RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 CUZD1Q86UP6 607 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 THOC6Q86W42 341 aaKnown RBP11.86□□□□□ -0.51
SMAD3-208ENST00000558827 PDSS2Q86YH6 399 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 ZADH2Q8N4Q0 377 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 NKAPQ8N5F7 415 aaKnown RBP11.86□□□□□ -0.51
SMAD3-208ENST00000558827 SIRT6Q8N6T7 355 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 PPM1NQ8N819 430 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 MFSD9Q8NBP5 474 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 CAMKVQ8NCB2 501 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 CATSPER1Q8NEC5 780 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 OR51Q1Q8NH59 317 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 FBXO25Q8TCJ0 367 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 EXT2Q93063 718 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 NEIL2Q969S2 332 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 PNPLA2Q96AD5 504 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 ESAMQ96AP7 390 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 HAUS8Q9BT25 410 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 ILKAPQ9H0C8 392 aaPredicted RBP11.86□□□□□ -0.51
SMAD3-208ENST00000558827 RHOJQ9H4E5 214 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 ASF1BQ9NVP2 202 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 C5AR2Q9P296 337 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 PTGFRNQ9P2B2 879 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 CORO1CQ9ULV4 474 aaPredicted RBP11.86□□□□□ -0.51
SMAD3-208ENST00000558827 VPS4AQ9UN37 437 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 SLC22A14Q9Y267 594 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 UTP11Q9Y3A2 253 aaKnown RBP11.86□□□□□ -0.51
SMAD3-208ENST00000558827 DYRK1BQ9Y463 629 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 RELNP78509 3460 aa11.86□□□□□ -0.51
SMAD3-208ENST00000558827 USP9XQ93008 2570 aaPredicted RBP11.85□□□□□ -0.51
SMAD3-208ENST00000558827 IGLV3-12A0A075B6K2 115 aa11.85□□□□□ -0.51
SMAD3-208ENST00000558827 NSG1A0A0A6YYJ2 146 aa11.85□□□□□ -0.51
SMAD3-208ENST00000558827 TCRBV9S1A1TA0A576 114 aa11.85□□□□□ -0.51
SMAD3-208ENST00000558827 PRPF4O43172 522 aaKnown RBP eCLIP11.85□□□□□ -0.511e-11■□□□□ 11.3
SMAD3-208ENST00000558827 NDUFS4O43181 175 aa11.85□□□□□ -0.51
SMAD3-208ENST00000558827 BMP10O95393 424 aa11.85□□□□□ -0.51
SMAD3-208ENST00000558827 HPP00738 406 aa11.85□□□□□ -0.51
SMAD3-208ENST00000558827 UQCRHP07919 91 aa11.85□□□□□ -0.51
SMAD3-208ENST00000558827 CCDC166P0CW27 439 aa11.85□□□□□ -0.51
SMAD3-208ENST00000558827 COX6A1P12074 109 aa11.85□□□□□ -0.51
SMAD3-208ENST00000558827 HRH2P25021 359 aa11.85□□□□□ -0.51
SMAD3-208ENST00000558827 MAGEA4P43358 317 aa11.85□□□□□ -0.51
SMAD3-208ENST00000558827 XCR1P46094 333 aa11.85□□□□□ -0.51
SMAD3-208ENST00000558827 EMP3P54852 163 aa11.85□□□□□ -0.51
SMAD3-208ENST00000558827 AP1S2P56377 157 aa11.85□□□□□ -0.51
SMAD3-208ENST00000558827 RAB8AP61006 207 aa11.85□□□□□ -0.51
SMAD3-208ENST00000558827 UBAP2LQ14157 1087 aaKnown RBP11.85□□□□□ -0.51
SMAD3-208ENST00000558827 EIF2S3LQ2VIR3 472 aaKnown RBP11.85□□□□□ -0.51
SMAD3-208ENST00000558827 UBAP2Q5T6F2 1119 aaKnown RBP11.85□□□□□ -0.51
SMAD3-208ENST00000558827 AGAP7PQ5VUJ5 663 aa11.85□□□□□ -0.51
SMAD3-208ENST00000558827 B3GNTL1Q67FW5 361 aaPredicted RBP11.85□□□□□ -0.51
SMAD3-208ENST00000558827 TMEM214Q6NUQ4 689 aaKnown RBP11.85□□□□□ -0.51
SMAD3-208ENST00000558827 FRA10AC1Q70Z53 315 aa11.85□□□□□ -0.51
SMAD3-208ENST00000558827 TMPRSS11BQ86T26 416 aa11.85□□□□□ -0.51
SMAD3-208ENST00000558827 DNAJB14Q8TBM8 379 aa11.85□□□□□ -0.51
SMAD3-208ENST00000558827 BRIX1Q8TDN6 353 aaKnown RBP11.85□□□□□ -0.51
SMAD3-208ENST00000558827 SLC5A11Q8WWX8 675 aa11.85□□□□□ -0.51
SMAD3-208ENST00000558827 ATL1Q8WXF7 558 aa11.85□□□□□ -0.51
SMAD3-208ENST00000558827 SNRNP40Q96DI7 357 aaKnown RBP11.85□□□□□ -0.51
SMAD3-208ENST00000558827 TM4SF19Q96DZ7 209 aa11.85□□□□□ -0.51
SMAD3-208ENST00000558827 PEX11GQ96HA9 241 aa11.85□□□□□ -0.51
SMAD3-208ENST00000558827 PDLIM5Q96HC4 596 aaKnown RBP11.85□□□□□ -0.51
SMAD3-208ENST00000558827 AGAP4Q96P64 663 aa11.85□□□□□ -0.51
SMAD3-208ENST00000558827 LRRC1Q9BTT6 524 aa11.85□□□□□ -0.51
SMAD3-208ENST00000558827 LHPPQ9H008 270 aa11.85□□□□□ -0.51
SMAD3-208ENST00000558827 RHBGQ9H310 441 aa11.85□□□□□ -0.51
SMAD3-208ENST00000558827 ANKHQ9HCJ1 492 aa11.85□□□□□ -0.51
SMAD3-208ENST00000558827 MKKSQ9NPJ1 570 aaPredicted RBP11.85□□□□□ -0.51
SMAD3-208ENST00000558827 TXNDC16Q9P2K2 825 aa11.85□□□□□ -0.51
SMAD3-208ENST00000558827 NTNG1Q9Y2I2 539 aa11.85□□□□□ -0.51
SMAD3-208ENST00000558827 NAALAD2Q9Y3Q0 740 aa11.85□□□□□ -0.51
SMAD3-208ENST00000558827 UTP20O75691 2785 aaKnown RBP11.84□□□□□ -0.51
SMAD3-208ENST00000558827 KCNE1BA0A087WTH5 132 aa11.84□□□□□ -0.51
SMAD3-208ENST00000558827 A0A0G2JN53 185 aa11.84□□□□□ -0.51
SMAD3-208ENST00000558827 TCP11X1B4DZS4 312 aa11.84□□□□□ -0.51
SMAD3-208ENST00000558827 SEC24DO94855 1032 aaPredicted RBP11.84□□□□□ -0.51
SMAD3-208ENST00000558827 WDR47O94967 919 aa11.84□□□□□ -0.51
SMAD3-208ENST00000558827 ZNF888P0CJ79 500 aaPredicted RBP11.84□□□□□ -0.51
SMAD3-208ENST00000558827 CCND1P24385 295 aa11.84□□□□□ -0.51
SMAD3-208ENST00000558827 RELAQ04206 551 aa11.84□□□□□ -0.51
SMAD3-208ENST00000558827 FAM53BQ14153 422 aa11.84□□□□□ -0.51
SMAD3-208ENST00000558827 PPP1R3AQ16821 1122 aa11.84□□□□□ -0.51
SMAD3-208ENST00000558827 KBTBD12Q3ZCT8 623 aa11.84□□□□□ -0.51
SMAD3-208ENST00000558827 DEFB134Q4QY38 66 aa11.84□□□□□ -0.51
SMAD3-208ENST00000558827 NDUFAF7Q7L592 441 aa11.84□□□□□ -0.51
SMAD3-208ENST00000558827 CMC1Q7Z7K0 106 aa11.84□□□□□ -0.51
SMAD3-208ENST00000558827 KBTBD2Q8IY47 623 aa11.84□□□□□ -0.51
SMAD3-208ENST00000558827 ABHD11Q8NFV4 315 aa11.84□□□□□ -0.51
SMAD3-208ENST00000558827 FBF1Q8TES7 1133 aa11.84□□□□□ -0.51
SMAD3-208ENST00000558827 CDKL2Q92772 493 aa11.84□□□□□ -0.51
SMAD3-208ENST00000558827 THAP11Q96EK4 314 aa11.84□□□□□ -0.51
SMAD3-208ENST00000558827 MVB12AQ96EY5 273 aa11.84□□□□□ -0.51
SMAD3-208ENST00000558827 MCMBPQ9BTE3 642 aa11.84□□□□□ -0.51
SMAD3-208ENST00000558827 VN1R1Q9GZP7 353 aa11.84□□□□□ -0.51
SMAD3-208ENST00000558827 KLHL31Q9H511 634 aa11.84□□□□□ -0.51
SMAD3-208ENST00000558827 LRRC4CQ9HCJ2 640 aa11.84□□□□□ -0.51
SMAD3-208ENST00000558827 B3GNT3Q9Y2A9 372 aa11.84□□□□□ -0.51
SMAD3-208ENST00000558827 IGHV1-45A0A0A0MS14 117 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 TRBC2A0A5B9 178 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 FAM159BA6NKW6 160 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 A8MUI8 341 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms