RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 RHOJQ9H4E5 214 aa16.29■□□□□ 0.2
CDC42BPB-208ENST00000561271 GRHL1Q9NZI5 618 aa16.29■□□□□ 0.2
CDC42BPB-208ENST00000561271 WHRNQ9P202 907 aa16.29■□□□□ 0.2
CDC42BPB-208ENST00000561271 MKL2Q9ULH7 1088 aa16.29■□□□□ 0.2
CDC42BPB-208ENST00000561271 NOVA2Q9UNW9 492 aaKnown RBP16.29■□□□□ 0.2
CDC42BPB-208ENST00000561271 PCDHGA10Q9Y5H3 936 aa16.29■□□□□ 0.2
CDC42BPB-208ENST00000561271 IGHV1-45A0A0A0MS14 117 aa16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 A0A1W2PQ72 361 aa16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 ZNF860A6NHJ4 632 aa16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 H0YIG0 161 aa16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 NDUFS4O43181 175 aa16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 KLHL18O94889 574 aa16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 BMP10O95393 424 aa16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 SLC35G6P0C7Q6 338 aa16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 CASQ1P31415 396 aa16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 XCR1P46094 333 aa16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 PCOLCEQ15113 449 aa16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 CATSPEREQ5SY80 951 aa16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 IGFL2Q6UWQ7 119 aa16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 NDUFAF7Q7L592 441 aa16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 PDSS2Q86YH6 399 aa16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 KBTBD2Q8IY47 623 aa16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 ZNF740Q8NDX6 193 aa16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 ABHD11Q8NFV4 315 aa16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 BRIX1Q8TDN6 353 aaKnown RBP16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 PYROXD1Q8WU10 500 aa16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 ANKRD49Q8WVL7 239 aa16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 SLC13A3Q8WWT9 602 aa16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 SLC5A11Q8WWX8 675 aa16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 ATL1Q8WXF7 558 aa16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 NEIL2Q969S2 332 aa16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 MOCOSQ96EN8 888 aa16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 PDLIM5Q96HC4 596 aaKnown RBP16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 MCMBPQ9BTE3 642 aa16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 RBCK1Q9BYM8 510 aa16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 UNKQ9C0B0 810 aaKnown RBP16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 VN1R1Q9GZP7 353 aa16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 EPS8L2Q9H6S3 715 aa16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 ANKHQ9HCJ1 492 aa16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 RIC8BQ9NVN3 520 aa16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 NSMCE4AQ9NXX6 385 aa16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 NTNG1Q9Y2I2 539 aa16.28■□□□□ 0.2
CDC42BPB-208ENST00000561271 DOPEY1Q5JWR5 2465 aa16.27■□□□□ 0.2
CDC42BPB-208ENST00000561271 CXorf49A8MYA2 514 aaPredicted RBP16.27■□□□□ 0.2
CDC42BPB-208ENST00000561271 OR1F1O43749 312 aa16.27■□□□□ 0.2
CDC42BPB-208ENST00000561271 PRR35P0CG20 571 aa16.27■□□□□ 0.2
CDC42BPB-208ENST00000561271 MFAP5Q13361 173 aa16.27■□□□□ 0.2
CDC42BPB-208ENST00000561271 NR6A1Q15406 480 aa16.27■□□□□ 0.2
CDC42BPB-208ENST00000561271 TSNQ15631 228 aaKnown RBP16.27■□□□□ 0.2
CDC42BPB-208ENST00000561271 MINDY4Q4G0A6 757 aa16.27■□□□□ 0.2
CDC42BPB-208ENST00000561271 ISLR2Q6UXK2 745 aa16.27■□□□□ 0.2
CDC42BPB-208ENST00000561271 SYT10Q6XYQ8 523 aa16.27■□□□□ 0.2
CDC42BPB-208ENST00000561271 LANCL3Q6ZV70 420 aa16.27■□□□□ 0.2
CDC42BPB-208ENST00000561271 MAATS1Q7Z4T9 603 aa16.27■□□□□ 0.2
CDC42BPB-208ENST00000561271 TMPRSS11BQ86T26 416 aa16.27■□□□□ 0.2
CDC42BPB-208ENST00000561271 NKAPQ8N5F7 415 aaKnown RBP16.27■□□□□ 0.2
CDC42BPB-208ENST00000561271 SIRT6Q8N6T7 355 aa16.27■□□□□ 0.2
CDC42BPB-208ENST00000561271 OR51Q1Q8NH59 317 aa16.27■□□□□ 0.2
CDC42BPB-208ENST00000561271 EGFL8Q99944 293 aa16.27■□□□□ 0.2
CDC42BPB-208ENST00000561271 CAB39LQ9H9S4 337 aa16.27■□□□□ 0.2
CDC42BPB-208ENST00000561271 PTGFRNQ9P2B2 879 aa16.27■□□□□ 0.2
CDC42BPB-208ENST00000561271 EML6Q6ZMW3 1958 aa16.27■□□□□ 0.19
CDC42BPB-208ENST00000561271 MYO7BQ6PIF6 2116 aa16.27■□□□□ 0.19
CDC42BPB-208ENST00000561271 CROCCQ5TZA2 2017 aa16.26■□□□□ 0.19
CDC42BPB-208ENST00000561271 LOC102723996A0A087X1L8 192 aa16.26■□□□□ 0.19
CDC42BPB-208ENST00000561271 IGHV3-20A0A0C4DH32 117 aa16.26■□□□□ 0.19
CDC42BPB-208ENST00000561271 TCRBV9S1A1TA0A576 114 aa16.26■□□□□ 0.19
CDC42BPB-208ENST00000561271 TRBC2A0A5B9 178 aa16.26■□□□□ 0.19
CDC42BPB-208ENST00000561271 BLACEA4D250 179 aa16.26■□□□□ 0.19
CDC42BPB-208ENST00000561271 OR2W5A6NFC9 320 aa16.26■□□□□ 0.19
CDC42BPB-208ENST00000561271 AGFG2O95081 481 aa16.26■□□□□ 0.19
CDC42BPB-208ENST00000561271 SERPIND1P05546 499 aa16.26■□□□□ 0.19
CDC42BPB-208ENST00000561271 UQCRHP07919 91 aa16.26■□□□□ 0.19
CDC42BPB-208ENST00000561271 C8orf89P0DMQ9 161 aa16.26■□□□□ 0.19
CDC42BPB-208ENST00000561271 VARSP26640 1264 aaKnown RBP16.26■□□□□ 0.19
CDC42BPB-208ENST00000561271 GLRBP48167 497 aa16.26■□□□□ 0.19
CDC42BPB-208ENST00000561271 ETF1P62495 437 aaKnown RBP16.26■□□□□ 0.19
CDC42BPB-208ENST00000561271 REEP5Q00765 189 aa16.26■□□□□ 0.19
CDC42BPB-208ENST00000561271 CBLBQ13191 982 aa16.26■□□□□ 0.19
CDC42BPB-208ENST00000561271 CRB2Q5IJ48 1285 aa16.26■□□□□ 0.19
CDC42BPB-208ENST00000561271 FHL5Q5TD97 284 aa16.26■□□□□ 0.19
CDC42BPB-208ENST00000561271 TMEM205Q6UW68 189 aa16.26■□□□□ 0.19
CDC42BPB-208ENST00000561271 FRA10AC1Q70Z53 315 aa16.26■□□□□ 0.19
CDC42BPB-208ENST00000561271 ADAMTSL2Q86TH1 951 aa16.26■□□□□ 0.19
CDC42BPB-208ENST00000561271 THOC6Q86W42 341 aaKnown RBP16.26■□□□□ 0.19
CDC42BPB-208ENST00000561271 OR4K1Q8NGD4 311 aa16.26■□□□□ 0.19
CDC42BPB-208ENST00000561271 PSMF1Q92530 271 aa16.26■□□□□ 0.19
CDC42BPB-208ENST00000561271 GPAMQ9HCL2 828 aa16.26■□□□□ 0.19
CDC42BPB-208ENST00000561271 NAALAD2Q9Y3Q0 740 aa16.26■□□□□ 0.19
CDC42BPB-208ENST00000561271 DYRK1BQ9Y463 629 aa16.26■□□□□ 0.19
CDC42BPB-208ENST00000561271 GTF3C1Q12789 2109 aa16.25■□□□□ 0.19
CDC42BPB-208ENST00000561271 CTAGE15A4D2H0 777 aa16.25■□□□□ 0.19
CDC42BPB-208ENST00000561271 EIF3HO15372 352 aaKnown RBP eCLIP16.25■□□□□ 0.19
CDC42BPB-208ENST00000561271 PHGDHO43175 533 aaKnown RBP16.25■□□□□ 0.19
CDC42BPB-208ENST00000561271 SEC24DO94855 1032 aaPredicted RBP16.25■□□□□ 0.19
CDC42BPB-208ENST00000561271 B3GALT4O96024 378 aa16.25■□□□□ 0.19
CDC42BPB-208ENST00000561271 SERPINA7P05543 415 aa16.25■□□□□ 0.19
CDC42BPB-208ENST00000561271 SOX11P35716 441 aa16.25■□□□□ 0.19
CDC42BPB-208ENST00000561271 SLC12A2P55011 1212 aa16.25■□□□□ 0.19
CDC42BPB-208ENST00000561271 CSHL1Q14406 222 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms