RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 SPATA13Q96N96 652 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 MOGAT1Q96PD6 335 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 OSBPL9Q96SU4 736 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 TBL1YQ9BQ87 522 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 PTDSS2Q9BVG9 487 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 ACTRT3Q9BYD9 372 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 GBA3Q9H227 469 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 TMPRSS5Q9H3S3 457 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 LRRN3Q9H3W5 708 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 WDR26Q9H7D7 661 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 SYNDIG1Q9H7V2 258 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 CHRAC1Q9NRG0 131 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 PHPT1Q9NRX4 125 aaPredicted RBP4.14□□□□□ -1.75
SPG11-211ENST00000558561 OCIAD1Q9NX40 245 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 PKD2L2Q9NZM6 624 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 IL1RAPL1Q9NZN1 696 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 OGFRQ9NZT2 677 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 GALPQ9UBC7 116 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 AMACRQ9UHK6 382 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 LCMT1Q9UIC8 334 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 TTC7AQ9ULT0 858 aaPredicted RBP4.14□□□□□ -1.75
SPG11-211ENST00000558561 PSMD13Q9UNM6 376 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 SATB2Q9UPW6 733 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 ZNF148Q9UQR1 794 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.14□□□□□ -1.75
SPG11-211ENST00000558561 SNX13Q9Y5W8 968 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 SDK2Q58EX2 2172 aa4.14□□□□□ -1.75
SPG11-211ENST00000558561 DSPP15924 2871 aaKnown RBP4.14□□□□□ -1.75
SPG11-211ENST00000558561 SCN2AQ99250 2005 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 A0A1W2PQ67 120 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 CCDC162PA2VCL2 907 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 KRT87PA6NCN2 255 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 OR52A4PA6NMU1 304 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 RHPN2P1A8MT19 583 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 IQCF5A8MTL0 148 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 MIF4GDA9UHW6 222 aaKnown RBP4.13□□□□□ -1.75
SPG11-211ENST00000558561 VWC2LB2RUY7 222 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 PYCARD-AS1I3L0S3 204 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 CYR61O00622 381 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 CHUKO15111 745 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 KPNA5O15131 536 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 STX7O15400 261 aaKnown RBP4.13□□□□□ -1.75
SPG11-211ENST00000558561 KRT86O43790 486 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 PEX1O43933 1283 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 OR1I1O60431 355 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 CDK14O94921 469 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 ESRRBO95718 433 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 EPOP01588 193 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 POLBP06746 335 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 CHRM2P08172 466 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 CCDC175P0C221 793 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 FGF3P11487 239 aaPredicted RBP4.13□□□□□ -1.75
SPG11-211ENST00000558561 ZNF30P17039 623 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 ZNF7P17097 686 aaPredicted RBP4.13□□□□□ -1.75
SPG11-211ENST00000558561 TYRP1P17643 537 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 ITGB6P18564 788 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 WT1P19544 449 aaPredicted RBP4.13□□□□□ -1.75
SPG11-211ENST00000558561 NMBRP28336 390 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 PBLDP30039 288 aaPredicted RBP4.13□□□□□ -1.75
SPG11-211ENST00000558561 HMGCLP35914 325 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 ARCN1P48444 511 aaKnown RBP4.13□□□□□ -1.75
SPG11-211ENST00000558561 GEMP55040 296 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 WNT3P56703 355 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 GSDMDP57764 484 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 RPL26P61254 145 aaKnown RBP4.13□□□□□ -1.75
SPG11-211ENST00000558561 CCDC173Q0VFZ6 552 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 NFATC2Q13469 925 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 BRD3Q15059 726 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 TRADDQ15628 312 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 CCNG2Q16589 344 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 PARP6Q2NL67 630 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 COL28A1Q2UY09 1125 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 C14orf28Q4W4Y0 310 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 ZNF789Q5FWF6 425 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 FNBP1LQ5T0N5 605 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 ARHGAP40Q5TG30 622 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 HECTD2Q5U5R9 776 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 IYDQ6PHW0 289 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 ZNF534Q76KX8 674 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 BZW1Q7L1Q6 419 aaKnown RBP4.13□□□□□ -1.75
SPG11-211ENST00000558561 GLT6D1Q7Z4J2 308 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 TMPRSS12Q86WS5 348 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 ZFAND4Q86XD8 727 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 GKN2Q86XP6 184 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 CDKL3Q8IVW4 592 aaPredicted RBP4.13□□□□□ -1.75
SPG11-211ENST00000558561 CFAP206Q8IYR0 622 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 SYCE1Q8N0S2 351 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 NDUFAF2Q8N183 169 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 RASGEF1CQ8N431 466 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 FAM109AQ8N4B1 249 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 TRAM1L1Q8N609 369 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 AMER2Q8N7J2 671 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 OR13J1Q8NGT2 312 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 GPR150Q8NGU9 434 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 GDAP1Q8TB36 358 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 LKAAEAR1Q8TD35 194 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 BRSK1Q8TDC3 778 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 SLC37A2Q8TED4 501 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 FAM136AQ96C01 138 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 BBC3Q96PG8 261 aaPredicted RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms