RNA–Protein interactions for RNA: ENST00000556971.1

ABCD4-226, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-226ENST00000556971 SPO11Q9Y5K1 396 aa11.11□□□□□ -0.63
ABCD4-226ENST00000556971 CD8B2A6NJW9 211 aa11.1□□□□□ -0.63
ABCD4-226ENST00000556971 A8MVJ9 347 aa11.1□□□□□ -0.63
ABCD4-226ENST00000556971 TGFAP01135 160 aa11.1□□□□□ -0.63
ABCD4-226ENST00000556971 MYL1P05976 194 aa11.1□□□□□ -0.63
ABCD4-226ENST00000556971 MMP2P08253 660 aa11.1□□□□□ -0.63
ABCD4-226ENST00000556971 CES1P23141 567 aa11.1□□□□□ -0.63
ABCD4-226ENST00000556971 PRLHRP49683 370 aa11.1□□□□□ -0.63
ABCD4-226ENST00000556971 DIO3P55073 304 aa11.1□□□□□ -0.63
ABCD4-226ENST00000556971 BECN1Q14457 450 aa11.1□□□□□ -0.63
ABCD4-226ENST00000556971 SF1Q15637 639 aaKnown RBP11.1□□□□□ -0.63
ABCD4-226ENST00000556971 NSDHLQ15738 373 aa11.1□□□□□ -0.63
ABCD4-226ENST00000556971 RNF187Q5TA31 235 aaPredicted RBP11.1□□□□□ -0.63
ABCD4-226ENST00000556971 RNF44Q7L0R7 432 aa11.1□□□□□ -0.63
ABCD4-226ENST00000556971 MED12LQ86YW9 2145 aa11.1□□□□□ -0.63
ABCD4-226ENST00000556971 NEIL3Q8TAT5 605 aa11.1□□□□□ -0.63
ABCD4-226ENST00000556971 ENOX1Q8TC92 643 aaKnown RBP11.1□□□□□ -0.63
ABCD4-226ENST00000556971 FAM81BQ96LP2 452 aa11.1□□□□□ -0.63
ABCD4-226ENST00000556971 BTBD9Q96Q07 612 aa11.1□□□□□ -0.63
ABCD4-226ENST00000556971 SELENOOQ9BVL4 669 aa11.1□□□□□ -0.63
ABCD4-226ENST00000556971 RBCK1Q9BYM8 510 aa11.1□□□□□ -0.63
ABCD4-226ENST00000556971 DEFB126Q9BYW3 111 aa11.1□□□□□ -0.63
ABCD4-226ENST00000556971 SEMA4BQ9NPR2 832 aaPredicted RBP11.1□□□□□ -0.63
ABCD4-226ENST00000556971 RBM22Q9NW64 420 aaKnown RBP eCLIP11.1□□□□□ -0.634e-6■■□□□ 13.3
ABCD4-226ENST00000556971 HPF1Q9NWY4 346 aa11.1□□□□□ -0.63
ABCD4-226ENST00000556971 TUBA8Q9NY65 449 aaPredicted RBP11.1□□□□□ -0.63
ABCD4-226ENST00000556971 CWC15Q9P013 229 aaKnown RBP11.1□□□□□ -0.63
ABCD4-226ENST00000556971 CIDEBQ9UHD4 219 aa11.1□□□□□ -0.63
ABCD4-226ENST00000556971 TRHDEQ9UKU6 1024 aa11.1□□□□□ -0.63
ABCD4-226ENST00000556971 TENM2Q9NT68 2774 aa11.1□□□□□ -0.63
ABCD4-226ENST00000556971 DYNC2H1Q8NCM8 4307 aaKnown RBP11.09□□□□□ -0.63
ABCD4-226ENST00000556971 GLYATL1P3A0A0U1RQE8 302 aa11.09□□□□□ -0.63
ABCD4-226ENST00000556971 H0YGG7 62 aa11.09□□□□□ -0.63
ABCD4-226ENST00000556971 CDC123O75794 336 aaPredicted RBP11.09□□□□□ -0.63
ABCD4-226ENST00000556971 DANCRP0C864 163 aa11.09□□□□□ -0.63
ABCD4-226ENST00000556971 SLC9A1P19634 815 aa11.09□□□□□ -0.63
ABCD4-226ENST00000556971 XCR1P46094 333 aa11.09□□□□□ -0.63
ABCD4-226ENST00000556971 ZNF143P52747 638 aaPredicted RBP11.09□□□□□ -0.63
ABCD4-226ENST00000556971 ARF3P61204 181 aaPredicted RBP11.09□□□□□ -0.63
ABCD4-226ENST00000556971 SNRPNP63162 240 aaKnown RBP11.09□□□□□ -0.63
ABCD4-226ENST00000556971 P3H1Q32P28 736 aa11.09□□□□□ -0.63
ABCD4-226ENST00000556971 LRRC8BQ6P9F7 803 aa11.09□□□□□ -0.63
ABCD4-226ENST00000556971 TMCO3Q6UWJ1 677 aa11.09□□□□□ -0.63
ABCD4-226ENST00000556971 MILR1Q7Z6M3 343 aa11.09□□□□□ -0.63
ABCD4-226ENST00000556971 ARMC10Q8N2F6 343 aa11.09□□□□□ -0.63
ABCD4-226ENST00000556971 CSNK1A1LQ8N752 337 aa11.09□□□□□ -0.63
ABCD4-226ENST00000556971 ZNF525Q8N782 197 aa11.09□□□□□ -0.63
ABCD4-226ENST00000556971 SLC30A5Q8TAD4 765 aa11.09□□□□□ -0.63
ABCD4-226ENST00000556971 RBMXL1Q96E39 390 aaKnown RBP11.09□□□□□ -0.63
ABCD4-226ENST00000556971 TRIB3Q96RU7 358 aa11.09□□□□□ -0.63
ABCD4-226ENST00000556971 PEBP4Q96S96 227 aa11.09□□□□□ -0.63
ABCD4-226ENST00000556971 PIGMQ9H3S5 423 aa11.09□□□□□ -0.63
ABCD4-226ENST00000556971 METTL17Q9H7H0 456 aaPredicted RBP11.09□□□□□ -0.63
ABCD4-226ENST00000556971 SMOXQ9NWM0 555 aa11.09□□□□□ -0.63
ABCD4-226ENST00000556971 HCN3Q9P1Z3 774 aa11.09□□□□□ -0.63
ABCD4-226ENST00000556971 CAMK2AQ9UQM7 478 aa11.09□□□□□ -0.63
ABCD4-226ENST00000556971 DLX3O60479 287 aa11.08□□□□□ -0.64
ABCD4-226ENST00000556971 MMEP08473 750 aa11.08□□□□□ -0.64
ABCD4-226ENST00000556971 MMP8P22894 467 aa11.08□□□□□ -0.64
ABCD4-226ENST00000556971 FMO4P31512 558 aa11.08□□□□□ -0.64
ABCD4-226ENST00000556971 UGT2B10P36537 528 aa11.08□□□□□ -0.64
ABCD4-226ENST00000556971 CD79BP40259 229 aa11.08□□□□□ -0.64
ABCD4-226ENST00000556971 SSR4P51571 173 aa11.08□□□□□ -0.64
ABCD4-226ENST00000556971 EMP3P54852 163 aa11.08□□□□□ -0.64
ABCD4-226ENST00000556971 DSCR9P59020 149 aa11.08□□□□□ -0.64
ABCD4-226ENST00000556971 CRYZQ08257 329 aaKnown RBP11.08□□□□□ -0.64
ABCD4-226ENST00000556971 ITGA9Q13797 1035 aa11.08□□□□□ -0.64
ABCD4-226ENST00000556971 PTK6Q13882 451 aa11.08□□□□□ -0.64
ABCD4-226ENST00000556971 ZNF658BQ4V348 819 aaPredicted RBP11.08□□□□□ -0.64
ABCD4-226ENST00000556971 ANKRD34AQ69YU3 496 aa11.08□□□□□ -0.64
ABCD4-226ENST00000556971 IL20RBQ6UXL0 311 aa11.08□□□□□ -0.64
ABCD4-226ENST00000556971 DNAJC14Q6Y2X3 702 aaPredicted RBP11.08□□□□□ -0.64
ABCD4-226ENST00000556971 FAM47EQ6ZV65 393 aa11.08□□□□□ -0.64
ABCD4-226ENST00000556971 TBC1D21Q8IYX1 336 aa11.08□□□□□ -0.64
ABCD4-226ENST00000556971 GCNT2Q8N0V5 402 aa11.08□□□□□ -0.64
ABCD4-226ENST00000556971 ZNF418Q8TF45 676 aaPredicted RBP11.08□□□□□ -0.64
ABCD4-226ENST00000556971 SLC44A1Q8WWI5 657 aa11.08□□□□□ -0.64
ABCD4-226ENST00000556971 PLPPR2Q96GM1 343 aa11.08□□□□□ -0.64
ABCD4-226ENST00000556971 IL17FQ96PD4 163 aa11.08□□□□□ -0.64
ABCD4-226ENST00000556971 CSPG4P5Q96PW8 444 aa11.08□□□□□ -0.64
ABCD4-226ENST00000556971 VPS16Q9H269 839 aa11.08□□□□□ -0.64
ABCD4-226ENST00000556971 ZNF703Q9H7S9 590 aaPredicted RBP11.08□□□□□ -0.64
ABCD4-226ENST00000556971 SYNPO2LQ9H987 977 aa11.08□□□□□ -0.64
ABCD4-226ENST00000556971 POLG2Q9UHN1 485 aa11.08□□□□□ -0.64
ABCD4-226ENST00000556971 PACSIN3Q9UKS6 424 aa11.08□□□□□ -0.64
ABCD4-226ENST00000556971 TRBV11-1A0A0K0K1C0 115 aa11.07□□□□□ -0.64
ABCD4-226ENST00000556971 CDC7O00311 574 aa11.07□□□□□ -0.64
ABCD4-226ENST00000556971 EPHB6O15197 1021 aa11.07□□□□□ -0.64
ABCD4-226ENST00000556971 KLF4O43474 513 aa11.07□□□□□ -0.64
ABCD4-226ENST00000556971 OR6B1O95007 311 aa11.07□□□□□ -0.64
ABCD4-226ENST00000556971 S1PR4O95977 384 aa11.07□□□□□ -0.64
ABCD4-226ENST00000556971 CNR1P21554 472 aa11.07□□□□□ -0.64
ABCD4-226ENST00000556971 PSMB5P28074 263 aa11.07□□□□□ -0.64
ABCD4-226ENST00000556971 ZNF165P49910 485 aa11.07□□□□□ -0.64
ABCD4-226ENST00000556971 BPIFB4P59827 614 aa11.07□□□□□ -0.64
ABCD4-226ENST00000556971 GALNT2Q10471 571 aa11.07□□□□□ -0.64
ABCD4-226ENST00000556971 GGTLC2Q14390 218 aa11.07□□□□□ -0.64
ABCD4-226ENST00000556971 PDK1Q15118 436 aa11.07□□□□□ -0.64
ABCD4-226ENST00000556971 ZNF750Q32MQ0 723 aa11.07□□□□□ -0.64
ABCD4-226ENST00000556971 ZNF449Q6P9G9 518 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms