RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 SCTRP47872 440 aa13.14□□□□□ -0.31
TSPAN3-205ENST00000558745 REEP5Q00765 189 aa13.14□□□□□ -0.31
TSPAN3-205ENST00000558745 CDC16Q13042 620 aa13.14□□□□□ -0.31
TSPAN3-205ENST00000558745 SLBPQ14493 270 aaKnown RBP eCLIP13.14□□□□□ -0.31
TSPAN3-205ENST00000558745 NKG7Q16617 165 aa13.14□□□□□ -0.31
TSPAN3-205ENST00000558745 PFKFB4Q16877 469 aa13.14□□□□□ -0.31
TSPAN3-205ENST00000558745 CPZQ66K79 652 aa13.14□□□□□ -0.31
TSPAN3-205ENST00000558745 ADNP2Q6IQ32 1131 aa13.14□□□□□ -0.31
TSPAN3-205ENST00000558745 BORAQ6PGQ7 559 aa13.14□□□□□ -0.31
TSPAN3-205ENST00000558745 LAPTM4BQ86VI4 370 aa13.14□□□□□ -0.31
TSPAN3-205ENST00000558745 TCAIMQ8N3R3 496 aa13.14□□□□□ -0.31
TSPAN3-205ENST00000558745 AMER2Q8N7J2 671 aa13.14□□□□□ -0.31
TSPAN3-205ENST00000558745 EIF1ADQ8N9N8 165 aaKnown RBP13.14□□□□□ -0.31
TSPAN3-205ENST00000558745 THAP11Q96EK4 314 aa13.14□□□□□ -0.31
TSPAN3-205ENST00000558745 SCYL1Q96KG9 808 aa13.14□□□□□ -0.31
TSPAN3-205ENST00000558745 TRIM55Q9BYV6 548 aa13.14□□□□□ -0.31
TSPAN3-205ENST00000558745 KLHL31Q9H511 634 aa13.14□□□□□ -0.31
TSPAN3-205ENST00000558745 PELI2Q9HAT8 420 aa13.14□□□□□ -0.31
TSPAN3-205ENST00000558745 GEMIN8Q9NWZ8 242 aaKnown RBP13.14□□□□□ -0.31
TSPAN3-205ENST00000558745 NUDT4Q9NZJ9 180 aa13.14□□□□□ -0.31
TSPAN3-205ENST00000558745 CPSF2Q9P2I0 782 aaKnown RBP13.14□□□□□ -0.31
TSPAN3-205ENST00000558745 POLHQ9Y253 713 aa13.14□□□□□ -0.31
TSPAN3-205ENST00000558745 KCNMB2Q9Y691 235 aa13.14□□□□□ -0.31
TSPAN3-205ENST00000558745 PIEZO2Q9H5I5 2752 aa13.14□□□□□ -0.31
TSPAN3-205ENST00000558745 MED13Q9UHV7 2174 aa13.14□□□□□ -0.31
TSPAN3-205ENST00000558745 A0A1W2PPM1 405 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 SMIM23A6NLE4 172 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 SGK494L7N484 410 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 NDUFS4O43181 175 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 SIX3O95343 332 aaPredicted RBP13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 ITGB2P05107 769 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 GNAZP19086 355 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 CD22P20273 847 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 FOLR3P41439 243 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 CCR10P46092 362 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 POLE2P56282 527 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 ATP1A4Q13733 1029 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 DOC2AQ14183 400 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 CRTC2Q53ET0 693 aaPredicted RBP13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 TECRLQ5HYJ1 363 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 CDKL4Q5MAI5 379 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 TMEM214Q6NUQ4 689 aaKnown RBP13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 TAOK1Q7L7X3 1001 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 PDSS2Q86YH6 399 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 CYP4X1Q8N118 509 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 AMER3Q8N944 861 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 CAMKVQ8NCB2 501 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 OR2Y1Q8NGV0 311 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 OR2W6PQ8NHA6 318 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 RHEBL1Q8TAI7 183 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 SPSB2Q99619 263 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 AIF1LQ9BQI0 150 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 SARGQ9BW04 601 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 AICDAQ9GZX7 198 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 ZNF490Q9ULM2 529 aaPredicted RBP13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 MAN2B2Q9Y2E5 1009 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 OR2W5A6NFC9 320 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 ZNF860A6NHJ4 632 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 J3QKU1 62 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 K7EM74 188 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 TXNDC9O14530 226 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 H2AFYO75367 372 aaKnown RBP13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 JRKO75564 520 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 C1QL1O75973 258 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 RECKO95980 971 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 SBK3P0C264 359 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 PIM1P11309 404 aaPredicted RBP13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 GFAPP14136 432 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 FBLP22087 321 aaKnown RBP13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 CNTFP26441 200 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 HSD17B3P37058 310 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 EMP3P54852 163 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 HYAL2Q12891 473 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 SSPNQ14714 243 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 PDK4Q16654 411 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 XKR6Q5GH73 641 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 LGSNQ5TDP6 509 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 GARNL3Q5VVW2 1013 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 ATG9BQ674R7 924 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 PRMT9Q6P2P2 845 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 TIFABQ6ZNK6 161 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 PPP1R32Q7Z5V6 425 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 TEX9Q8N6V9 391 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 STT3BQ8TCJ2 826 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 EPS8L3Q8TE67 593 aaKnown RBP13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 CREB3L4Q8TEY5 395 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 MZB1Q8WU39 189 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 APOBEC4Q8WW27 367 aaKnown RBP13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 PHF21BQ96EK2 531 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 CATSPER2Q96P56 530 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 C17orf62Q9BQA9 187 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 DRC3Q9H069 523 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 CNOT10Q9H9A5 744 aaKnown RBP13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 ACSS2Q9NR19 701 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 TMEM216Q9P0N5 145 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 HCN3Q9P1Z3 774 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 XPR1Q9UBH6 696 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 TRPC4Q9UBN4 977 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 ZFP69BQ9UJL9 534 aa13.13□□□□□ -0.31
TSPAN3-205ENST00000558745 VSTM2BA6NLU5 285 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms