RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 SMC6Q96SB8 1091 aa16.66■□□□□ 0.26
SHMT2-225ENST00000556798 NLNQ9BYT8 704 aa16.66■□□□□ 0.26
SHMT2-225ENST00000556798 EHD1Q9H4M9 534 aa16.66■□□□□ 0.26
SHMT2-225ENST00000556798 IPPKQ9H8X2 491 aa16.66■□□□□ 0.26
SHMT2-225ENST00000556798 MKS1Q9NXB0 559 aa16.66■□□□□ 0.26
SHMT2-225ENST00000556798 IL17BQ9UHF5 180 aa16.66■□□□□ 0.26
SHMT2-225ENST00000556798 MRPS18BQ9Y676 258 aaKnown RBP16.66■□□□□ 0.26
SHMT2-225ENST00000556798 MAU2Q9Y6X3 613 aa16.66■□□□□ 0.26
SHMT2-225ENST00000556798 CFAP47Q6ZTR5 3102 aa16.66■□□□□ 0.26
SHMT2-225ENST00000556798 DSPP15924 2871 aaKnown RBP16.65■□□□□ 0.26
SHMT2-225ENST00000556798 G3V2L1 256 aa16.65■□□□□ 0.26
SHMT2-225ENST00000556798 TXNDC9O14530 226 aa16.65■□□□□ 0.26
SHMT2-225ENST00000556798 OR7A17O14581 309 aa16.65■□□□□ 0.26
SHMT2-225ENST00000556798 WFS1O76024 890 aa16.65■□□□□ 0.26
SHMT2-225ENST00000556798 SLC35G6P0C7Q6 338 aa16.65■□□□□ 0.26
SHMT2-225ENST00000556798 MYL2P10916 166 aa16.65■□□□□ 0.26
SHMT2-225ENST00000556798 TSPAN8P19075 237 aa16.65■□□□□ 0.26
SHMT2-225ENST00000556798 TCN2P20062 427 aa16.65■□□□□ 0.26
SHMT2-225ENST00000556798 AGXTP21549 392 aa16.65■□□□□ 0.26
SHMT2-225ENST00000556798 CXCR2P25025 360 aa16.65■□□□□ 0.26
SHMT2-225ENST00000556798 AHRP35869 848 aa16.65■□□□□ 0.26
SHMT2-225ENST00000556798 ARL1P40616 181 aaPredicted RBP16.65■□□□□ 0.26
SHMT2-225ENST00000556798 OR1D4P47884 311 aa16.65■□□□□ 0.26
SHMT2-225ENST00000556798 PIK3CGP48736 1102 aa16.65■□□□□ 0.26
SHMT2-225ENST00000556798 DNASE1L3Q13609 305 aa16.65■□□□□ 0.26
SHMT2-225ENST00000556798 MUM1Q2TAK8 710 aa16.65■□□□□ 0.26
SHMT2-225ENST00000556798 CCDC153Q494R4 210 aa16.65■□□□□ 0.26
SHMT2-225ENST00000556798 BROXQ5VW32 411 aa16.65■□□□□ 0.26
SHMT2-225ENST00000556798 TMIGD1Q6UXZ0 262 aa16.65■□□□□ 0.26
SHMT2-225ENST00000556798 ZYG11AQ6WRX3 759 aa16.65■□□□□ 0.26
SHMT2-225ENST00000556798 ZNF517Q6ZMY9 492 aaPredicted RBP16.65■□□□□ 0.26
SHMT2-225ENST00000556798 KRT78Q8N1N4 520 aa16.65■□□□□ 0.26
SHMT2-225ENST00000556798 ARHGEF39Q8N4T4 335 aa16.65■□□□□ 0.26
SHMT2-225ENST00000556798 CAMKVQ8NCB2 501 aa16.65■□□□□ 0.26
SHMT2-225ENST00000556798 OR52B6Q8NGF0 335 aa16.65■□□□□ 0.26
SHMT2-225ENST00000556798 KIAA1143Q96AT1 154 aaPredicted RBP16.65■□□□□ 0.26
SHMT2-225ENST00000556798 CRELD1Q96HD1 420 aa16.65■□□□□ 0.26
SHMT2-225ENST00000556798 CDK15Q96Q40 435 aa16.65■□□□□ 0.26
SHMT2-225ENST00000556798 EFCAB11Q9BUY7 163 aa16.65■□□□□ 0.26
SHMT2-225ENST00000556798 IQCGQ9H095 443 aaKnown RBP16.65■□□□□ 0.26
SHMT2-225ENST00000556798 NOL11Q9H8H0 719 aaKnown RBP16.65■□□□□ 0.26
SHMT2-225ENST00000556798 ACTR8Q9H981 624 aa16.65■□□□□ 0.26
SHMT2-225ENST00000556798 CPNE5Q9HCH3 593 aa16.65■□□□□ 0.26
SHMT2-225ENST00000556798 ZBTB26Q9HCK0 441 aa16.65■□□□□ 0.26
SHMT2-225ENST00000556798 SEMA4BQ9NPR2 832 aaPredicted RBP16.65■□□□□ 0.26
SHMT2-225ENST00000556798 ZFP69BQ9UJL9 534 aa16.65■□□□□ 0.26
SHMT2-225ENST00000556798 SSUH2Q9Y2M2 353 aa16.65■□□□□ 0.26
SHMT2-225ENST00000556798 TERTO14746 1132 aaKnown RBP16.64■□□□□ 0.25
SHMT2-225ENST00000556798 EFSO43281 561 aa16.64■□□□□ 0.25
SHMT2-225ENST00000556798 KATNA1O75449 491 aa16.64■□□□□ 0.25
SHMT2-225ENST00000556798 H2AFXP16104 143 aaPredicted RBP16.64■□□□□ 0.25
SHMT2-225ENST00000556798 CDH13P55290 713 aa16.64■□□□□ 0.25
SHMT2-225ENST00000556798 RPS18P62269 152 aaKnown RBP16.64■□□□□ 0.25
SHMT2-225ENST00000556798 HERVK_113P63132 956 aa16.64■□□□□ 0.25
SHMT2-225ENST00000556798 DCDP81605 110 aaKnown RBP16.64■□□□□ 0.25
SHMT2-225ENST00000556798 TBCCQ15814 346 aa16.64■□□□□ 0.25
SHMT2-225ENST00000556798 NKAIN1Q4KMZ8 207 aa16.64■□□□□ 0.25
SHMT2-225ENST00000556798 PAGE2BQ5JRK9 111 aa16.64■□□□□ 0.25
SHMT2-225ENST00000556798 FAM69BQ5VUD6 431 aa16.64■□□□□ 0.25
SHMT2-225ENST00000556798 FAM219BQ5XKK7 198 aa16.64■□□□□ 0.25
SHMT2-225ENST00000556798 TMEM214Q6NUQ4 689 aaKnown RBP16.64■□□□□ 0.25
SHMT2-225ENST00000556798 METTL2BQ6P1Q9 378 aaKnown RBP16.64■□□□□ 0.25
SHMT2-225ENST00000556798 C19orf48Q6RUI8 117 aa16.64■□□□□ 0.25
SHMT2-225ENST00000556798 PRSS41Q7RTY9 318 aa16.64■□□□□ 0.25
SHMT2-225ENST00000556798 ARMC2Q8NEN0 867 aa16.64■□□□□ 0.25
SHMT2-225ENST00000556798 ZNF483Q8TF39 744 aaPredicted RBP16.64■□□□□ 0.25
SHMT2-225ENST00000556798 CCT6BQ92526 530 aa16.64■□□□□ 0.25
SHMT2-225ENST00000556798 ERVK-6Q9BXR3 956 aa16.64■□□□□ 0.25
SHMT2-225ENST00000556798 SLC22A11Q9NSA0 550 aa16.64■□□□□ 0.25
SHMT2-225ENST00000556798 ARGLU1Q9NWB6 273 aaPredicted RBP16.64■□□□□ 0.25
SHMT2-225ENST00000556798 SLC17A7Q9P2U7 560 aa16.64■□□□□ 0.25
SHMT2-225ENST00000556798 ZNF490Q9ULM2 529 aaPredicted RBP16.64■□□□□ 0.25
SHMT2-225ENST00000556798 PLLPQ9Y342 182 aa16.64■□□□□ 0.25
SHMT2-225ENST00000556798 NUP210LQ5VU65 1888 aa16.63■□□□□ 0.25
SHMT2-225ENST00000556798 A0A0A6YYC8 382 aaPredicted RBP16.63■□□□□ 0.25
SHMT2-225ENST00000556798 C9J4A7 227 aa16.63■□□□□ 0.25
SHMT2-225ENST00000556798 I3L1I5 382 aaPredicted RBP16.63■□□□□ 0.25
SHMT2-225ENST00000556798 SUPT7LO94864 414 aa16.63■□□□□ 0.25
SHMT2-225ENST00000556798 CAPN1P07384 714 aa16.63■□□□□ 0.25
SHMT2-225ENST00000556798 PCNAP12004 261 aa16.63■□□□□ 0.25
SHMT2-225ENST00000556798 IL1RNP18510 177 aa16.63■□□□□ 0.25
SHMT2-225ENST00000556798 HNF4AP41235 474 aa16.63■□□□□ 0.25
SHMT2-225ENST00000556798 CASP2P42575 452 aa16.63■□□□□ 0.25
SHMT2-225ENST00000556798 CCNG1P51959 295 aa16.63■□□□□ 0.25
SHMT2-225ENST00000556798 PRKAA2P54646 552 aa16.63■□□□□ 0.25
SHMT2-225ENST00000556798 EMP3P54852 163 aa16.63■□□□□ 0.25
SHMT2-225ENST00000556798 FOXL2P58012 376 aa16.63■□□□□ 0.25
SHMT2-225ENST00000556798 RGS1Q08116 209 aa16.63■□□□□ 0.25
SHMT2-225ENST00000556798 LAPTM5Q13571 262 aa16.63■□□□□ 0.25
SHMT2-225ENST00000556798 E2F2Q14209 437 aa16.63■□□□□ 0.25
SHMT2-225ENST00000556798 RBBP7Q16576 425 aa16.63■□□□□ 0.25
SHMT2-225ENST00000556798 NDUFA9Q16795 377 aa16.63■□□□□ 0.25
SHMT2-225ENST00000556798 UNC50Q53HI1 259 aa16.63■□□□□ 0.25
SHMT2-225ENST00000556798 ZNF678Q5SXM1 525 aa16.63■□□□□ 0.25
SHMT2-225ENST00000556798 ARHGAP40Q5TG30 622 aa16.63■□□□□ 0.25
SHMT2-225ENST00000556798 GARNL3Q5VVW2 1013 aa16.63■□□□□ 0.25
SHMT2-225ENST00000556798 MLIPQ5VWP3 458 aa16.63■□□□□ 0.25
SHMT2-225ENST00000556798 GRHL2Q6ISB3 625 aa16.63■□□□□ 0.25
SHMT2-225ENST00000556798 CCDC81Q6ZN84 652 aa16.63■□□□□ 0.25
SHMT2-225ENST00000556798 COX15Q7KZN9 410 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms