RNA–Protein interactions for RNA: ENST00000557549.5

RBM23-231, Transcript of RNA binding motif protein 23, human

TSL 3

Gene RBM23, Length 582 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM23-231	ENST00000557549	NIPAL1	Q6NVV3	410 aa		11.74	□□□□□ -0.53
RBM23-231	ENST00000557549	NXPE4	Q6UWF7	544 aa		11.74	□□□□□ -0.53
RBM23-231	ENST00000557549	TTLL10	Q6ZVT0	673 aa		11.74	□□□□□ -0.53
RBM23-231	ENST00000557549	ARHGEF39	Q8N4T4	335 aa		11.74	□□□□□ -0.53
RBM23-231	ENST00000557549	TTL	Q8NG68	377 aa		11.74	□□□□□ -0.53
RBM23-231	ENST00000557549	THAP4	Q8WY91	577 aa		11.74	□□□□□ -0.53
RBM23-231	ENST00000557549	CAVIN3	Q969G5	261 aa		11.74	□□□□□ -0.53
RBM23-231	ENST00000557549	TMEM79	Q9BSE2	394 aa		11.74	□□□□□ -0.53
RBM23-231	ENST00000557549	CD244	Q9BZW8	370 aa		11.74	□□□□□ -0.53
RBM23-231	ENST00000557549	SLC26A1	Q9H2B4	701 aa		11.74	□□□□□ -0.53
RBM23-231	ENST00000557549	NT5DC2	Q9H857	520 aa		11.74	□□□□□ -0.53
RBM23-231	ENST00000557549	WDR54	Q9H977	334 aa		11.74	□□□□□ -0.53
RBM23-231	ENST00000557549	SLC22A11	Q9NSA0	550 aa		11.74	□□□□□ -0.53
RBM23-231	ENST00000557549	DNAJC11	Q9NVH1	559 aa		11.74	□□□□□ -0.53
RBM23-231	ENST00000557549	IFT80	Q9P2H3	777 aa	Predicted RBP	11.74	□□□□□ -0.53
RBM23-231	ENST00000557549	COPG2	Q9UBF2	871 aa		11.74	□□□□□ -0.53
RBM23-231	ENST00000557549	NDOR1	Q9UHB4	597 aa		11.74	□□□□□ -0.53
RBM23-231	ENST00000557549	GPN3	Q9UHW5	284 aa	Predicted RBP	11.74	□□□□□ -0.53
RBM23-231	ENST00000557549	NXT1	Q9UKK6	140 aa	Known RBP	11.74	□□□□□ -0.53
RBM23-231	ENST00000557549	SH2B3	Q9UQQ2	575 aa		11.74	□□□□□ -0.53
RBM23-231	ENST00000557549	TP53TG5	Q9Y2B4	290 aa		11.74	□□□□□ -0.53
RBM23-231	ENST00000557549	TNPO3	Q9Y5L0	923 aa	Known RBP	11.74	□□□□□ -0.53
RBM23-231	ENST00000557549	NCF1B	A6NI72	391 aa	Predicted RBP	11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	NCF1C	A8MVU1	366 aa	Predicted RBP	11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	SUPT3H	B4E1H0	165 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549		J3QKU1	62 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	CLGN	O14967	610 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	SUPT3H	O75486	399 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	RFPL1	O75677	317 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	ZIC2	O95409	532 aa	Predicted RBP	11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	EIF2S1	P05198	315 aa	Known RBP	11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	GSTA1	P08263	222 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	NUDT17	P0C025	328 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	SLC35G6	P0C7Q6	338 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	C1GALT1C1L	P0DN25	315 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	MTHFD2	P13995	350 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	NCF1	P14598	390 aa	Predicted RBP	11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	ITGAX	P20702	1163 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	CASP2	P42575	452 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	SCTR	P47872	440 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	REEP5	Q00765	189 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	IRF9	Q00978	393 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	LAPTM5	Q13571	262 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	E2F2	Q14209	437 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	SETDB1	Q15047	1291 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	TBCC	Q15814	346 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	PDK4	Q16654	411 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	TECRL	Q5HYJ1	363 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	MRPL14	Q6P1L8	145 aa	Known RBP	11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	SLCO4C1	Q6ZQN7	724 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	OVCH1	Q7RTY7	1134 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	VN1R4	Q7Z5H5	301 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	ASPG	Q86U10	573 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	APLF	Q8IW19	511 aa	Predicted RBP	11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	KRT78	Q8N1N4	520 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	DTWD1	Q8N5C7	304 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	TRPV3	Q8NET8	790 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	AEN	Q8WTP8	325 aa	Known RBP	11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	WDR34	Q96EX3	536 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	IP6K3	Q96PC2	410 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	MRPL57	Q9BQC6	102 aa	Known RBP	11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	TRIM4	Q9C037	500 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	UNK	Q9C0B0	810 aa	Known RBP	11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	SYNPO2L	Q9H987	977 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	ZNF304	Q9HCX3	659 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	ZFP69B	Q9UJL9	534 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	RAB21	Q9UL25	225 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	RUVBL1	Q9Y265	456 aa	Known RBP	11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	SLC22A7	Q9Y694	548 aa		11.73	□□□□□ -0.53
RBM23-231	ENST00000557549	URAD	A6NGE7	173 aa		11.72	□□□□□ -0.53
RBM23-231	ENST00000557549		H0YIG0	161 aa		11.72	□□□□□ -0.53
RBM23-231	ENST00000557549	MKRN2OS	H3BPM6	223 aa		11.72	□□□□□ -0.53
RBM23-231	ENST00000557549	STX16-NPEPL1	H3BU86	382 aa		11.72	□□□□□ -0.53
RBM23-231	ENST00000557549		K7EPI3	171 aa		11.72	□□□□□ -0.53
RBM23-231	ENST00000557549	UBXN8	O00124	270 aa		11.72	□□□□□ -0.53
RBM23-231	ENST00000557549	STX16	O14662	325 aa		11.72	□□□□□ -0.53
RBM23-231	ENST00000557549	OR1F1	O43749	312 aa		11.72	□□□□□ -0.53
RBM23-231	ENST00000557549	LCMT2	O60294	686 aa	Known RBP	11.72	□□□□□ -0.53
RBM23-231	ENST00000557549	CDH16	O75309	829 aa		11.72	□□□□□ -0.53
RBM23-231	ENST00000557549	MED26	O95402	600 aa		11.72	□□□□□ -0.53
RBM23-231	ENST00000557549	PDGFA	P04085	211 aa		11.72	□□□□□ -0.53
RBM23-231	ENST00000557549	GFAP	P14136	432 aa		11.72	□□□□□ -0.53
RBM23-231	ENST00000557549	HPD	P32754	393 aa	Predicted RBP	11.72	□□□□□ -0.53
RBM23-231	ENST00000557549	DEK	P35659	375 aa	Known RBP	11.72	□□□□□ -0.53
RBM23-231	ENST00000557549	HSD17B3	P37058	310 aa		11.72	□□□□□ -0.53
RBM23-231	ENST00000557549	BCL6	P41182	706 aa		11.72	□□□□□ -0.53
RBM23-231	ENST00000557549	GDF5	P43026	501 aa		11.72	□□□□□ -0.53
RBM23-231	ENST00000557549	PIK3CG	P48736	1102 aa		11.72	□□□□□ -0.53
RBM23-231	ENST00000557549	HSPA7	P48741	367 aa		11.72	□□□□□ -0.53
RBM23-231	ENST00000557549	CCL11	P51671	97 aa		11.72	□□□□□ -0.53
RBM23-231	ENST00000557549	SKP1	P63208	163 aa		11.72	□□□□□ -0.53
RBM23-231	ENST00000557549	SSPN	Q14714	243 aa		11.72	□□□□□ -0.53
RBM23-231	ENST00000557549	NAA30	Q147X3	362 aa	Predicted RBP	11.72	□□□□□ -0.53
RBM23-231	ENST00000557549	PCBP2	Q15366	365 aa	Known RBP eCLIP	11.72	□□□□□ -0.53
RBM23-231	ENST00000557549	ERCC6L	Q2NKX8	1250 aa		11.72	□□□□□ -0.53
RBM23-231	ENST00000557549	LACTB2	Q53H82	288 aa	Predicted RBP	11.72	□□□□□ -0.53
RBM23-231	ENST00000557549	PAGE2B	Q5JRK9	111 aa		11.72	□□□□□ -0.53
RBM23-231	ENST00000557549	CATSPERE	Q5SY80	951 aa		11.72	□□□□□ -0.53
RBM23-231	ENST00000557549	TMEM214	Q6NUQ4	689 aa	Known RBP	11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms