RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 CAPS2Q9BXY5 557 aa12.53□□□□□ -0.4
SMAD3-213ENST00000560175 PITHD1Q9GZP4 211 aaPredicted RBP12.53□□□□□ -0.4
SMAD3-213ENST00000560175 CDC42EP4Q9H3Q1 356 aaKnown RBP12.53□□□□□ -0.4
SMAD3-213ENST00000560175 EHD1Q9H4M9 534 aa12.53□□□□□ -0.4
SMAD3-213ENST00000560175 SOX17Q9H6I2 414 aaPredicted RBP12.53□□□□□ -0.4
SMAD3-213ENST00000560175 ZNF552Q9H707 407 aaPredicted RBP12.53□□□□□ -0.4
SMAD3-213ENST00000560175 NT5DC2Q9H857 520 aa12.53□□□□□ -0.4
SMAD3-213ENST00000560175 ATP13A2Q9NQ11 1180 aa12.53□□□□□ -0.4
SMAD3-213ENST00000560175 IGSF5Q9NSI5 407 aa12.53□□□□□ -0.4
SMAD3-213ENST00000560175 C14orf105Q9NVL8 296 aa12.53□□□□□ -0.4
SMAD3-213ENST00000560175 GPRC5BQ9NZH0 403 aa12.53□□□□□ -0.4
SMAD3-213ENST00000560175 ZFP69BQ9UJL9 534 aa12.53□□□□□ -0.4
SMAD3-213ENST00000560175 ZNF451Q9Y4E5 1061 aa12.53□□□□□ -0.4
SMAD3-213ENST00000560175 HEMK1Q9Y5R4 338 aaPredicted RBP12.53□□□□□ -0.4
SMAD3-213ENST00000560175 NBASA2RRP1 2371 aa12.52□□□□□ -0.4
SMAD3-213ENST00000560175 SCN2AQ99250 2005 aa12.52□□□□□ -0.4
SMAD3-213ENST00000560175 UBR5O95071 2799 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-213ENST00000560175 LOC102723996A0A087X1L8 192 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 OR1F1O43749 312 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 KLHL41O60662 606 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 PRAMEF4O60810 478 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 IPO13O94829 963 aaKnown RBP12.52□□□□□ -0.41
SMAD3-213ENST00000560175 C1GALT1C1LP0DN25 315 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 MTHFD2P13995 350 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 GNAZP19086 355 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 GDF5P43026 501 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 MAGEA12P43365 314 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 AVPR1BP47901 424 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 PGDP52209 483 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 EFNA3P52797 238 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 HYAL2Q12891 473 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 AIMP2Q13155 320 aaKnown RBP12.52□□□□□ -0.41
SMAD3-213ENST00000560175 C18orf21Q32NC0 220 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-213ENST00000560175 PRAMEF9Q5VWM5 478 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 IGFL2Q6UWQ7 119 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 PRSS41Q7RTY9 318 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 CMC1Q7Z7K0 106 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 PDSS2Q86YH6 399 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 ZC3H7AQ8IWR0 971 aaKnown RBP12.52□□□□□ -0.41
SMAD3-213ENST00000560175 CENPLQ8N0S6 344 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-213ENST00000560175 GALNT16Q8N428 558 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 ANKRD53Q8N9V6 530 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 CLEC1AQ8NC01 280 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 OR9A4Q8NGU2 314 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 RHEBL1Q8TAI7 183 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 STAG3L4Q8TBR4 150 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 CREB3L4Q8TEY5 395 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 SLC44A1Q8WWI5 657 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 MOCOSQ96EN8 888 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 SEC16BQ96JE7 1060 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 GPR78Q96P69 363 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 MACROD1Q9BQ69 325 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 TMEM79Q9BSE2 394 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 CRB3Q9BUF7 120 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 SLC6A16Q9GZN6 736 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 CLK4Q9HAZ1 481 aaKnown RBP12.52□□□□□ -0.41
SMAD3-213ENST00000560175 NMRAL1Q9HBL8 299 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 GPR83Q9NYM4 423 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 TRPC4Q9UBN4 977 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 C3orf18Q9UK00 162 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 RELNP78509 3460 aa12.52□□□□□ -0.41
SMAD3-213ENST00000560175 IDSB3KWA1 339 aa12.51□□□□□ -0.41
SMAD3-213ENST00000560175 C2P06681 752 aa12.51□□□□□ -0.41
SMAD3-213ENST00000560175 LTA4HP09960 611 aaKnown RBP12.51□□□□□ -0.41
SMAD3-213ENST00000560175 SLC35G6P0C7Q6 338 aa12.51□□□□□ -0.41
SMAD3-213ENST00000560175 IL10P22301 178 aa12.51□□□□□ -0.41
SMAD3-213ENST00000560175 GMPRP36959 345 aa12.51□□□□□ -0.41
SMAD3-213ENST00000560175 CASP2P42575 452 aa12.51□□□□□ -0.41
SMAD3-213ENST00000560175 EMP2P54851 167 aa12.51□□□□□ -0.41
SMAD3-213ENST00000560175 MEF2AQ02078 507 aaPredicted RBP12.51□□□□□ -0.41
SMAD3-213ENST00000560175 Q0VFX4 171 aa12.51□□□□□ -0.41
SMAD3-213ENST00000560175 HERC3Q15034 1050 aa12.51□□□□□ -0.41
SMAD3-213ENST00000560175 SYT16Q17RD7 645 aa12.51□□□□□ -0.41
SMAD3-213ENST00000560175 SHISA6Q6ZSJ9 500 aa12.51□□□□□ -0.41
SMAD3-213ENST00000560175 FRA10AC1Q70Z53 315 aa12.51□□□□□ -0.41
SMAD3-213ENST00000560175 TBC1D19Q8N5T2 526 aa12.51□□□□□ -0.41
SMAD3-213ENST00000560175 TRPV3Q8NET8 790 aa12.51□□□□□ -0.41
SMAD3-213ENST00000560175 IFT81Q8WYA0 676 aa12.51□□□□□ -0.41
SMAD3-213ENST00000560175 TRIM44Q96DX7 344 aaPredicted RBP12.51□□□□□ -0.41
SMAD3-213ENST00000560175 VPS50Q96JG6 964 aa12.51□□□□□ -0.41
SMAD3-213ENST00000560175 TSNARE1Q96NA8 513 aa12.51□□□□□ -0.41
SMAD3-213ENST00000560175 EGFL8Q99944 293 aa12.51□□□□□ -0.41
SMAD3-213ENST00000560175 AIF1LQ9BQI0 150 aa12.51□□□□□ -0.41
SMAD3-213ENST00000560175 MESP1Q9BRJ9 268 aa12.51□□□□□ -0.41
SMAD3-213ENST00000560175 UNKQ9C0B0 810 aaKnown RBP12.51□□□□□ -0.41
SMAD3-213ENST00000560175 EPN3Q9H201 632 aa12.51□□□□□ -0.41
SMAD3-213ENST00000560175 CNOT10Q9H9A5 744 aaKnown RBP12.51□□□□□ -0.41
SMAD3-213ENST00000560175 FBXL4Q9UKA2 621 aa12.51□□□□□ -0.41
SMAD3-213ENST00000560175 ACOT9Q9Y305 439 aa12.51□□□□□ -0.41
SMAD3-213ENST00000560175 DYRK1BQ9Y463 629 aa12.51□□□□□ -0.41
SMAD3-213ENST00000560175 PRRC2CQ9Y520 2896 aaKnown RBP12.5□□□□□ -0.41
SMAD3-213ENST00000560175 A0A087X1B8 175 aa12.5□□□□□ -0.41
SMAD3-213ENST00000560175 MASP2O00187 686 aa12.5□□□□□ -0.41
SMAD3-213ENST00000560175 MAP2K7O14733 419 aa12.5□□□□□ -0.41
SMAD3-213ENST00000560175 KLK8O60259 260 aa12.5□□□□□ -0.41
SMAD3-213ENST00000560175 GALR3O60755 368 aaPredicted RBP12.5□□□□□ -0.41
SMAD3-213ENST00000560175 KERAO60938 352 aa12.5□□□□□ -0.41
SMAD3-213ENST00000560175 STK16O75716 305 aa12.5□□□□□ -0.41
SMAD3-213ENST00000560175 WFS1O76024 890 aa12.5□□□□□ -0.41
SMAD3-213ENST00000560175 WDR47O94967 919 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms