RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 DRC3Q9H069 523 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 VPS11Q9H270 941 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 SYNPO2LQ9H987 977 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 SLC22A11Q9NSA0 550 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 DNAJC11Q9NVH1 559 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 GEMIN8Q9NWZ8 242 aaKnown RBP11.89□□□□□ -0.51
SLIRP-211ENST00000557623 ZNF282Q9UDV7 671 aaPredicted RBP11.89□□□□□ -0.51
SLIRP-211ENST00000557623 FETUBQ9UGM5 382 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 TUBD1Q9UJT1 453 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 PTBP2Q9UKA9 531 aaKnown RBP11.89□□□□□ -0.51
SLIRP-211ENST00000557623 KCNMB2Q9Y691 235 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 MAU2Q9Y6X3 613 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 TRIM49D1C9J1S8 452 aa11.88□□□□□ -0.51
SLIRP-211ENST00000557623 P2RX6O15547 441 aa11.88□□□□□ -0.51
SLIRP-211ENST00000557623 SLU7O95391 586 aaKnown RBP11.88□□□□□ -0.51
SLIRP-211ENST00000557623 MED26O95402 600 aa11.88□□□□□ -0.51
SLIRP-211ENST00000557623 IGHEP01854 428 aa11.88□□□□□ -0.51
SLIRP-211ENST00000557623 C1GALT1C1LP0DN25 315 aa11.88□□□□□ -0.51
SLIRP-211ENST00000557623 AHRP35869 848 aa11.88□□□□□ -0.51
SLIRP-211ENST00000557623 GMPRP36959 345 aa11.88□□□□□ -0.51
SLIRP-211ENST00000557623 GDF5P43026 501 aa11.88□□□□□ -0.51
SLIRP-211ENST00000557623 SCTRP47872 440 aa11.88□□□□□ -0.51
SLIRP-211ENST00000557623 KCNC1P48547 511 aa11.88□□□□□ -0.51
SLIRP-211ENST00000557623 HSPA7P48741 367 aa11.88□□□□□ -0.51
SLIRP-211ENST00000557623 REEP5Q00765 189 aa11.88□□□□□ -0.51
SLIRP-211ENST00000557623 IRF9Q00978 393 aa11.88□□□□□ -0.51
SLIRP-211ENST00000557623 MEF2AQ02078 507 aaPredicted RBP11.88□□□□□ -0.51
SLIRP-211ENST00000557623 RGS1Q08116 209 aa11.88□□□□□ -0.51
SLIRP-211ENST00000557623 PWP1Q13610 501 aa11.88□□□□□ -0.51
SLIRP-211ENST00000557623 LY6DQ14210 128 aa11.88□□□□□ -0.51
SLIRP-211ENST00000557623 SLC29A2Q14542 456 aa11.88□□□□□ -0.51
SLIRP-211ENST00000557623 NKG7Q16617 165 aa11.88□□□□□ -0.51
SLIRP-211ENST00000557623 TSNAXIP1Q2TAA8 658 aa11.88□□□□□ -0.51
SLIRP-211ENST00000557623 C18orf21Q32NC0 220 aaPredicted RBP11.88□□□□□ -0.51
SLIRP-211ENST00000557623 ATG9BQ674R7 924 aa11.88□□□□□ -0.51
SLIRP-211ENST00000557623 NIPAL1Q6NVV3 410 aa11.88□□□□□ -0.51
SLIRP-211ENST00000557623 LRRC70Q7Z2Q7 622 aa11.88□□□□□ -0.51
SLIRP-211ENST00000557623 APLFQ8IW19 511 aaPredicted RBP11.88□□□□□ -0.51
SLIRP-211ENST00000557623 GSPT2Q8IYD1 628 aaKnown RBP11.88□□□□□ -0.51
SLIRP-211ENST00000557623 KRT78Q8N1N4 520 aa11.88□□□□□ -0.51
SLIRP-211ENST00000557623 ARHGEF39Q8N4T4 335 aa11.88□□□□□ -0.51
SLIRP-211ENST00000557623 METTL27Q8N6F8 245 aaPredicted RBP11.88□□□□□ -0.51
SLIRP-211ENST00000557623 SNX31Q8N9S9 440 aa11.88□□□□□ -0.51
SLIRP-211ENST00000557623 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.88□□□□□ -0.51
SLIRP-211ENST00000557623 MMABQ96EY8 250 aaPredicted RBP11.88□□□□□ -0.51
SLIRP-211ENST00000557623 CD244Q9BZW8 370 aa11.88□□□□□ -0.51
SLIRP-211ENST00000557623 PITHD1Q9GZP4 211 aaPredicted RBP11.88□□□□□ -0.51
SLIRP-211ENST00000557623 EHD1Q9H4M9 534 aa11.88□□□□□ -0.51
SLIRP-211ENST00000557623 ZFP69BQ9UJL9 534 aa11.88□□□□□ -0.51
SLIRP-211ENST00000557623 IQANK1A0A1B0GTG1 560 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 URADA6NGE7 173 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 VSTM2BA6NLU5 285 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 H0YIG0 161 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 UBXN8O00124 270 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 PEX12O00623 359 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 CCNT2O60583 730 aaKnown RBP11.87□□□□□ -0.51
SLIRP-211ENST00000557623 CNOT3O75175 753 aaKnown RBP11.87□□□□□ -0.51
SLIRP-211ENST00000557623 NSA2O95478 260 aaKnown RBP11.87□□□□□ -0.51
SLIRP-211ENST00000557623 RBP1P09455 135 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 FAM87AP0C7U9 286 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 MYBL2P10244 700 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 GSTM2P28161 218 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 OTX2P32243 289 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 GLRBP48167 497 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 RRADP55042 308 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 SKP1P63208 163 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 KCNAB2Q13303 367 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 COL9A2Q14055 689 aaPredicted RBP11.87□□□□□ -0.51
SLIRP-211ENST00000557623 LAPTM4AQ15012 233 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 RBBP5Q15291 538 aaKnown RBP11.87□□□□□ -0.51
SLIRP-211ENST00000557623 PDK4Q16654 411 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 TMEM214Q6NUQ4 689 aaKnown RBP11.87□□□□□ -0.51
SLIRP-211ENST00000557623 TIFABQ6ZNK6 161 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 SLCO4C1Q6ZQN7 724 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 MED25Q71SY5 747 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 EXD3Q8N9H8 876 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 TMEM102Q8N9M5 508 aaPredicted RBP11.87□□□□□ -0.51
SLIRP-211ENST00000557623 TRPV3Q8NET8 790 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 TTLQ8NG68 377 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 NT5CQ8TCD5 201 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 UBTD2Q8WUN7 234 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 UBLCP1Q8WVY7 318 aaPredicted RBP11.87□□□□□ -0.51
SLIRP-211ENST00000557623 MIEF2Q96C03 454 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 SEC16BQ96JE7 1060 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 VPS50Q96JG6 964 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 YIPF2Q9BWQ6 316 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 NT5DC2Q9H857 520 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 ANKZF1Q9H8Y5 726 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 PPCSQ9HAB8 311 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 ANKHQ9HCJ1 492 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 MKKSQ9NPJ1 570 aaPredicted RBP11.87□□□□□ -0.51
SLIRP-211ENST00000557623 ACSS2Q9NR19 701 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 SEMA3GQ9NS98 782 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 C14orf105Q9NVL8 296 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 PSMC3IPQ9P2W1 217 aaPredicted RBP11.87□□□□□ -0.51
SLIRP-211ENST00000557623 TMCO1Q9UM00 188 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 MAP4K5Q9Y4K4 846 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 SLC22A7Q9Y694 548 aa11.87□□□□□ -0.51
SLIRP-211ENST00000557623 IGLV3-12A0A075B6K2 115 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 A0A0A6YYC8 382 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms