RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 ISLR2Q6UXK2 745 aa16.1■□□□□ 0.17
LRRC28-210ENST00000558879 PDSS2Q86YH6 399 aa16.1■□□□□ 0.17
LRRC28-210ENST00000558879 NKAPQ8N5F7 415 aaKnown RBP16.1■□□□□ 0.17
LRRC28-210ENST00000558879 NEIL2Q969S2 332 aa16.1■□□□□ 0.17
LRRC28-210ENST00000558879 ALKBH8Q96BT7 664 aaKnown RBP16.1■□□□□ 0.17
LRRC28-210ENST00000558879 VPS39Q96JC1 886 aa16.1■□□□□ 0.17
LRRC28-210ENST00000558879 MACROD1Q9BQ69 325 aa16.1■□□□□ 0.17
LRRC28-210ENST00000558879 ERP44Q9BS26 406 aa16.1■□□□□ 0.17
LRRC28-210ENST00000558879 YIPF2Q9BWQ6 316 aa16.1■□□□□ 0.17
LRRC28-210ENST00000558879 VN1R1Q9GZP7 353 aa16.1■□□□□ 0.17
LRRC28-210ENST00000558879 ZNF700Q9H0M5 742 aa16.1■□□□□ 0.17
LRRC28-210ENST00000558879 POPDC3Q9HBV1 291 aa16.1■□□□□ 0.17
LRRC28-210ENST00000558879 MKL2Q9ULH7 1088 aa16.1■□□□□ 0.17
LRRC28-210ENST00000558879 SLC22A7Q9Y694 548 aa16.1■□□□□ 0.17
LRRC28-210ENST00000558879 TRBC2A0A5B9 178 aa16.09■□□□□ 0.17
LRRC28-210ENST00000558879 PABPN1LA6NDY0 278 aaKnown RBP16.09■□□□□ 0.17
LRRC28-210ENST00000558879 NPEPPSL1A6NEC2 478 aa16.09■□□□□ 0.17
LRRC28-210ENST00000558879 CDC7O00311 574 aa16.09■□□□□ 0.17
LRRC28-210ENST00000558879 JRKO75564 520 aa16.09■□□□□ 0.17
LRRC28-210ENST00000558879 GUCA1CO95843 209 aa16.09■□□□□ 0.17
LRRC28-210ENST00000558879 C1QAP02745 245 aa16.09■□□□□ 0.17
LRRC28-210ENST00000558879 SERPINA7P05543 415 aa16.09■□□□□ 0.17
LRRC28-210ENST00000558879 CXCR2P25025 360 aa16.09■□□□□ 0.17
LRRC28-210ENST00000558879 CCR8P51685 355 aa16.09■□□□□ 0.17
LRRC28-210ENST00000558879 MRPS25P82663 173 aaKnown RBP16.09■□□□□ 0.17
LRRC28-210ENST00000558879 REEP5Q00765 189 aa16.09■□□□□ 0.17
LRRC28-210ENST00000558879 MEF2AQ02078 507 aaPredicted RBP16.09■□□□□ 0.17
LRRC28-210ENST00000558879 C2orf54Q08AI8 447 aa16.09■□□□□ 0.17
LRRC28-210ENST00000558879 ILF2Q12905 390 aaKnown RBP16.09■□□□□ 0.17
LRRC28-210ENST00000558879 B3GNTL1Q67FW5 361 aaPredicted RBP16.09■□□□□ 0.17
LRRC28-210ENST00000558879 FAAH2Q6GMR7 532 aa16.09■□□□□ 0.17
LRRC28-210ENST00000558879 RIPOR1Q6ZS17 1223 aa16.09■□□□□ 0.17
LRRC28-210ENST00000558879 CEP97Q8IW35 865 aa16.09■□□□□ 0.17
LRRC28-210ENST00000558879 KBTBD2Q8IY47 623 aa16.09■□□□□ 0.17
LRRC28-210ENST00000558879 AFAP1L2Q8N4X5 818 aa16.09■□□□□ 0.17
LRRC28-210ENST00000558879 CISD2Q8N5K1 135 aaKnown RBP16.09■□□□□ 0.17
LRRC28-210ENST00000558879 ZCCHC10Q8TBK6 192 aa16.09■□□□□ 0.17
LRRC28-210ENST00000558879 ANKRD49Q8WVL7 239 aa16.09■□□□□ 0.17
LRRC28-210ENST00000558879 SLC13A3Q8WWT9 602 aa16.09■□□□□ 0.17
LRRC28-210ENST00000558879 SLC5A11Q8WWX8 675 aa16.09■□□□□ 0.17
LRRC28-210ENST00000558879 PSMG3-AS1Q96PY0 264 aa16.09■□□□□ 0.17
LRRC28-210ENST00000558879 PHACTR1Q9C0D0 580 aa16.09■□□□□ 0.17
LRRC28-210ENST00000558879 DPH5Q9H2P9 285 aa16.09■□□□□ 0.17
LRRC28-210ENST00000558879 OARD1Q9Y530 152 aa16.09■□□□□ 0.17
LRRC28-210ENST00000558879 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.09■□□□□ 0.17
LRRC28-210ENST00000558879 NBPF19A0A087WUL8 3843 aa16.08■□□□□ 0.17
LRRC28-210ENST00000558879 CELA2AP08217 269 aa16.08■□□□□ 0.16
LRRC28-210ENST00000558879 C8orf89P0DMQ9 161 aa16.08■□□□□ 0.16
LRRC28-210ENST00000558879 SSTR1P30872 391 aa16.08■□□□□ 0.16
LRRC28-210ENST00000558879 XCR1P46094 333 aa16.08■□□□□ 0.16
LRRC28-210ENST00000558879 CALCOCO2Q13137 446 aa16.08■□□□□ 0.16
LRRC28-210ENST00000558879 ZNF169Q14929 603 aaPredicted RBP16.08■□□□□ 0.16
LRRC28-210ENST00000558879 CATSPEREQ5SY80 951 aa16.08■□□□□ 0.16
LRRC28-210ENST00000558879 FHL5Q5TD97 284 aa16.08■□□□□ 0.16
LRRC28-210ENST00000558879 KLHDC8AQ8IYD2 350 aa16.08■□□□□ 0.16
LRRC28-210ENST00000558879 ZNF740Q8NDX6 193 aa16.08■□□□□ 0.16
LRRC28-210ENST00000558879 OR51Q1Q8NH59 317 aa16.08■□□□□ 0.16
LRRC28-210ENST00000558879 BRIX1Q8TDN6 353 aaKnown RBP16.08■□□□□ 0.16
LRRC28-210ENST00000558879 IMMP1LQ96LU5 166 aa16.08■□□□□ 0.16
LRRC28-210ENST00000558879 LMF1Q96S06 567 aa16.08■□□□□ 0.16
LRRC28-210ENST00000558879 PELI2Q9HAT8 420 aa16.08■□□□□ 0.16
LRRC28-210ENST00000558879 ANKHQ9HCJ1 492 aa16.08■□□□□ 0.16
LRRC28-210ENST00000558879 HCN3Q9P1Z3 774 aa16.08■□□□□ 0.16
LRRC28-210ENST00000558879 DIDO1Q9BTC0 2240 aaKnown RBP16.08■□□□□ 0.16
LRRC28-210ENST00000558879 NAV2Q8IVL1 2488 aa16.08■□□□□ 0.16
LRRC28-210ENST00000558879 DOPEY1Q5JWR5 2465 aa16.07■□□□□ 0.16
LRRC28-210ENST00000558879 BLACEA4D250 179 aa16.07■□□□□ 0.16
LRRC28-210ENST00000558879 SGK494L7N484 410 aa16.07■□□□□ 0.16
LRRC28-210ENST00000558879 NDUFS4O43181 175 aa16.07■□□□□ 0.16
LRRC28-210ENST00000558879 SEMA7AO75326 666 aa16.07■□□□□ 0.16
LRRC28-210ENST00000558879 RDH16O75452 317 aa16.07■□□□□ 0.16
LRRC28-210ENST00000558879 PIAS1O75925 651 aa16.07■□□□□ 0.16
LRRC28-210ENST00000558879 CBX6O95503 412 aa16.07■□□□□ 0.16
LRRC28-210ENST00000558879 AHRP35869 848 aa16.07■□□□□ 0.16
LRRC28-210ENST00000558879 SCTRP47872 440 aa16.07■□□□□ 0.16
LRRC28-210ENST00000558879 PWP1Q13610 501 aa16.07■□□□□ 0.16
LRRC28-210ENST00000558879 NR6A1Q15406 480 aa16.07■□□□□ 0.16
LRRC28-210ENST00000558879 CAPN12Q6ZSI9 719 aa16.07■□□□□ 0.16
LRRC28-210ENST00000558879 LANCL3Q6ZV70 420 aa16.07■□□□□ 0.16
LRRC28-210ENST00000558879 ZNF572Q7Z3I7 529 aaPredicted RBP16.07■□□□□ 0.16
LRRC28-210ENST00000558879 MAATS1Q7Z4T9 603 aa16.07■□□□□ 0.16
LRRC28-210ENST00000558879 ADAMTSL2Q86TH1 951 aa16.07■□□□□ 0.16
LRRC28-210ENST00000558879 NT5CQ8TCD5 201 aa16.07■□□□□ 0.16
LRRC28-210ENST00000558879 PYROXD1Q8WU10 500 aa16.07■□□□□ 0.16
LRRC28-210ENST00000558879 MOCOSQ96EN8 888 aa16.07■□□□□ 0.16
LRRC28-210ENST00000558879 GPR22Q99680 433 aa16.07■□□□□ 0.16
LRRC28-210ENST00000558879 TUBB6Q9BUF5 446 aa16.07■□□□□ 0.16
LRRC28-210ENST00000558879 SAYSD1Q9NPB0 183 aa16.07■□□□□ 0.16
LRRC28-210ENST00000558879 MAP10Q9P2G4 905 aa16.07■□□□□ 0.16
LRRC28-210ENST00000558879 ZFP69BQ9UJL9 534 aa16.07■□□□□ 0.16
LRRC28-210ENST00000558879 NAALAD2Q9Y3Q0 740 aa16.07■□□□□ 0.16
LRRC28-210ENST00000558879 MAST4O15021 2626 aa16.07■□□□□ 0.16
LRRC28-210ENST00000558879 CROCCQ5TZA2 2017 aa16.06■□□□□ 0.16
LRRC28-210ENST00000558879 TCRBV9S1A1TA0A576 114 aa16.06■□□□□ 0.16
LRRC28-210ENST00000558879 FAM159BA6NKW6 160 aa16.06■□□□□ 0.16
LRRC28-210ENST00000558879 CXorf49A8MYA2 514 aaPredicted RBP16.06■□□□□ 0.16
LRRC28-210ENST00000558879 E2F3O00716 465 aa16.06■□□□□ 0.16
LRRC28-210ENST00000558879 RNF224P0DH78 156 aa16.06■□□□□ 0.16
LRRC28-210ENST00000558879 ITGAMP11215 1152 aa16.06■□□□□ 0.16
LRRC28-210ENST00000558879 SAT1P21673 171 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms