RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 PDAP1Q13442 181 aaKnown RBP12.86□□□□□ -0.35
SNRPA1-204ENST00000558020 NSDHLQ15738 373 aa12.86□□□□□ -0.35
SNRPA1-204ENST00000558020 RNASEH2BQ5TBB1 312 aaKnown RBP12.86□□□□□ -0.35
SNRPA1-204ENST00000558020 DUPD1Q68J44 220 aa12.86□□□□□ -0.35
SNRPA1-204ENST00000558020 ZNF324BQ6AW86 544 aaPredicted RBP12.86□□□□□ -0.35
SNRPA1-204ENST00000558020 PAQR3Q6TCH7 311 aa12.86□□□□□ -0.35
SNRPA1-204ENST00000558020 LCTLQ6UWM7 567 aa12.86□□□□□ -0.35
SNRPA1-204ENST00000558020 VN1R4Q7Z5H5 301 aa12.86□□□□□ -0.35
SNRPA1-204ENST00000558020 FJX1Q86VR8 437 aa12.86□□□□□ -0.35
SNRPA1-204ENST00000558020 PDIK1LQ8N165 341 aa12.86□□□□□ -0.35
SNRPA1-204ENST00000558020 HORMAD2Q8N7B1 307 aa12.86□□□□□ -0.35
SNRPA1-204ENST00000558020 RELTQ969Z4 430 aa12.86□□□□□ -0.35
SNRPA1-204ENST00000558020 LINGO1Q96FE5 620 aa12.86□□□□□ -0.35
SNRPA1-204ENST00000558020 TAAR6Q96RI8 345 aa12.86□□□□□ -0.35
SNRPA1-204ENST00000558020 OSBPL9Q96SU4 736 aa12.86□□□□□ -0.35
SNRPA1-204ENST00000558020 NDNQ99608 321 aa12.86□□□□□ -0.35
SNRPA1-204ENST00000558020 SGPP1Q9BX95 441 aa12.86□□□□□ -0.35
SNRPA1-204ENST00000558020 ATG10Q9H0Y0 220 aa12.86□□□□□ -0.35
SNRPA1-204ENST00000558020 SUCOQ9UBS9 1254 aaKnown RBP12.86□□□□□ -0.35
SNRPA1-204ENST00000558020 ADAMTS6Q9UKP5 1117 aa12.86□□□□□ -0.35
SNRPA1-204ENST00000558020 CORO1CQ9ULV4 474 aaPredicted RBP12.86□□□□□ -0.35
SNRPA1-204ENST00000558020 CACNA1DQ01668 2161 aa12.86□□□□□ -0.35
SNRPA1-204ENST00000558020 CREBBPQ92793 2442 aa12.86□□□□□ -0.35
SNRPA1-204ENST00000558020 DIDO1Q9BTC0 2240 aaKnown RBP12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 ZGRF1Q86YA3 2104 aa12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 FEZF1A0PJY2 475 aa12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 SGK494L7N484 410 aa12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 CDK2AP1O14519 115 aa12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 HNRNPRO43390 633 aaKnown RBP12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 ZG16O60844 167 aa12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 F10P00742 488 aa12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 AHSGP02765 367 aa12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 STATHP02808 62 aa12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 CELA2AP08217 269 aa12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 F7P08709 466 aaPredicted RBP12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 CDH1P12830 882 aa12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 IL1RNP18510 177 aa12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 PWP1Q13610 501 aa12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 NAA30Q147X3 362 aaPredicted RBP12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 ACER2Q5QJU3 275 aa12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 GALNT7Q86SF2 657 aa12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 SLC26A11Q86WA9 606 aa12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 AGGF1Q8N302 714 aaeCLIP12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 MFSD9Q8NBP5 474 aa12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 KCT2Q8NC54 265 aa12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 ABHD11Q8NFV4 315 aa12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 M1APQ8TC57 530 aa12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 SNF8Q96H20 258 aa12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 OR1F2PQ96R84 312 aa12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 LPAR4Q99677 370 aa12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 MACROD1Q9BQ69 325 aa12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 KCNK13Q9HB14 408 aa12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 HCN3Q9P1Z3 774 aa12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 COPG2Q9UBF2 871 aa12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 SEC14L3Q9UDX4 400 aa12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 ENTPD4Q9Y227 616 aa12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 VWA7Q9Y334 891 aa12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 NAALAD2Q9Y3Q0 740 aa12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 PCDHGB6Q9Y5F9 930 aa12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 NBPF19A0A087WUL8 3843 aa12.85□□□□□ -0.35
SNRPA1-204ENST00000558020 URADA6NGE7 173 aa12.84□□□□□ -0.35
SNRPA1-204ENST00000558020 DNALI1O14645 258 aaPredicted RBP12.84□□□□□ -0.35
SNRPA1-204ENST00000558020 TTI1O43156 1089 aa12.84□□□□□ -0.35
SNRPA1-204ENST00000558020 OR1F1O43749 312 aa12.84□□□□□ -0.35
SNRPA1-204ENST00000558020 LCMT2O60294 686 aaKnown RBP12.84□□□□□ -0.35
SNRPA1-204ENST00000558020 UNC5CO95185 931 aa12.84□□□□□ -0.35
SNRPA1-204ENST00000558020 ENO2P09104 434 aaPredicted RBP12.84□□□□□ -0.35
SNRPA1-204ENST00000558020 JAK1P23458 1154 aa12.84□□□□□ -0.35
SNRPA1-204ENST00000558020 CDKN2DP55273 166 aa12.84□□□□□ -0.35
SNRPA1-204ENST00000558020 KCNK10P57789 538 aa12.84□□□□□ -0.35
SNRPA1-204ENST00000558020 TAS2R50P59544 299 aa12.84□□□□□ -0.35
SNRPA1-204ENST00000558020 MEF2AQ02078 507 aaPredicted RBP12.84□□□□□ -0.35
SNRPA1-204ENST00000558020 RGS1Q08116 209 aa12.84□□□□□ -0.35
SNRPA1-204ENST00000558020 DHX9Q08211 1270 aaKnown RBP12.84□□□□□ -0.35
SNRPA1-204ENST00000558020 CSHL1Q14406 222 aa12.84□□□□□ -0.35
SNRPA1-204ENST00000558020 ABRAXAS2Q15018 415 aa12.84□□□□□ -0.35
SNRPA1-204ENST00000558020 MEP1AQ16819 746 aa12.84□□□□□ -0.35
SNRPA1-204ENST00000558020 C1QL3Q5VWW1 255 aa12.84□□□□□ -0.35
SNRPA1-204ENST00000558020 H3F3CQ6NXT2 135 aa12.84□□□□□ -0.35
SNRPA1-204ENST00000558020 ANKRD37Q7Z713 158 aa12.84□□□□□ -0.35
SNRPA1-204ENST00000558020 CNTN4Q8IWV2 1026 aa12.84□□□□□ -0.35
SNRPA1-204ENST00000558020 SLC5A8Q8N695 610 aa12.84□□□□□ -0.35
SNRPA1-204ENST00000558020 GPATCH11Q8N954 259 aa12.84□□□□□ -0.35
SNRPA1-204ENST00000558020 PLPP5Q8NEB5 264 aa12.84□□□□□ -0.35
SNRPA1-204ENST00000558020 OR4K1Q8NGD4 311 aa12.84□□□□□ -0.35
SNRPA1-204ENST00000558020 ZCCHC10Q8TBK6 192 aa12.84□□□□□ -0.35
SNRPA1-204ENST00000558020 CERS2Q96G23 380 aa12.84□□□□□ -0.35
SNRPA1-204ENST00000558020 UTP23Q9BRU9 249 aaKnown RBP12.84□□□□□ -0.35
SNRPA1-204ENST00000558020 CLK4Q9HAZ1 481 aaKnown RBP12.84□□□□□ -0.35
SNRPA1-204ENST00000558020 SNX12Q9UMY4 172 aa12.84□□□□□ -0.35
SNRPA1-204ENST00000558020 TRGV8A0A0C4DH27 118 aa12.83□□□□□ -0.36
SNRPA1-204ENST00000558020 IGHV3-20A0A0C4DH32 117 aa12.83□□□□□ -0.36
SNRPA1-204ENST00000558020 TRBC2A0A5B9 178 aa12.83□□□□□ -0.36
SNRPA1-204ENST00000558020 MAGEB17A8MXT2 336 aa12.83□□□□□ -0.36
SNRPA1-204ENST00000558020 NDUFS4O43181 175 aa12.83□□□□□ -0.36
SNRPA1-204ENST00000558020 RDH16O75452 317 aa12.83□□□□□ -0.36
SNRPA1-204ENST00000558020 SERPIND1P05546 499 aa12.83□□□□□ -0.36
SNRPA1-204ENST00000558020 CD46P15529 392 aa12.83□□□□□ -0.36
SNRPA1-204ENST00000558020 TCP1P17987 556 aaKnown RBP12.83□□□□□ -0.36
SNRPA1-204ENST00000558020 GABRB3P28472 473 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms