RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 ITIH1P19827 911 aa16.63■□□□□ 0.25
TUBB3-211ENST00000556536 ETV5P41161 510 aa16.63■□□□□ 0.25
TUBB3-211ENST00000556536 NEK2P51955 445 aa16.63■□□□□ 0.25
TUBB3-211ENST00000556536 VSX2P58304 361 aaPredicted RBP16.63■□□□□ 0.25
TUBB3-211ENST00000556536 MC2RQ01718 297 aa16.63■□□□□ 0.25
TUBB3-211ENST00000556536 GUCY1A3Q02108 690 aa16.63■□□□□ 0.25
TUBB3-211ENST00000556536 ACY1Q03154 408 aa16.63■□□□□ 0.25
TUBB3-211ENST00000556536 FOXM1Q08050 763 aa16.63■□□□□ 0.25
TUBB3-211ENST00000556536 GALNT1Q10472 559 aaPredicted RBP16.63■□□□□ 0.25
TUBB3-211ENST00000556536 ATG16L1Q676U5 607 aa16.63■□□□□ 0.25
TUBB3-211ENST00000556536 CLEC6AQ6EIG7 209 aa16.63■□□□□ 0.25
TUBB3-211ENST00000556536 RNF175Q8N4F7 328 aa16.63■□□□□ 0.25
TUBB3-211ENST00000556536 TBC1D19Q8N5T2 526 aa16.63■□□□□ 0.25
TUBB3-211ENST00000556536 WDR20Q8TBZ3 569 aa16.63■□□□□ 0.25
TUBB3-211ENST00000556536 METTL6Q8TCB7 284 aa16.63■□□□□ 0.25
TUBB3-211ENST00000556536 AGR3Q8TD06 166 aa16.63■□□□□ 0.25
TUBB3-211ENST00000556536 LRRC8CQ8TDW0 803 aa16.63■□□□□ 0.25
TUBB3-211ENST00000556536 PMEPA1Q969W9 287 aa16.63■□□□□ 0.25
TUBB3-211ENST00000556536 MTFMTQ96DP5 389 aaKnown RBP16.63■□□□□ 0.25
TUBB3-211ENST00000556536 THAP11Q96EK4 314 aa16.63■□□□□ 0.25
TUBB3-211ENST00000556536 ZNF285Q96NJ3 590 aa16.63■□□□□ 0.25
TUBB3-211ENST00000556536 CTRCQ99895 268 aa16.63■□□□□ 0.25
TUBB3-211ENST00000556536 PITHD1Q9GZP4 211 aaPredicted RBP16.63■□□□□ 0.25
TUBB3-211ENST00000556536 APMAPQ9HDC9 416 aa16.63■□□□□ 0.25
TUBB3-211ENST00000556536 STARD5Q9NSY2 213 aa16.63■□□□□ 0.25
TUBB3-211ENST00000556536 ZDHHC2Q9UIJ5 367 aa16.63■□□□□ 0.25
TUBB3-211ENST00000556536 AP1M2Q9Y6Q5 423 aa16.63■□□□□ 0.25
TUBB3-211ENST00000556536 B4E171 279 aa16.62■□□□□ 0.25
TUBB3-211ENST00000556536 H3BMH7 237 aa16.62■□□□□ 0.25
TUBB3-211ENST00000556536 ENO1P06733 434 aaKnown RBP16.62■□□□□ 0.25
TUBB3-211ENST00000556536 SERPINB3P29508 390 aa16.62■□□□□ 0.25
TUBB3-211ENST00000556536 AHRP35869 848 aa16.62■□□□□ 0.25
TUBB3-211ENST00000556536 TSPAN7P41732 249 aa16.62■□□□□ 0.25
TUBB3-211ENST00000556536 HTR6P50406 440 aa16.62■□□□□ 0.25
TUBB3-211ENST00000556536 GYS2P54840 703 aa16.62■□□□□ 0.25
TUBB3-211ENST00000556536 SGO1Q5FBB7 561 aa16.62■□□□□ 0.25
TUBB3-211ENST00000556536 SH2D4BQ5SQS7 431 aa16.62■□□□□ 0.25
TUBB3-211ENST00000556536 TTC19Q6DKK2 380 aaPredicted RBP16.62■□□□□ 0.25
TUBB3-211ENST00000556536 FOXR1Q6PIV2 292 aa16.62■□□□□ 0.25
TUBB3-211ENST00000556536 ZNF781Q8N8C0 355 aa16.62■□□□□ 0.25
TUBB3-211ENST00000556536 CREB3L4Q8TEY5 395 aa16.62■□□□□ 0.25
TUBB3-211ENST00000556536 N4BP2L2Q92802 583 aaPredicted RBP16.62■□□□□ 0.25
TUBB3-211ENST00000556536 UBE2E3Q969T4 207 aa16.62■□□□□ 0.25
TUBB3-211ENST00000556536 RERGQ96A58 199 aaPredicted RBP16.62■□□□□ 0.25
TUBB3-211ENST00000556536 TM4SF19Q96DZ7 209 aa16.62■□□□□ 0.25
TUBB3-211ENST00000556536 RNF31Q96EP0 1072 aa16.62■□□□□ 0.25
TUBB3-211ENST00000556536 MAGEB10Q96LZ2 347 aaPredicted RBP16.62■□□□□ 0.25
TUBB3-211ENST00000556536 MAGEB18Q96M61 343 aa16.62■□□□□ 0.25
TUBB3-211ENST00000556536 SLC29A3Q9BZD2 475 aa16.62■□□□□ 0.25
TUBB3-211ENST00000556536 RHBGQ9H310 441 aa16.62■□□□□ 0.25
TUBB3-211ENST00000556536 FARSBQ9NSD9 589 aaKnown RBP16.62■□□□□ 0.25
TUBB3-211ENST00000556536 THAP1Q9NVV9 213 aa16.62■□□□□ 0.25
TUBB3-211ENST00000556536 PISDQ9UG56 409 aa16.62■□□□□ 0.25
TUBB3-211ENST00000556536 ZFP69BQ9UJL9 534 aa16.62■□□□□ 0.25
TUBB3-211ENST00000556536 SATB2Q9UPW6 733 aa16.62■□□□□ 0.25
TUBB3-211ENST00000556536 MSRB2Q9Y3D2 182 aa16.62■□□□□ 0.25
TUBB3-211ENST00000556536 FIS1Q9Y3D6 152 aa16.62■□□□□ 0.25
TUBB3-211ENST00000556536 PCDHGA11Q9Y5H2 935 aa16.62■□□□□ 0.25
TUBB3-211ENST00000556536 MANBAO00462 879 aa16.61■□□□□ 0.25
TUBB3-211ENST00000556536 PLD2O14939 933 aa16.61■□□□□ 0.25
TUBB3-211ENST00000556536 AZIN1O14977 448 aa16.61■□□□□ 0.25
TUBB3-211ENST00000556536 SRPX2O60687 465 aaPredicted RBP16.61■□□□□ 0.25
TUBB3-211ENST00000556536 TBX6O95947 436 aaPredicted RBP16.61■□□□□ 0.25
TUBB3-211ENST00000556536 SERPIND1P05546 499 aa16.61■□□□□ 0.25
TUBB3-211ENST00000556536 HMOX2P30519 316 aa16.61■□□□□ 0.25
TUBB3-211ENST00000556536 MDH1P40925 334 aaKnown RBP16.61■□□□□ 0.25
TUBB3-211ENST00000556536 SNRPNP63162 240 aaKnown RBP16.61■□□□□ 0.25
TUBB3-211ENST00000556536 OCRLQ01968 901 aa16.61■□□□□ 0.25
TUBB3-211ENST00000556536 EIF3IQ13347 325 aaKnown RBP16.61■□□□□ 0.25
TUBB3-211ENST00000556536 DDX39BQ13838 428 aaKnown RBP16.61■□□□□ 0.25
TUBB3-211ENST00000556536 HKDC1Q2TB90 917 aa16.61■□□□□ 0.25
TUBB3-211ENST00000556536 C3orf38Q5JPI3 329 aa16.61■□□□□ 0.25
TUBB3-211ENST00000556536 WASHC2DQ5SRD0 308 aa16.61■□□□□ 0.25
TUBB3-211ENST00000556536 PRAMEF17Q5VTA0 474 aa16.61■□□□□ 0.25
TUBB3-211ENST00000556536 KANK2Q63ZY3 851 aa16.61■□□□□ 0.25
TUBB3-211ENST00000556536 FRG2Q64ET8 278 aa16.61■□□□□ 0.25
TUBB3-211ENST00000556536 ASPGQ86U10 573 aa16.61■□□□□ 0.25
TUBB3-211ENST00000556536 CSNK1A1LQ8N752 337 aa16.61■□□□□ 0.25
TUBB3-211ENST00000556536 HUS1BQ8NHY5 278 aa16.61■□□□□ 0.25
TUBB3-211ENST00000556536 WDR36Q8NI36 951 aaKnown RBP16.61■□□□□ 0.25
TUBB3-211ENST00000556536 ZNF473Q8WTR7 871 aaKnown RBP16.61■□□□□ 0.25
TUBB3-211ENST00000556536 SLC13A3Q8WWT9 602 aa16.61■□□□□ 0.25
TUBB3-211ENST00000556536 FRG2BQ96QU4 278 aa16.61■□□□□ 0.25
TUBB3-211ENST00000556536 MTERF1Q99551 399 aaKnown RBP16.61■□□□□ 0.25
TUBB3-211ENST00000556536 FANCEQ9HB96 536 aa16.61■□□□□ 0.25
TUBB3-211ENST00000556536 SLCO1B3Q9NPD5 702 aa16.61■□□□□ 0.25
TUBB3-211ENST00000556536 FBXO8Q9NRD0 319 aa16.61■□□□□ 0.25
TUBB3-211ENST00000556536 PNPOQ9NVS9 261 aa16.61■□□□□ 0.25
TUBB3-211ENST00000556536 SLC39A1Q9NY26 324 aa16.61■□□□□ 0.25
TUBB3-211ENST00000556536 TRAF6Q9Y4K3 522 aa16.61■□□□□ 0.25
TUBB3-211ENST00000556536 SNRNP200O75643 2136 aaKnown RBP16.6■□□□□ 0.25
TUBB3-211ENST00000556536 ANKDD1BA6NHY2 528 aa16.6■□□□□ 0.25
TUBB3-211ENST00000556536 POLR1CO15160 346 aaPredicted RBP16.6■□□□□ 0.25
TUBB3-211ENST00000556536 NDUFS4O43181 175 aa16.6■□□□□ 0.25
TUBB3-211ENST00000556536 CRCPO75575 148 aa16.6■□□□□ 0.25
TUBB3-211ENST00000556536 OR2B3O76000 313 aa16.6■□□□□ 0.25
TUBB3-211ENST00000556536 TIAF1O95411 115 aa16.6■□□□□ 0.25
TUBB3-211ENST00000556536 PDYNP01213 254 aa16.6■□□□□ 0.25
TUBB3-211ENST00000556536 FGF4P08620 206 aa16.6■□□□□ 0.25
TUBB3-211ENST00000556536 JMJD7P0C870 316 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms