RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 BMFQ96LC9 184 aa17.59■□□□□ 0.41
SDR39U1-220ENST00000556548 HHIPQ96QV1 700 aa17.59■□□□□ 0.41
SDR39U1-220ENST00000556548 SLC29A1Q99808 456 aa17.59■□□□□ 0.41
SDR39U1-220ENST00000556548 CPPED1Q9BRF8 314 aaPredicted RBP17.59■□□□□ 0.41
SDR39U1-220ENST00000556548 KAT8Q9H7Z6 458 aaKnown RBP17.59■□□□□ 0.41
SDR39U1-220ENST00000556548 RMI1Q9H9A7 625 aa17.59■□□□□ 0.41
SDR39U1-220ENST00000556548 EBF1Q9UH73 591 aa17.59■□□□□ 0.41
SDR39U1-220ENST00000556548 ANAPC2Q9UJX6 822 aa17.59■□□□□ 0.41
SDR39U1-220ENST00000556548 EML2O95834 649 aa17.58■□□□□ 0.41
SDR39U1-220ENST00000556548 CPTPQ5TA50 214 aa17.58■□□□□ 0.41
SDR39U1-220ENST00000556548 IRGCQ6NXR0 463 aa17.58■□□□□ 0.41
SDR39U1-220ENST00000556548 ISLR2Q6UXK2 745 aa17.58■□□□□ 0.41
SDR39U1-220ENST00000556548 KRT78Q8N1N4 520 aa17.58■□□□□ 0.41
SDR39U1-220ENST00000556548 FRMD1Q8N878 549 aa17.58■□□□□ 0.41
SDR39U1-220ENST00000556548 ANKRD53Q8N9V6 530 aa17.58■□□□□ 0.41
SDR39U1-220ENST00000556548 ZNF548Q8NEK5 533 aaPredicted RBP17.58■□□□□ 0.41
SDR39U1-220ENST00000556548 RNF145Q96MT1 663 aa17.58■□□□□ 0.41
SDR39U1-220ENST00000556548 DUSP26Q9BV47 211 aa17.58■□□□□ 0.41
SDR39U1-220ENST00000556548 PNMA8BQ9ULN7 279 aaPredicted RBP17.58■□□□□ 0.41
SDR39U1-220ENST00000556548 MMP17Q9ULZ9 603 aa17.58■□□□□ 0.41
SDR39U1-220ENST00000556548 HNRNPRO43390 633 aaKnown RBP17.58■□□□□ 0.4
SDR39U1-220ENST00000556548 SCN2BO60939 215 aa17.58■□□□□ 0.4
SDR39U1-220ENST00000556548 GMNNO75496 209 aa17.58■□□□□ 0.4
SDR39U1-220ENST00000556548 DYNC1I2Q13409 638 aaKnown RBP17.58■□□□□ 0.4
SDR39U1-220ENST00000556548 FXNQ16595 210 aa17.58■□□□□ 0.4
SDR39U1-220ENST00000556548 DUOXA1Q1HG43 343 aa17.58■□□□□ 0.4
SDR39U1-220ENST00000556548 C6orf52Q5T4I8 152 aa17.58■□□□□ 0.4
SDR39U1-220ENST00000556548 CATSPER1Q8NEC5 780 aa17.58■□□□□ 0.4
SDR39U1-220ENST00000556548 TRPV3Q8NET8 790 aa17.58■□□□□ 0.4
SDR39U1-220ENST00000556548 FAM120BQ96EK7 910 aaKnown RBP17.58■□□□□ 0.4
SDR39U1-220ENST00000556548 SH3GL1Q99961 368 aa17.58■□□□□ 0.4
SDR39U1-220ENST00000556548 TBC1D29Q9UFV1 150 aa17.58■□□□□ 0.4
SDR39U1-220ENST00000556548 EXO1Q9UQ84 846 aaKnown RBP17.58■□□□□ 0.4
SDR39U1-220ENST00000556548 ELOVL7A1L3X0 281 aa17.57■□□□□ 0.4
SDR39U1-220ENST00000556548 PDLIM1O00151 329 aa17.57■□□□□ 0.4
SDR39U1-220ENST00000556548 RTCAO00442 366 aaKnown RBP17.57■□□□□ 0.4
SDR39U1-220ENST00000556548 STATHP02808 62 aa17.57■□□□□ 0.4
SDR39U1-220ENST00000556548 GPIP06744 558 aa17.57■□□□□ 0.4
SDR39U1-220ENST00000556548 ANXA6P08133 673 aa17.57■□□□□ 0.4
SDR39U1-220ENST00000556548 ZNF26P17031 533 aaPredicted RBP17.57■□□□□ 0.4
SDR39U1-220ENST00000556548 HOXB9P17482 250 aaPredicted RBP17.57■□□□□ 0.4
SDR39U1-220ENST00000556548 HSD17B2P37059 387 aa17.57■□□□□ 0.4
SDR39U1-220ENST00000556548 MED21Q13503 144 aa17.57■□□□□ 0.4
SDR39U1-220ENST00000556548 RPE65Q16518 533 aa17.57■□□□□ 0.4
SDR39U1-220ENST00000556548 UAP1L1Q3KQV9 507 aa17.57■□□□□ 0.4
SDR39U1-220ENST00000556548 ZNF551Q7Z340 670 aaPredicted RBP17.57■□□□□ 0.4
SDR39U1-220ENST00000556548 RBM12BQ8IXT5 1001 aaKnown RBP17.57■□□□□ 0.4
SDR39U1-220ENST00000556548 OR52E1Q8NGJ3 308 aa17.57■□□□□ 0.4
SDR39U1-220ENST00000556548 FBXO30Q8TB52 745 aa17.57■□□□□ 0.4
SDR39U1-220ENST00000556548 OR2M4Q96R27 311 aa17.57■□□□□ 0.4
SDR39U1-220ENST00000556548 PRO3102Q9H379 93 aa17.57■□□□□ 0.4
SDR39U1-220ENST00000556548 C2orf42Q9NWW7 574 aa17.57■□□□□ 0.4
SDR39U1-220ENST00000556548 ADGRE2Q9UHX3 823 aa17.57■□□□□ 0.4
SDR39U1-220ENST00000556548 NUP214P35658 2090 aaPredicted RBP17.57■□□□□ 0.4
SDR39U1-220ENST00000556548 ANKDD1BA6NHY2 528 aa17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 PRMT3O60678 531 aa17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 ABCB1P08183 1280 aaPredicted RBP17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 ZCCHC18P0CG32 403 aa17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 FASP25445 335 aa17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 ASMTP46597 345 aa17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 CCR8P51685 355 aa17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 PRKCQQ04759 706 aa17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 DPY19L1Q2PZI1 675 aa17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 ZNF385BQ569K4 471 aa17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 TMEM154Q6P9G4 183 aa17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 MMP21Q8N119 569 aa17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 FAM86B1Q8N7N1 296 aa17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 OR4K1Q8NGD4 311 aa17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 OR8J2Q8NGG1 315 aa17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 UBE2E3Q969T4 207 aa17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 NCLNQ969V3 563 aa17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 METTL2AQ96IZ6 378 aaKnown RBP17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 F2RL3Q96RI0 385 aa17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 AIF1LQ9BQI0 150 aa17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 UBE2ZQ9H832 354 aaPredicted RBP17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 SPATA7Q9P0W8 599 aa17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 KLHL18O94889 574 aa17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 TBX6O95947 436 aaPredicted RBP17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 CAPNS1P04632 268 aa17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 SERPIND1P05546 499 aa17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 HNRNPA2B1P22626 353 aaKnown RBP17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 HPCAL1P37235 193 aa17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 PIK3CBP42338 1070 aa17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 RAB28P51157 221 aa17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 TAS2R50P59544 299 aa17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 PHEXP78562 749 aa17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 ZNF763Q0D2J5 394 aa17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 FAM180BQ6P0A1 224 aa17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 RAB42Q8N4Z0 105 aa17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 FAM162AQ96A26 154 aa17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 AGPAT4Q9NRZ5 378 aa17.56■□□□□ 0.4
SDR39U1-220ENST00000556548 PRR19A6NJB7 356 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 LRRC72A6NJI9 287 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 CXCR6O00574 342 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 SOCS2O14508 198 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 OR1F1O43749 312 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 RASGRP1O95267 797 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 ENGP17813 658 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 POU3F3P20264 500 aaPredicted RBP17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 PTX3P26022 381 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms