00000562747 LGSNQ5TDP6 509 aa15.75■□□□□ 0.11
CDT1-202ENST00000562747 KLC3Q6P597 504 aa15.75■□□□□ 0.11
CDT1-202ENST00000562747 NXPE4Q6UWF7 544 aa15.75■□□□□ 0.11
CDT1-202ENST00000562747 COX15Q7KZN9 410 aa15.75■□□□□ 0.11
CDT1-202ENST00000562747 APLFQ8IW19 511 aaPredicted RBP15.75■□□□□ 0.11
CDT1-202ENST00000562747 GSPT2Q8IYD1 628 aaKnown RBP15.75■□□□□ 0.11
CDT1-202ENST00000562747 CNPY4Q8N129 248 aa15.75■□□□□ 0.11
CDT1-202ENST00000562747 MFSD9Q8NBP5 474 aa15.75■□□□□ 0.11
CDT1-202ENST00000562747 CAMKVQ8NCB2 501 aa15.75■□□□□ 0.11
CDT1-202ENST00000562747 OR2Y1Q8NGV0 311 aa15.75■□□□□ 0.11
CDT1-202ENST00000562747 TM4SF19Q96DZ7 209 aa15.75■□□□□ 0.11
CDT1-202ENST00000562747 TSNARE1Q96NA8 513 aa15.75■□□□□ 0.11
CDT1-202ENST00000562747 TMEM79Q9BSE2 394 aa15.75■□□□□ 0.11
CDT1-202ENST00000562747 WDR54Q9H977 334 aa15.75■□□□□ 0.11
CDT1-202ENST00000562747 ZNF304Q9HCX3 659 aa15.75■□□□□ 0.11
CDT1-202ENST00000562747 GPRC5BQ9NZH0 403 aa15.75■□□□□ 0.11
CDT1-202ENST00000562747 PLEKHB1Q9UF11 243 aaPredicted RBP15.75■□□□□ 0.11
CDT1-202ENST00000562747 FETUBQ9UGM5 382 aa15.75■□□□□ 0.11
CDT1-202ENST00000562747 PTBP2Q9UKA9 531 aaKnown RBP15.75■□□□□ 0.11
CDT1-202ENST00000562747 NXT1Q9UKK6 140 aaKnown RBP15.75■□□□□ 0.11
CDT1-202ENST00000562747 PTRH2Q9Y3E5 179 aaKnown RBP15.75■□□□□ 0.11
CDT1-202ENST00000562747 SYCE1LA8MT33 242 aa15.74■□□□□ 0.11
CDT1-202ENST00000562747 CNOT3O75175 753 aaKnown RBP15.74■□□□□ 0.11
CDT1-202ENST00000562747 MYBL2P10244 700 aa15.74■□□□□ 0.11
CDT1-202ENST00000562747 GNAZP19086 355 aa15.74■□□□□ 0.11
CDT1-202ENST00000562747 GDF5P43026 501 aa15.74■□□□□ 0.11
CDT1-202ENST00000562747 OR1D4P47884 311 aa15.74■□□□□ 0.11
CDT1-202ENST00000562747 KCNC1P48547 511 aa15.74■□□□□ 0.11
CDT1-202ENST00000562747 REEP5Q00765 189 aa15.74■□□□□ 0.11
CDT1-202ENST00000562747 MEF2AQ02078 507 aaPredicted RBP15.74■□□□□ 0.11
CDT1-202ENST00000562747 CDC16Q13042 620 aa15.74■□□□□ 0.11
CDT1-202ENST00000562747 SLC29A2Q14542 456 aa15.74■□□□□ 0.11
CDT1-202ENST00000562747 SSPNQ14714 243 aa15.74■□□□□ 0.11
CDT1-202ENST00000562747 NADK2Q4G0N4 442 aa15.74■□□□□ 0.11
CDT1-202ENST00000562747 TMPRSS11BQ86T26 416 aa15.74■□□□□ 0.11
CDT1-202ENST00000562747 ASPGQ86U10 573 aa15.74■□□□□ 0.11
CDT1-202ENST00000562747 RAB43Q86YS6 212 aa15.74■□□□□ 0.11
CDT1-202ENST00000562747 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.74■□□□□ 0.11
CDT1-202ENST00000562747 SLC13A3Q8WWT9 602 aa15.74■□□□□ 0.11
CDT1-202ENST00000562747 AIF1LQ9BQI0 150 aa15.74■□□□□ 0.11
CDT1-202ENST00000562747 DRC3Q9H069 523 aa15.74■□□□□ 0.11
CDT1-202ENST00000562747 MAU2Q9Y6X3 613 aa15.74■□□□□ 0.11
CDT1-202ENST00000562747 SUPT3HB4E1H0 165 aa15.73■□□□□ 0.11
CDT1-202ENST00000562747 OR1F1O43749 312 aa15.73■□□□□ 0.11
CDT1-202ENST00000562747 SUPT3HO75486 399 aa15.73■□□□□ 0.11
CDT1-202ENST00000562747 STK16O75716 305 aa15.73■□□□□ 0.11
CDT1-202ENST00000562747 AGFG2O95081 481 aa15.73■□□□□ 0.11
CDT1-202ENST00000562747 SNRPAP09012 282 aaKnown RBP15.73■□□□□ 0.11
CDT1-202ENST00000562747 SLC35G6P0C7Q6 338 aa15.73■□□□□ 0.11
CDT1-202ENST00000562747 CXCR2P25025 360 aa15.73■□□□□ 0.11
CDT1-202ENST00000562747 AHRP35869 848 aa15.73■□□□□ 0.11
CDT1-202ENST00000562747 HSPA7P48741 367 aa15.73■□□□□ 0.11
CDT1-202ENST00000562747 NKG7Q16617 165 aa15.73■□□□□ 0.11
CDT1-202ENST00000562747 FAM69BQ5VUD6 431 aa15.73■□□□□ 0.11
CDT1-202ENST00000562747 TMEM214Q6NUQ4 689 aaKnown RBP15.73■□□□□ 0.11
CDT1-202ENST00000562747 ADGRD1Q6QNK2 874 aa15.73■□□□□ 0.11
CDT1-202ENST00000562747 DTWD1Q8N5C7 304 aa15.73■□□□□ 0.11
CDT1-202ENST00000562747 METTL27Q8N6F8 245 aaPredicted RBP15.73■□□□□ 0.11
CDT1-202ENST00000562747 GALNT11Q8NCW6 608 aa15.73■□□□□ 0.11
CDT1-202ENST00000562747 CPT1CQ8TCG5 803 aa15.73■□□□□ 0.11
CDT1-202ENST00000562747 EXT2Q93063 718 aa15.73■□□□□ 0.11
CDT1-202ENST00000562747 MTBPQ96DY7 904 aa15.73■□□□□ 0.11
CDT1-202ENST00000562747 GPR78Q96P69 363 aa15.73■□□□□ 0.11
CDT1-202ENST00000562747 IP6K3Q96PC2 410 aa15.73■□□□□ 0.11
CDT1-202ENST00000562747 VPS11Q9H270 941 aa15.73■□□□□ 0.11
CDT1-202ENST00000562747 EPB41L4BQ9H329 900 aa15.73■□□□□ 0.11
CDT1-202ENST00000562747 ANKZF1Q9H8Y5 726 aa15.73■□□□□ 0.11
CDT1-202ENST00000562747 DNAJC11Q9NVH1 559 aa15.73■□□□□ 0.11
CDT1-202ENST00000562747 ZFP69BQ9UJL9 534 aa15.73■□□□□ 0.11
CDT1-202ENST00000562747 PCSK5Q92824 1860 aa15.73■□□□□ 0.11
CDT1-202ENST00000562747 MYO9AB2RTY4 2548 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 MED13Q9UHV7 2174 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 IGLV3-12A0A075B6K2 115 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 VSTM2BA6NLU5 285 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 TTLL8A6PVC2 850 aa15.72■□□□□ 0.11
CDT1-202ENST00000562747 TRIM49D1C9J1S8 452 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms