RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 PHF10Q8WUB8 498 aaKnown RBP8.85□□□□□ -0.99
SMAD3-215ENST00000560424 NRGNQ92686 78 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 MIEF2Q96C03 454 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 ZNF778Q96MU6 729 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 GPR137Q96N19 417 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 CHRNA10Q9GZZ6 450 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 SLC22A11Q9NSA0 550 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 CUTCQ9NTM9 273 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 STMN3Q9NZ72 180 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 IL1RAPL1Q9NZN1 696 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 CTNNAL1Q9UBT7 734 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 CTSFQ9UBX1 484 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 ADAM21Q9UKJ8 722 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 SPO11Q9Y5K1 396 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 HMX2A2RU54 273 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 SMIM23A6NLE4 172 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 CFAP99D6REC4 459 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 NPIPA5E9PKD4 350 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 E9PLN8 166 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 DSCR3O14972 297 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 HCRTR1O43613 425 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 TYROBPO43914 113 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 SHOX2O60902 331 aaPredicted RBP8.84□□□□□ -0.99
SMAD3-215ENST00000560424 SERPINA7P05543 415 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 CTSBP07858 339 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 KRT15P19012 456 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 DNASE1P24855 282 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 SPRP35270 261 aaPredicted RBP8.84□□□□□ -0.99
SMAD3-215ENST00000560424 SOX11P35716 441 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 CCNFP41002 786 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 MAGEA12P43365 314 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 PRRC2AP48634 2157 aaKnown RBP8.84□□□□□ -0.99
SMAD3-215ENST00000560424 MEOX1P50221 254 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 CBX1P83916 185 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 GABPB1Q06547 395 aaPredicted RBP8.84□□□□□ -0.99
SMAD3-215ENST00000560424 ZNF33BQ06732 778 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 GRM7Q14831 915 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 TMED2Q15363 201 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 ZIC1Q15915 447 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 ZNF766Q5HY98 468 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 Q6ZPB1 254 aaPredicted RBP8.84□□□□□ -0.99
SMAD3-215ENST00000560424 Q71RC1 249 aaPredicted RBP8.84□□□□□ -0.99
SMAD3-215ENST00000560424 LCA5Q86VQ0 697 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 CTAGE3PQ8IX95 158 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 SLC25A41Q8N5S1 370 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 LILRA3Q8N6C8 439 aaPredicted RBP8.84□□□□□ -0.99
SMAD3-215ENST00000560424 METTL27Q8N6F8 245 aaPredicted RBP8.84□□□□□ -0.99
SMAD3-215ENST00000560424 FAM98AQ8NCA5 519 aaKnown RBP8.84□□□□□ -0.99
SMAD3-215ENST00000560424 C2CD4AQ8NCU7 369 aaPredicted RBP8.84□□□□□ -0.99
SMAD3-215ENST00000560424 ZNF398Q8TD17 642 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 BLOC1S5Q8TDH9 187 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 TFGQ92734 400 aaPredicted RBP8.84□□□□□ -0.99
SMAD3-215ENST00000560424 C8orf44Q96CB5 159 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 LINC00615Q96LM1 132 aaPredicted RBP8.84□□□□□ -0.99
SMAD3-215ENST00000560424 OR2A14Q96R47 310 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 SMC6Q96SB8 1091 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 RBBP8Q99708 897 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 VKORC1Q9BQB6 163 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 RNF32Q9H0A6 362 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 TSPAN10Q9H1Z9 355 aaPredicted RBP8.84□□□□□ -0.99
SMAD3-215ENST00000560424 CENPHQ9H3R5 247 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 CCDC134Q9H6E4 229 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 C20orf96Q9NUD7 363 aaPredicted RBP8.84□□□□□ -0.99
SMAD3-215ENST00000560424 RIC8BQ9NVN3 520 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 NLE1Q9NVX2 485 aaPredicted RBP8.84□□□□□ -0.99
SMAD3-215ENST00000560424 SMOXQ9NWM0 555 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.84□□□□□ -0.99
SMAD3-215ENST00000560424 TXNDC16Q9P2K2 825 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 ZNF282Q9UDV7 671 aaPredicted RBP8.84□□□□□ -0.99
SMAD3-215ENST00000560424 KCNN3Q9UGI6 736 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 CRLS1Q9UJA2 301 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 C3orf18Q9UK00 162 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 CORO1CQ9ULV4 474 aaPredicted RBP8.84□□□□□ -0.99
SMAD3-215ENST00000560424 NPIPA1Q9UND3 350 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 ZNF835Q9Y2P0 537 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 MAU2Q9Y6X3 613 aa8.84□□□□□ -0.99
SMAD3-215ENST00000560424 ABCA4P78363 2273 aa8.83□□□□□ -1
SMAD3-215ENST00000560424 C2orf81A6NN90 581 aa8.83□□□□□ -1
SMAD3-215ENST00000560424 FAM90A27PA6NNH2 459 aa8.83□□□□□ -1
SMAD3-215ENST00000560424 STX7O15400 261 aaKnown RBP8.83□□□□□ -1
SMAD3-215ENST00000560424 BUD23O43709 281 aaKnown RBP8.83□□□□□ -1
SMAD3-215ENST00000560424 SLCO2B1O94956 709 aa8.83□□□□□ -1
SMAD3-215ENST00000560424 VAPBO95292 243 aa8.83□□□□□ -1
SMAD3-215ENST00000560424 CHRM5P08912 532 aaPredicted RBP8.83□□□□□ -1
SMAD3-215ENST00000560424 ERVK-10P10266 1014 aa8.83□□□□□ -1
SMAD3-215ENST00000560424 OGNP20774 298 aaKnown RBP8.83□□□□□ -1
SMAD3-215ENST00000560424 EEF1DP29692 281 aaKnown RBP8.83□□□□□ -1
SMAD3-215ENST00000560424 OR1D4P47884 311 aa8.83□□□□□ -1
SMAD3-215ENST00000560424 GABRA4P48169 554 aa8.83□□□□□ -1
SMAD3-215ENST00000560424 CD151P48509 253 aa8.83□□□□□ -1
SMAD3-215ENST00000560424 DGKQP52824 942 aa8.83□□□□□ -1
SMAD3-215ENST00000560424 EEF1A2Q05639 463 aaKnown RBP8.83□□□□□ -1
SMAD3-215ENST00000560424 KLC1Q07866 573 aa8.83□□□□□ -1
SMAD3-215ENST00000560424 FAM214AQ32MH5 1076 aa8.83□□□□□ -1
SMAD3-215ENST00000560424 HSP90AA5PQ58FG0 334 aa8.83□□□□□ -1
SMAD3-215ENST00000560424 ZC3H12BQ5HYM0 836 aaKnown RBP8.83□□□□□ -1
SMAD3-215ENST00000560424 TCTE1Q5JU00 501 aa8.83□□□□□ -1
SMAD3-215ENST00000560424 YOD1Q5VVQ6 348 aaPredicted RBP8.83□□□□□ -1
SMAD3-215ENST00000560424 NEPROQ6NW34 567 aa8.83□□□□□ -1
SMAD3-215ENST00000560424 CES3Q6UWW8 571 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms