RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 MAGED4Q96JG8 741 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 ZNF285Q96NJ3 590 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 SELENOSQ9BQE4 189 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 LACRTQ9GZZ8 138 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 CLEC4MQ9H2X3 399 aaPredicted RBP5.56□□□□□ -1.52
VPS33B-207ENST00000557470 MCCC2Q9HCC0 563 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 SMARCAL1Q9NZC9 954 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 STOX2Q9P2F5 926 aaPredicted RBP5.56□□□□□ -1.52
VPS33B-207ENST00000557470 ZNF282Q9UDV7 671 aaPredicted RBP5.56□□□□□ -1.52
VPS33B-207ENST00000557470 ZKSCAN5Q9Y2L8 839 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 CRYL1Q9Y2S2 319 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 MRPS2Q9Y399 296 aaKnown RBP5.56□□□□□ -1.52
VPS33B-207ENST00000557470 NEU2Q9Y3R4 380 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 PCDHGB6Q9Y5F9 930 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 ACANP16112 2415 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 IGLV3-12A0A075B6K2 115 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 hCG_1818297A0A087WSY0 165 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 LOC105369274A0A096LPK9 316 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 IGHV1-45A0A0A0MS14 117 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 LOC102723532A0A0G2JNH3 316 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 A0A1W2PQ72 361 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 OR5H15A6NDH6 313 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 SMTNL1A8MU46 457 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 VGLL3A8MV65 326 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 HACD1B0YJ81 288 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 IDSB3KWA1 339 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 H7C0S8 307 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 FFAR3O14843 346 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 GPR42O15529 346 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 SPOPO43791 374 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 BMP10O95393 424 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 NADKO95544 446 aaPredicted RBP5.55□□□□□ -1.52
VPS33B-207ENST00000557470 FTH1P02794 183 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 TP53P04637 393 aaPredicted RBP5.55□□□□□ -1.52
VPS33B-207ENST00000557470 UQCRHP07919 91 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 ITGAMP11215 1152 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 CD1EP15812 388 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 CD9P21926 228 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 COMTP21964 271 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 RBL1P28749 1068 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 CDC25BP30305 580 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 RAD52P43351 418 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 CLK1P49759 484 aaKnown RBP5.55□□□□□ -1.52
VPS33B-207ENST00000557470 CSE1LP55060 971 aaKnown RBP5.55□□□□□ -1.52
VPS33B-207ENST00000557470 CSNK1G2P78368 415 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 CACNG1Q06432 222 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 GRB7Q14451 532 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 ACAP2Q15057 778 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 ZKSCAN8Q15776 578 aaPredicted RBP5.55□□□□□ -1.52
VPS33B-207ENST00000557470 ASTE1Q2TB18 679 aaPredicted RBP5.55□□□□□ -1.52
VPS33B-207ENST00000557470 FAM214AQ32MH5 1076 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 SYTL3Q4VX76 610 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 DNAJC21Q5F1R6 531 aaKnown RBP5.55□□□□□ -1.52
VPS33B-207ENST00000557470 TFDP3Q5H9I0 405 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 TCTE1Q5JU00 501 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 WASHC2DQ5SRD0 308 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 ITPRIPL1Q6GPH6 555 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 FRMPD2BQ6IN97 320 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 PACS1Q6VY07 963 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 NEK10Q6ZWH5 1172 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 TMTC1Q8IUR5 882 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 VRK3Q8IV63 474 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 CCDC50Q8IVM0 306 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 OR4N4Q8N0Y3 316 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 ACBD4Q8NC06 268 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 CLRN3Q8NCR9 226 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 SUN3Q8TAQ9 357 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 TBC1D20Q96BZ9 403 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 C10orf90Q96M02 699 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 IL17FQ96PD4 163 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 C19orf43Q9BQ61 176 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 TBL1YQ9BQ87 522 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 RNF32Q9H0A6 362 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 VPS11Q9H270 941 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 RASSF4Q9H2L5 321 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 AKTIPQ9H8T0 292 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 ZNF304Q9HCX3 659 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 SMYD2Q9NRG4 433 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 RIC8BQ9NVN3 520 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 NLE1Q9NVX2 485 aaPredicted RBP5.55□□□□□ -1.52
VPS33B-207ENST00000557470 IL1RAPL1Q9NZN1 696 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.55□□□□□ -1.52
VPS33B-207ENST00000557470 IMPACTQ9P2X3 320 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 ZNF835Q9Y2P0 537 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 MEMO1Q9Y316 297 aa5.55□□□□□ -1.52
VPS33B-207ENST00000557470 CPAMD8Q8IZJ3 1885 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 A0A0J9YVX5 310 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 HYKKA2RU49 373 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 KRT87PA6NCN2 255 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 OR51F1A6NGY5 319 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 FAM227AF5H4B4 570 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 F8W735 103 aaPredicted RBP5.54□□□□□ -1.52
VPS33B-207ENST00000557470 H7C0C1 242 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 LINC01387J3KSC0 135 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 DYNC1I1O14576 645 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 ZNHIT1O43257 154 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 PSTPIP1O43586 416 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 KDM1AO60341 852 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 OR1I1O60431 355 aa5.54□□□□□ -1.52
VPS33B-207ENST00000557470 DLX3O60479 287 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms