RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 SH3BGRLO75368 114 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 ERN1O75460 977 aaKnown RBP11.96□□□□□ -0.49
SHMT2-233ENST00000557529 LRATO95237 230 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 FKBP9O95302 570 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 WNT1P04628 370 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 COX7A2P14406 83 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 PEBP1P30086 187 aaKnown RBP11.96□□□□□ -0.49
SHMT2-233ENST00000557529 AHRP35869 848 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 GSTM5P46439 218 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 UBE2IP63279 158 aaKnown RBP11.96□□□□□ -0.49
SHMT2-233ENST00000557529 ZXDAP98168 799 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 SLC34A1Q06495 639 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 LRRC74AQ0VAA2 488 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 ELOCQ15369 112 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 ZNF542PQ5EBM4 170 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 C6orf10Q5SRN2 563 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 NANOGP8Q6NSW7 305 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 IKBIPQ70UQ0 350 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 R3HCC1LQ7Z5L2 792 aaKnown RBP11.96□□□□□ -0.49
SHMT2-233ENST00000557529 CAMKMTQ7Z624 323 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 SLC9B2Q86UD5 537 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 KIAA2013Q8IYS2 634 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 ADGRF3Q8IZF5 1079 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 ANKRD53Q8N9V6 530 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 OR8J2Q8NGG1 315 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 DNAJB14Q8TBM8 379 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 SLC26A7Q8TE54 656 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 NELL1Q92832 810 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 EGLN2Q96KS0 407 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 HSPA12BQ96MM6 686 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 DPH7Q9BTV6 452 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 SARGQ9BW04 601 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 TRIM15Q9C019 465 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 TWSG1Q9GZX9 223 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 NANOGQ9H9S0 305 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 S100A14Q9HCY8 104 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 TM9SF3Q9HD45 589 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 SLC6A20Q9NP91 592 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 MYNNQ9NPC7 610 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 FAM120CQ9NX05 1096 aaKnown RBP11.96□□□□□ -0.49
SHMT2-233ENST00000557529 SPHK1Q9NYA1 384 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 CPNE7Q9UBL6 633 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 NKX1-2Q9UD57 310 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-233ENST00000557529 PCDHGA2Q9Y5H1 932 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 ENTPD2Q9Y5L3 495 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 SLCO1B1Q9Y6L6 691 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 UNC80Q8N2C7 3258 aa11.95□□□□□ -0.5
SHMT2-233ENST00000557529 A0A096LPI6 279 aa11.95□□□□□ -0.5
SHMT2-233ENST00000557529 BTN3A3O00478 584 aa11.95□□□□□ -0.5
SHMT2-233ENST00000557529 TCN1P20061 433 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-233ENST00000557529 TRPC1P48995 793 aa11.95□□□□□ -0.5
SHMT2-233ENST00000557529 MS4A2Q01362 244 aa11.95□□□□□ -0.5
SHMT2-233ENST00000557529 GPR18Q14330 331 aa11.95□□□□□ -0.5
SHMT2-233ENST00000557529 UGT8Q16880 541 aa11.95□□□□□ -0.5
SHMT2-233ENST00000557529 TMEM35AQ53FP2 167 aa11.95□□□□□ -0.5
SHMT2-233ENST00000557529 WDR45BQ5MNZ6 344 aa11.95□□□□□ -0.5
SHMT2-233ENST00000557529 LRIF1Q5T3J3 769 aa11.95□□□□□ -0.5
SHMT2-233ENST00000557529 CPTPQ5TA50 214 aa11.95□□□□□ -0.5
SHMT2-233ENST00000557529 ZNF425Q6IV72 752 aa11.95□□□□□ -0.5
SHMT2-233ENST00000557529 ZFP1Q6P2D0 407 aa11.95□□□□□ -0.5
SHMT2-233ENST00000557529 GKN2Q86XP6 184 aa11.95□□□□□ -0.5
SHMT2-233ENST00000557529 SDR16C5Q8N3Y7 309 aa11.95□□□□□ -0.5
SHMT2-233ENST00000557529 HIPK4Q8NE63 616 aa11.95□□□□□ -0.5
SHMT2-233ENST00000557529 TRPV3Q8NET8 790 aa11.95□□□□□ -0.5
SHMT2-233ENST00000557529 VPS37AQ8NEZ2 397 aa11.95□□□□□ -0.5
SHMT2-233ENST00000557529 BHLHE22Q8NFJ8 381 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-233ENST00000557529 CDC26Q8NHZ8 85 aa11.95□□□□□ -0.5
SHMT2-233ENST00000557529 NUDT8Q8WV74 236 aa11.95□□□□□ -0.5
SHMT2-233ENST00000557529 JPH3Q8WXH2 748 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-233ENST00000557529 DNASE2BQ8WZ79 361 aa11.95□□□□□ -0.5
SHMT2-233ENST00000557529 RGMAQ96B86 450 aa11.95□□□□□ -0.5
SHMT2-233ENST00000557529 PPM1MQ96MI6 270 aa11.95□□□□□ -0.5
SHMT2-233ENST00000557529 LRRC61Q9BV99 259 aa11.95□□□□□ -0.5
SHMT2-233ENST00000557529 MIR1-1HGQ9H1L0 117 aa11.95□□□□□ -0.5
SHMT2-233ENST00000557529 DUSP15Q9H1R2 295 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-233ENST00000557529 SLAMF8Q9P0V8 285 aa11.95□□□□□ -0.5
SHMT2-233ENST00000557529 ANKMY1Q9P2S6 941 aa11.95□□□□□ -0.5
SHMT2-233ENST00000557529 SPASTQ9UBP0 616 aa11.95□□□□□ -0.5
SHMT2-233ENST00000557529 ATP6V1HQ9UI12 483 aa11.95□□□□□ -0.5
SHMT2-233ENST00000557529 ADAM29Q9UKF5 820 aa11.95□□□□□ -0.5
SHMT2-233ENST00000557529 PCM1Q15154 2024 aa11.95□□□□□ -0.5
SHMT2-233ENST00000557529 PLXND1Q9Y4D7 1925 aa11.95□□□□□ -0.5
SHMT2-233ENST00000557529 FEZF1A0PJY2 475 aa11.94□□□□□ -0.5
SHMT2-233ENST00000557529 ARHGAP10A1A4S6 786 aa11.94□□□□□ -0.5
SHMT2-233ENST00000557529 SAP18O00422 153 aaKnown RBP11.94□□□□□ -0.5
SHMT2-233ENST00000557529 NDUFS4O43181 175 aa11.94□□□□□ -0.5
SHMT2-233ENST00000557529 CELA2BP08218 269 aaPredicted RBP11.94□□□□□ -0.5
SHMT2-233ENST00000557529 DDX5P17844 614 aaKnown RBP11.94□□□□□ -0.5
SHMT2-233ENST00000557529 MAOBP27338 520 aa11.94□□□□□ -0.5
SHMT2-233ENST00000557529 MSX2P35548 267 aaPredicted RBP11.94□□□□□ -0.5
SHMT2-233ENST00000557529 GCKP35557 465 aa11.94□□□□□ -0.5
SHMT2-233ENST00000557529 GSK3BP49841 420 aa11.94□□□□□ -0.5
SHMT2-233ENST00000557529 ARFIP1P53367 373 aa11.94□□□□□ -0.5
SHMT2-233ENST00000557529 NXPH1P58417 271 aa11.94□□□□□ -0.5
SHMT2-233ENST00000557529 CYP4F2P78329 520 aa11.94□□□□□ -0.5
SHMT2-233ENST00000557529 PHC1P78364 1004 aa11.94□□□□□ -0.5
SHMT2-233ENST00000557529 LIPEQ05469 1076 aa11.94□□□□□ -0.5
SHMT2-233ENST00000557529 C1orf61Q13536 156 aa11.94□□□□□ -0.5
SHMT2-233ENST00000557529 DUOXA1Q1HG43 343 aa11.94□□□□□ -0.5
SHMT2-233ENST00000557529 HKDC1Q2TB90 917 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms