RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 AK4P27144 223 aaPredicted RBP7.23□□□□□ -1.25
TPM1-231ENST00000561395 MAOBP27338 520 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 ZFP36L2P47974 494 aaKnown RBP7.23□□□□□ -1.25
TPM1-231ENST00000561395 RAB28P51157 221 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 NEK2P51955 445 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 RAP1GDS1P52306 607 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 CXADRP78310 365 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 STX5Q13190 355 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 RCAN2Q14206 197 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 SLBPQ14493 270 aaKnown RBP eCLIP7.23□□□□□ -1.25
TPM1-231ENST00000561395 RPS6KA2Q15349 733 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 RFTN2Q52LD8 501 aaPredicted RBP7.23□□□□□ -1.25
TPM1-231ENST00000561395 CATSPEREQ5SY80 951 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 C10orf62Q5T681 223 aaPredicted RBP7.23□□□□□ -1.25
TPM1-231ENST00000561395 THEMIS2Q5TEJ8 643 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 IL23RQ5VWK5 629 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 FBXW10Q5XX13 1052 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 REP15Q6BDI9 236 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 CYB5D1Q6P9G0 228 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 BLOC1S3Q6QNY0 202 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 CYP20A1Q6UW02 462 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 NXPE4Q6UWF7 544 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 ABRAXAS1Q6UWZ7 409 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 DHRS13Q6UX07 377 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 C16orf89Q6UX73 402 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 RD3Q7Z3Z2 195 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 C17orf64Q86WR6 236 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 NRROSQ86YC3 692 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 HID1Q8IV36 788 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 LAS2Q8IYD9 372 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 ULK2Q8IYT8 1036 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 DEFB107AQ8IZN7 70 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 DSELQ8IZU8 1212 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 LINC01555Q8NAE3 123 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 KYQ8NBH2 561 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 CADM4Q8NFZ8 388 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 RHBDD1Q8TEB9 315 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 TSPEARQ8WU66 669 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 SMPDL3AQ92484 453 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 SNX19Q92543 992 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 REPS1Q96D71 796 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 MTFMTQ96DP5 389 aaKnown RBP7.23□□□□□ -1.25
TPM1-231ENST00000561395 CMTM7Q96FZ5 175 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 FCRL1Q96LA6 429 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 TEX37Q96LM6 180 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 SLC6A18Q96N87 628 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 FERD3LQ96RJ6 166 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 NPAS2Q99743 824 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 NRTNQ99748 197 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 RAB11FIP5Q9BXF6 653 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 MRPL1Q9BYD6 325 aaKnown RBP7.23□□□□□ -1.25
TPM1-231ENST00000561395 PCBD2Q9H0N5 130 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 TMEM168Q9H0V1 697 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 GAREM1Q9H706 876 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 EFCAB1Q9HAE3 211 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 PELI2Q9HAT8 420 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 BRF2Q9HAW0 419 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 PRDM8Q9NQV8 689 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 GEMIN8Q9NWZ8 242 aaKnown RBP7.23□□□□□ -1.25
TPM1-231ENST00000561395 C1orf109Q9NX04 203 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 NDE1Q9NXR1 346 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 SCHIP1Q9P0W5 487 aaPredicted RBP7.23□□□□□ -1.25
TPM1-231ENST00000561395 TBC1D29Q9UFV1 150 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 EIF3LQ9Y262 564 aaKnown RBP7.23□□□□□ -1.25
TPM1-231ENST00000561395 BTBD3Q9Y2F9 522 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 PCDHGA11Q9Y5H2 935 aa7.23□□□□□ -1.25
TPM1-231ENST00000561395 FLNCQ14315 2725 aa7.22□□□□□ -1.25
TPM1-231ENST00000561395 AHCTF1Q8WYP5 2266 aa7.22□□□□□ -1.25
TPM1-231ENST00000561395 SPTAN1Q13813 2472 aaKnown RBP7.22□□□□□ -1.25
TPM1-231ENST00000561395 A0A088AWK7 358 aa7.22□□□□□ -1.25
TPM1-231ENST00000561395 SPTY2D1-AS1A0A0U1RR47 76 aa7.22□□□□□ -1.25
TPM1-231ENST00000561395 A0A1B0GTW7 788 aa7.22□□□□□ -1.25
TPM1-231ENST00000561395 PIPSLA2A3N6 862 aa7.22□□□□□ -1.25
TPM1-231ENST00000561395 FAM234BA2RU67 622 aa7.22□□□□□ -1.25
TPM1-231ENST00000561395 METTL12A8MUP2 240 aa7.22□□□□□ -1.25
TPM1-231ENST00000561395 C9JVG2 144 aa7.22□□□□□ -1.25
TPM1-231ENST00000561395 MRASO14807 208 aa7.22□□□□□ -1.25
TPM1-231ENST00000561395 ANKRD28O15084 1053 aa7.22□□□□□ -1.25
TPM1-231ENST00000561395 SLC28A2O43868 658 aa7.22□□□□□ -1.25
TPM1-231ENST00000561395 KDM1AO60341 852 aa7.22□□□□□ -1.25
TPM1-231ENST00000561395 NRP2O60462 931 aa7.22□□□□□ -1.25
TPM1-231ENST00000561395 SEC22BO75396 215 aa7.22□□□□□ -1.25
TPM1-231ENST00000561395 EML2O95834 649 aa7.22□□□□□ -1.25
TPM1-231ENST00000561395 TNFP01375 233 aa7.22□□□□□ -1.25
TPM1-231ENST00000561395 G6PDP11413 515 aa7.22□□□□□ -1.25
TPM1-231ENST00000561395 PCNAP12004 261 aa7.22□□□□□ -1.25
TPM1-231ENST00000561395 BCKDHAP12694 445 aa7.22□□□□□ -1.25
TPM1-231ENST00000561395 CAPN3P20807 821 aa7.22□□□□□ -1.25
TPM1-231ENST00000561395 JAK1P23458 1154 aa7.22□□□□□ -1.25
TPM1-231ENST00000561395 CD27P26842 260 aa7.22□□□□□ -1.25
TPM1-231ENST00000561395 NDUFS1P28331 727 aa7.22□□□□□ -1.25
TPM1-231ENST00000561395 IL12AP29459 219 aa7.22□□□□□ -1.25
TPM1-231ENST00000561395 ACTR1BP42025 376 aa7.22□□□□□ -1.25
TPM1-231ENST00000561395 ACTR1AP61163 376 aa7.22□□□□□ -1.25
TPM1-231ENST00000561395 UFM1P61960 85 aa7.22□□□□□ -1.25
TPM1-231ENST00000561395 TBL3Q12788 808 aaKnown RBP7.22□□□□□ -1.25
TPM1-231ENST00000561395 ILF3Q12906 894 aaKnown RBP eCLIP7.22□□□□□ -1.25
TPM1-231ENST00000561395 EIF2B5Q13144 721 aaKnown RBP7.22□□□□□ -1.25
TPM1-231ENST00000561395 ART3Q13508 389 aa7.22□□□□□ -1.25
TPM1-231ENST00000561395 RIPK1Q13546 671 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms