RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 UGT3A1Q6NUS8 523 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 IRGCQ6NXR0 463 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 ZCCHC12Q6PEW1 402 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 PSRC1Q6PGN9 363 aaPredicted RBP2.12□□□□□ -2.07
GABPB1-209ENST00000559100 SYCE2Q6PIF2 218 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 UNQ6126/PRO20091Q6UXV3 157 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 GPR141Q7Z602 305 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 ADAMTSL2Q86TH1 951 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 PRUNE1Q86TP1 453 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 PLD3Q8IV08 490 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 ELMOD2Q8IZ81 293 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 ZNF444Q8N0Y2 327 aaPredicted RBP2.12□□□□□ -2.07
GABPB1-209ENST00000559100 ZNF383Q8NA42 475 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 OR2T12Q8NG77 320 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 SPATA18Q8TC71 538 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 GRHL3Q8TE85 626 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 SEPT8Q92599 483 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 HAS2Q92819 552 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 NEUROG1Q92886 237 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 BICD1Q96G01 975 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 RBM41Q96IZ5 413 aaKnown RBP2.12□□□□□ -2.07
GABPB1-209ENST00000559100 VPS39Q96JC1 886 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 SAMD8Q96LT4 415 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 ZNF354BQ96LW1 612 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 NDNQ99608 321 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 MAP3K3Q99759 626 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 LRRC1Q9BTT6 524 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 LRRC2Q9BYS8 371 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 ACPTQ9BZG2 426 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 MTMR12Q9C0I1 747 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 LAT2Q9GZY6 243 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 CARD9Q9H257 536 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 BICC1Q9H694 974 aaKnown RBP2.12□□□□□ -2.07
GABPB1-209ENST00000559100 SDR39U1Q9NRG7 319 aaPredicted RBP2.12□□□□□ -2.07
GABPB1-209ENST00000559100 FGF21Q9NSA1 209 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 PANK4Q9NVE7 773 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 AATFQ9NY61 560 aaKnown RBP eCLIP2.12□□□□□ -2.07
GABPB1-209ENST00000559100 COPS7AQ9UBW8 275 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 CLIP2Q9UDT6 1046 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 FAM153AQ9UHL3 310 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 FOXA2Q9Y261 457 aaPredicted RBP2.12□□□□□ -2.07
GABPB1-209ENST00000559100 KIF3AQ9Y496 699 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 CGNL1Q0VF96 1302 aa2.12□□□□□ -2.07
GABPB1-209ENST00000559100 A0A1W2PN81 502 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 PLSCR5A0PG75 271 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 PROB1E7EW31 1015 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 SLC28A1O00337 649 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 EEF2KO00418 725 aaKnown RBP2.11□□□□□ -2.07
GABPB1-209ENST00000559100 XPNPEP2O43895 674 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 SOCS5O75159 536 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 PEX11AO75192 247 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 CLN5O75503 358 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 OR6A2O95222 327 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 IGHV4-39P01824 125 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 PGK2P07205 417 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 PROS1P07225 676 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 NUDT17P0C025 328 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 TSPY4P0CV99 314 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 TSPY10P0CW01 314 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 PRKAR1AP10644 381 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 CETPP11597 493 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 CA4P22748 312 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 SRD5A2P31213 254 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 CHRNA7P36544 502 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 SLC1A3P43003 542 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 OR3A3P47888 321 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 GLIPR1P48060 266 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 SLC6A12P48065 614 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 PDLIM4P50479 330 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 DNA2P51530 1060 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 GEMP55040 296 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 MAZP56270 477 aaKnown RBP2.11□□□□□ -2.07
GABPB1-209ENST00000559100 CLDN15P56746 228 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 CLDN17P56750 224 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 INHBEP58166 350 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 RPP38P78345 283 aaKnown RBP2.11□□□□□ -2.07
GABPB1-209ENST00000559100 KCNJ10P78508 379 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 SSBP2P81877 361 aaPredicted RBP2.11□□□□□ -2.07
GABPB1-209ENST00000559100 MRPS21P82921 87 aaKnown RBP2.11□□□□□ -2.07
GABPB1-209ENST00000559100 GIT2Q14161 759 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 BTG3Q14201 252 aaPredicted RBP2.11□□□□□ -2.07
GABPB1-209ENST00000559100 TAF7Q15545 349 aaPredicted RBP2.11□□□□□ -2.07
GABPB1-209ENST00000559100 C20orf194Q5TEA3 1177 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 KLHL10Q6JEL2 608 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 NEK5Q6P3R8 708 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 AFTPHQ6ULP2 937 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 UNC5DQ6UXZ4 953 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 ZNF852Q6ZMS4 543 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 C17orf107Q6ZR85 190 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 SLC24A5Q71RS6 500 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 MARK2Q7KZI7 788 aaKnown RBP2.11□□□□□ -2.07
GABPB1-209ENST00000559100 MCM10Q7L590 875 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 ISCA2Q86U28 154 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 STHQ8IWL8 128 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 LAX1Q8IWV1 398 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 TDHQ8IZJ6 230 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 FBXW8Q8N3Y1 598 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 PRSS35Q8N3Z0 413 aa2.11□□□□□ -2.07
GABPB1-209ENST00000559100 METTL27Q8N6F8 245 aaPredicted RBP2.11□□□□□ -2.07
GABPB1-209ENST00000559100 IQCF1Q8N6M8 205 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms