RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 METTL27Q8N6F8 245 aaPredicted RBP10.16□□□□□ -0.78
LINC00239-201ENST00000556973 SNX31Q8N9S9 440 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 ZNF740Q8NDX6 193 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 TTLQ8NG68 377 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 NT5CQ8TCD5 201 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 ADAMTS17Q8TE56 1095 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 SLC39A7Q92504 469 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 EXT2Q93063 718 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 WDR34Q96EX3 536 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 MMABQ96EY8 250 aaPredicted RBP10.16□□□□□ -0.78
LINC00239-201ENST00000556973 SEC16BQ96JE7 1060 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 IP6K3Q96PC2 410 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 BBC3Q96PG8 261 aaPredicted RBP10.16□□□□□ -0.78
LINC00239-201ENST00000556973 MACROD1Q9BQ69 325 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 PPCSQ9HAB8 311 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 ANKHQ9HCJ1 492 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 ZNF358Q9NW07 568 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 GEMIN8Q9NWZ8 242 aaKnown RBP10.16□□□□□ -0.78
LINC00239-201ENST00000556973 PSMC3IPQ9P2W1 217 aaPredicted RBP10.16□□□□□ -0.78
LINC00239-201ENST00000556973 COPG2Q9UBF2 871 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 OPTCQ9UBM4 332 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 TMCO1Q9UM00 188 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 MAN2B2Q9Y2E5 1009 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 TNPO3Q9Y5L0 923 aaKnown RBP10.16□□□□□ -0.78
LINC00239-201ENST00000556973 SLC22A7Q9Y694 548 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 PTPRQQ9UMZ3 2332 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 IGLV3-12A0A075B6K2 115 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 A0A0A6YYC8 382 aaPredicted RBP10.15□□□□□ -0.78
LINC00239-201ENST00000556973 URADA6NGE7 173 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 EIF4E1BA6NMX2 242 aaKnown RBP10.15□□□□□ -0.78
LINC00239-201ENST00000556973 I3L1I5 382 aaPredicted RBP10.15□□□□□ -0.78
LINC00239-201ENST00000556973 NDUFS4O43181 175 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 CNOT3O75175 753 aaKnown RBP10.15□□□□□ -0.78
LINC00239-201ENST00000556973 NSA2O95478 260 aaKnown RBP10.15□□□□□ -0.78
LINC00239-201ENST00000556973 IGHEP01854 428 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 UMODP07911 640 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 ZGLP1P0C6A0 271 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 GFAPP14136 432 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 VARSP26640 1264 aaKnown RBP10.15□□□□□ -0.78
LINC00239-201ENST00000556973 CASP2P42575 452 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 ALDH18A1P54886 795 aaKnown RBP10.15□□□□□ -0.78
LINC00239-201ENST00000556973 POLE2P56282 527 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 RGS1Q08116 209 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 PCDH1Q08174 1060 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 DSG2Q14126 1118 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 LY6DQ14210 128 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 SETDB1Q15047 1291 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 RASA2Q15283 850 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 TBCCQ15814 346 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 HIST2H2ACQ16777 129 aaPredicted RBP10.15□□□□□ -0.78
LINC00239-201ENST00000556973 PFKFB4Q16877 469 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 XKR6Q5GH73 641 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 FAM69BQ5VUD6 431 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 HIST2H2AA3Q6FI13 130 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 NIPAL1Q6NVV3 410 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 METTL2BQ6P1Q9 378 aaKnown RBP10.15□□□□□ -0.78
LINC00239-201ENST00000556973 TMIGD1Q6UXZ0 262 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 DTWD1Q8N5C7 304 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 EXD3Q8N9H8 876 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 ANKRD53Q8N9V6 530 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 KCT2Q8NC54 265 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 STT3BQ8TCJ2 826 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 ACMSDQ8TDX5 336 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 UBTD2Q8WUN7 234 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 MIEF2Q96C03 454 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 MOCOSQ96EN8 888 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 PTCD3Q96EY7 689 aaKnown RBP10.15□□□□□ -0.78
LINC00239-201ENST00000556973 SCYL1Q96KG9 808 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 EFCAB11Q9BUY7 163 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 YIPF2Q9BWQ6 316 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 TGIF2Q9GZN2 237 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 SPNS1Q9H2V7 528 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 MKKSQ9NPJ1 570 aaPredicted RBP10.15□□□□□ -0.78
LINC00239-201ENST00000556973 DCDC2Q9UHG0 476 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 TUBD1Q9UJT1 453 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 MAP4K5Q9Y4K4 846 aa10.15□□□□□ -0.78
LINC00239-201ENST00000556973 ITPR1Q14643 2758 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 ANKDD1BA6NHY2 528 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 PEX12O00623 359 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 WFS1O76024 890 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 STATHP02808 62 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 SHBGP04278 402 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 SERPIND1P05546 499 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 TUBBP07437 444 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 SERPINA6P08185 405 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 FAM87AP0C7U9 286 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 EPB42P16452 691 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 EPORP19235 508 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 MMP11P24347 488 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 OTX2P32243 289 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 HPDP32754 393 aaPredicted RBP10.14□□□□□ -0.79
LINC00239-201ENST00000556973 HSD17B3P37058 310 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 AGTR2P50052 363 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 RRADP55042 308 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 SKP1P63208 163 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 IRF8Q02556 426 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 CHIT1Q13231 466 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 DOC2AQ14183 400 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 E2F2Q14209 437 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 NAA30Q147X3 362 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms