RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 RNASE12Q5GAN4 147 aaKnown RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 ENTPD8Q5MY95 495 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 WLSQ5T9L3 541 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 NKAIN2Q5VXU1 208 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 TTC23Q5W5X9 447 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 METRNLQ641Q3 311 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 NAIF1Q69YI7 327 aaPredicted RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 PDPK2PQ6A1A2 396 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 HIST2H2BCQ6DN03 193 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 HIST2H2BDQ6DRA6 164 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 RTL6Q6ICC9 239 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 PLEKHA7Q6IQ23 1121 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 CEP85Q6P2H3 762 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 VWA1Q6PCB0 445 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 PRSS55Q6UWB4 352 aaPredicted RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 KDM7AQ6ZMT4 941 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 RBM44Q6ZP01 1051 aaKnown RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 Q6ZPB1 254 aaPredicted RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 RNF207Q6ZRF8 634 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 KCTD8Q6ZWB6 473 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 CCDC80Q76M96 950 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 SHFQ7M4L6 423 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 ATG9AQ7Z3C6 839 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 IRF2BP2Q7Z5L9 587 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 VTCN1Q7Z7D3 282 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 PATL1Q86TB9 770 aaKnown RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 ATG4DQ86TL0 474 aaPredicted RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 SPATA24Q86W54 205 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 FOXRED2Q8IWF2 684 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 LGI2Q8N0V4 545 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 C1orf52Q8N6N3 182 aaKnown RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 THAP8Q8NA92 274 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 MLKLQ8NB16 471 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 SIDT2Q8NBJ9 832 aaKnown RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 RNF149Q8NC42 400 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 OR4K1Q8NGD4 311 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 OR5M8Q8NGP6 311 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 OR2T3Q8NH03 318 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 LRRC20Q8TCA0 184 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 PROKR1Q8TCW9 393 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 DQX1Q8TE96 717 aaKnown RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 CHPT1Q8WUD6 406 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 UBTD2Q8WUN7 234 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 SLC35F5Q8WV83 523 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 C17orf50Q8WW18 174 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 NEU4Q8WWR8 484 aaPredicted RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 PIBF1Q8WXW3 757 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 SEPT8Q92599 483 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 SEMA4DQ92854 862 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 ERGIC1Q969X5 290 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 AZIN2Q96A70 460 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 ISG20Q96AZ6 181 aaKnown RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 TMEM18Q96B42 140 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 NACC2Q96BF6 587 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 COQ8BQ96D53 544 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 LGALS12Q96DT0 336 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 NAF1Q96HR8 494 aaKnown RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 PIWIL1Q96J94 861 aaKnown RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 CXorf58Q96LI9 332 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 ANKRD27Q96NW4 1050 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 FCRL5Q96RD9 977 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 RASL10BQ96S79 203 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 NPAS2Q99743 824 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 URM1Q9BTM9 101 aaKnown RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 TMEM43Q9BTV4 400 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 TEX101Q9BY14 249 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 FRMD8Q9BZ67 464 aaPredicted RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 TM6SF1Q9BZW5 370 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 MCOLN1Q9GZU1 580 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 POLR3FQ9H1D9 316 aaPredicted RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 GANQ9H2C0 597 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 SEMA6AQ9H2E6 1030 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 BLZF1Q9H2G9 400 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 RIMS4Q9H426 269 aaPredicted RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 AAMDCQ9H7C9 122 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 C10orf88Q9H8K7 445 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 APMAPQ9HDC9 416 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 CNGB3Q9NQW8 809 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 SLC2A4RGQ9NR83 387 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 PNO1Q9NRX1 252 aaKnown RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 AGPAT3Q9NRZ7 376 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 PCMTD2Q9NV79 361 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 MIOSQ9NXC5 875 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 GCNT4Q9P109 453 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 RCC2Q9P258 522 aaKnown RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 PTGFRNQ9P2B2 879 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 MRTO4Q9UKD2 239 aaKnown RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 UTS2RQ9UKP6 389 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 CDH9Q9ULB4 789 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 ZNF490Q9ULM2 529 aaPredicted RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 FZD10Q9ULW2 581 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 RPH3ALQ9UNE2 315 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 ZFR2Q9UPR6 939 aaKnown RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 LAMP3Q9UQV4 416 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 SLC9A8Q9Y2E8 581 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 NSG2Q9Y328 171 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 NFE2L3Q9Y4A8 694 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 SRPRBQ9Y5M8 271 aaKnown RBP1.94□□□□□ -2.1
RTF1-207ENST00000561076 GMEB1Q9Y692 573 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 BZW2Q9Y6E2 419 aaKnown RBP1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms