RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 ACSL3O95573 720 aa5□□□□□ -1.61
SRP54-211ENST00000556445 CD48P09326 243 aa5□□□□□ -1.61
SRP54-211ENST00000556445 ATXN1LP0C7T5 689 aaKnown RBP5□□□□□ -1.61
SRP54-211ENST00000556445 MLNP12872 115 aa5□□□□□ -1.61
SRP54-211ENST00000556445 SRCP12931 536 aa5□□□□□ -1.61
SRP54-211ENST00000556445 ACP5P13686 325 aa5□□□□□ -1.61
SRP54-211ENST00000556445 CHN1P15882 459 aa5□□□□□ -1.61
SRP54-211ENST00000556445 TPSB2P20231 275 aa5□□□□□ -1.61
SRP54-211ENST00000556445 CCR1P32246 355 aa5□□□□□ -1.61
SRP54-211ENST00000556445 STX2P32856 288 aa5□□□□□ -1.61
SRP54-211ENST00000556445 MC5RP33032 325 aa5□□□□□ -1.61
SRP54-211ENST00000556445 RFC2P35250 354 aa5□□□□□ -1.61
SRP54-211ENST00000556445 SOX6P35712 828 aa5□□□□□ -1.61
SRP54-211ENST00000556445 SKIV2L2P42285 1042 aaKnown RBP5□□□□□ -1.61
SRP54-211ENST00000556445 MMP13P45452 471 aa5□□□□□ -1.61
SRP54-211ENST00000556445 BRCC3P46736 316 aa5□□□□□ -1.61
SRP54-211ENST00000556445 GLUD2P49448 558 aa5□□□□□ -1.61
SRP54-211ENST00000556445 CXCR3P49682 368 aa5□□□□□ -1.61
SRP54-211ENST00000556445 KHKP50053 298 aa5□□□□□ -1.61
SRP54-211ENST00000556445 CAPZA1P52907 286 aa5□□□□□ -1.61
SRP54-211ENST00000556445 MFAP4P55083 255 aa5□□□□□ -1.61
SRP54-211ENST00000556445 LOXL3P58215 753 aa5□□□□□ -1.61
SRP54-211ENST00000556445 KIAA1024LP59773 190 aa5□□□□□ -1.61
SRP54-211ENST00000556445 TPI1P60174 286 aa5□□□□□ -1.61
SRP54-211ENST00000556445 MAGOHP61326 146 aaKnown RBP5□□□□□ -1.61
SRP54-211ENST00000556445 RPL10AP62906 217 aaKnown RBP5□□□□□ -1.61
SRP54-211ENST00000556445 ELP6Q0PNE2 266 aa5□□□□□ -1.61
SRP54-211ENST00000556445 PDIA2Q13087 525 aaKnown RBP5□□□□□ -1.61
SRP54-211ENST00000556445 RIPK1Q13546 671 aa5□□□□□ -1.61
SRP54-211ENST00000556445 IL11RAQ14626 422 aa5□□□□□ -1.61
SRP54-211ENST00000556445 KCNJ11Q14654 390 aa5□□□□□ -1.61
SRP54-211ENST00000556445 TPSAB1Q15661 275 aa5□□□□□ -1.61
SRP54-211ENST00000556445 ZSCAN26Q16670 478 aa5□□□□□ -1.61
SRP54-211ENST00000556445 PLA1AQ53H76 456 aa5□□□□□ -1.61
SRP54-211ENST00000556445 TNFAIP8L3Q5GJ75 292 aa5□□□□□ -1.61
SRP54-211ENST00000556445 UBAP2Q5T6F2 1119 aaKnown RBP5□□□□□ -1.61
SRP54-211ENST00000556445 LGSNQ5TDP6 509 aa5□□□□□ -1.61
SRP54-211ENST00000556445 SHEQ5VZ18 495 aa5□□□□□ -1.61
SRP54-211ENST00000556445 BSPRYQ5W0U4 402 aa5□□□□□ -1.61
SRP54-211ENST00000556445 KIAA0930Q6ICG6 404 aaPredicted RBP5□□□□□ -1.61
SRP54-211ENST00000556445 HEPHL1Q6MZM0 1159 aa5□□□□□ -1.61
SRP54-211ENST00000556445 HMBOX1Q6NT76 420 aa5□□□□□ -1.61
SRP54-211ENST00000556445 MSANTD2Q6P1R3 559 aa5□□□□□ -1.61
SRP54-211ENST00000556445 ZNF788Q6ZQV5 615 aa5□□□□□ -1.61
SRP54-211ENST00000556445 MAVSQ7Z434 540 aa5□□□□□ -1.61
SRP54-211ENST00000556445 SPATA19Q7Z5L4 167 aa5□□□□□ -1.61
SRP54-211ENST00000556445 AMIGO2Q86SJ2 522 aa5□□□□□ -1.61
SRP54-211ENST00000556445 DTX2Q86UW9 622 aa5□□□□□ -1.61
SRP54-211ENST00000556445 FAM131BQ86XD5 332 aa5□□□□□ -1.61
SRP54-211ENST00000556445 CEP57Q86XR8 500 aa5□□□□□ -1.61
SRP54-211ENST00000556445 ZBED8Q8IZ13 594 aa5□□□□□ -1.61
SRP54-211ENST00000556445 PQLC3Q8N755 202 aa5□□□□□ -1.61
SRP54-211ENST00000556445 KDM1BQ8NB78 822 aa5□□□□□ -1.61
SRP54-211ENST00000556445 CLEC4CQ8WTT0 213 aa5□□□□□ -1.61
SRP54-211ENST00000556445 KLHL29Q96CT2 875 aa5□□□□□ -1.61
SRP54-211ENST00000556445 MRPL38Q96DV4 380 aaKnown RBP5□□□□□ -1.61
SRP54-211ENST00000556445 DTNBP1Q96EV8 351 aa5□□□□□ -1.61
SRP54-211ENST00000556445 PRR11Q96HE9 360 aaPredicted RBP5□□□□□ -1.61
SRP54-211ENST00000556445 SERPINB11Q96P15 392 aa5□□□□□ -1.61
SRP54-211ENST00000556445 RBM14Q96PK6 669 aaKnown RBP5□□□□□ -1.61
SRP54-211ENST00000556445 GAL3ST4Q96RP7 486 aa5□□□□□ -1.61
SRP54-211ENST00000556445 HAPLN3Q96S86 360 aa5□□□□□ -1.61
SRP54-211ENST00000556445 CYTH2Q99418 400 aa5□□□□□ -1.61
SRP54-211ENST00000556445 PKMYT1Q99640 499 aa5□□□□□ -1.61
SRP54-211ENST00000556445 MESP1Q9BRJ9 268 aa5□□□□□ -1.61
SRP54-211ENST00000556445 NAT9Q9BTE0 207 aa5□□□□□ -1.61
SRP54-211ENST00000556445 TBCDQ9BTW9 1192 aa5□□□□□ -1.61
SRP54-211ENST00000556445 CACNG6Q9BXT2 260 aa5□□□□□ -1.61
SRP54-211ENST00000556445 NSRP1Q9H0G5 558 aaKnown RBP5□□□□□ -1.61
SRP54-211ENST00000556445 CATSPERBQ9H7T0 1116 aa5□□□□□ -1.61
SRP54-211ENST00000556445 USP29Q9HBJ7 922 aa5□□□□□ -1.61
SRP54-211ENST00000556445 TLR8Q9NR97 1041 aaKnown RBP5□□□□□ -1.61
SRP54-211ENST00000556445 SERTAD4Q9NUC0 356 aa5□□□□□ -1.61
SRP54-211ENST00000556445 INTS9Q9NV88 658 aaKnown RBP5□□□□□ -1.61
SRP54-211ENST00000556445 TBC1D13Q9NVG8 400 aa5□□□□□ -1.61
SRP54-211ENST00000556445 DDIT4Q9NX09 232 aa5□□□□□ -1.61
SRP54-211ENST00000556445 MTMR10Q9NXD2 777 aa5□□□□□ -1.61
SRP54-211ENST00000556445 FBXL17Q9UF56 701 aa5□□□□□ -1.61
SRP54-211ENST00000556445 CD207Q9UJ71 328 aa5□□□□□ -1.61
SRP54-211ENST00000556445 GGA2Q9UJY4 613 aa5□□□□□ -1.61
SRP54-211ENST00000556445 CDH7Q9ULB5 785 aa5□□□□□ -1.61
SRP54-211ENST00000556445 SSX2IPQ9Y2D8 614 aa5□□□□□ -1.61
SRP54-211ENST00000556445 HEY1Q9Y5J3 304 aa5□□□□□ -1.61
SRP54-211ENST00000556445 TSC2P49815 1807 aa5□□□□□ -1.61
SRP54-211ENST00000556445 PTPRDP23468 1912 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 IQANK1A0A1B0GTG1 560 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 GMNCA6NCL1 334 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 YJEFN3A6XGL0 299 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 E7ENQ6 273 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 EBAG9O00559 213 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 NDUFAB1O14561 156 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 ANGPT2O15123 496 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 HCRTO43612 131 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 PAGE4O60829 102 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 FAM107AO95990 144 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 PENKP01210 267 aaPredicted RBP4.99□□□□□ -1.61
SRP54-211ENST00000556445 CXCL10P02778 98 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 SHBGP04278 402 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 PRG2P13727 222 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 GOT1P17174 413 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms