RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 OAS3Q9Y6K5 1087 aaKnown RBP4.94□□□□□ -1.62
TMEM260-210ENST00000556422 SERTM2A0A1B0GWG4 89 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 BLACEA4D250 179 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 A6NLC8 198 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 H3BNX3 289 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 GTPBP1O00178 669 aaKnown RBP4.93□□□□□ -1.62
TMEM260-210ENST00000556422 AIM2O14862 343 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 AREL1O15033 823 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 TGM5O43548 720 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 JRKO75564 520 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 CDK14O94921 469 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 LATS1O95835 1130 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 LRG1P02750 347 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 RPS17P08708 135 aaKnown RBP4.93□□□□□ -1.62
TMEM260-210ENST00000556422 CNPP09543 421 aaKnown RBP4.93□□□□□ -1.62
TMEM260-210ENST00000556422 ALDOCP09972 364 aaKnown RBP4.93□□□□□ -1.62
TMEM260-210ENST00000556422 GBX2P52951 348 aaPredicted RBP4.93□□□□□ -1.62
TMEM260-210ENST00000556422 PSMD4P55036 377 aaKnown RBP4.93□□□□□ -1.62
TMEM260-210ENST00000556422 HTRA4P83105 476 aaPredicted RBP4.93□□□□□ -1.62
TMEM260-210ENST00000556422 TUSC1Q2TAM9 212 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 GPAT3Q53EU6 434 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 KLHL26Q53HC5 615 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 PIGGQ5H8A4 983 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 SPOUT1Q5T280 376 aaKnown RBP4.93□□□□□ -1.62
TMEM260-210ENST00000556422 MPP7Q5T2T1 576 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 UBE2UQ5VVX9 321 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 FBXO46Q6PJ61 603 aaPredicted RBP4.93□□□□□ -1.62
TMEM260-210ENST00000556422 C5orf46Q6UWT4 87 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 PHYKPLQ8IUZ5 450 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 Q8N9G6 341 aaPredicted RBP4.93□□□□□ -1.62
TMEM260-210ENST00000556422 PHOSPHO2Q8TCD6 241 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 CCDC74BQ96LY2 380 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 CHID1Q9BWS9 393 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 HOXD1Q9GZZ0 328 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 CLPBQ9H078 707 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 ZBP1Q9H171 429 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 OPN3Q9H1Y3 402 aaPredicted RBP4.93□□□□□ -1.62
TMEM260-210ENST00000556422 SLC6A15Q9H2J7 730 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 TUBB1Q9H4B7 451 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 BPIFA1Q9NP55 256 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 NUDT15Q9NV35 164 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 TOR4AQ9NXH8 423 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 ZNF225Q9UK10 706 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 ASB1Q9Y576 335 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 A0A0U1RQK1 487 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 ATP6AP2A0A1C7CYW4 349 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 UBA6A0AVT1 1052 aaPredicted RBP4.93□□□□□ -1.62
TMEM260-210ENST00000556422 ZNF320A2RRD8 509 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 LCHNA4D1U4 455 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 EVPLLA8MZ36 301 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 CFAP99D6REC4 459 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 PLK4O00444 970 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 NDUFA2O43678 99 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 ATP6AP2O75787 350 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 SUPT7LO94864 414 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 SNAPINO95295 136 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 ALPIP09923 528 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 THRAP10827 490 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 BMP2P12643 396 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 ITIH1P19827 911 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 RAB4AP20338 218 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 LPOP22079 712 aaPredicted RBP4.93□□□□□ -1.62
TMEM260-210ENST00000556422 FMO4P31512 558 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 MC4RP32245 332 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 PIK3CGP48736 1102 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 MAPK10P53779 464 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 NUP107P57740 925 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 CEACAM7Q14002 265 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 GPR176Q14439 515 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 SMCO1Q147U7 214 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 LRRC26Q2I0M4 334 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 ARMCX4Q5H9R4 360 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 PRR23BQ6ZRT6 265 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 GK5Q6ZS86 529 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 ASPGQ86U10 573 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 KBTBD6Q86V97 674 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 PLCZ1Q86YW0 608 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 HERC6Q8IVU3 1022 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 PTGR2Q8N8N7 351 aaPredicted RBP4.93□□□□□ -1.62
TMEM260-210ENST00000556422 DCAF4L2Q8NA75 395 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 OR5H6Q8NGV6 325 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 OR6K2Q8NGY2 324 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 CD200R1Q8TD46 325 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 PIH1D2Q8WWB5 315 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 PIGKQ92643 395 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 TCEAL3Q969E4 200 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 KIAA1191Q96A73 305 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 FUBP1Q96AE4 644 aaKnown RBP4.93□□□□□ -1.62
TMEM260-210ENST00000556422 ZNF486Q96H40 463 aaPredicted RBP4.93□□□□□ -1.62
TMEM260-210ENST00000556422 BBS4Q96RK4 519 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 KCNA7Q96RP8 456 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 GPR21Q99679 349 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 TRMOQ9BU70 441 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 DERL2Q9GZP9 239 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 PIGUQ9H490 435 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 PDE7BQ9NP56 450 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 TMEM39AQ9NV64 488 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 SPG21Q9NZD8 308 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 IL17CQ9P0M4 197 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 INTS6Q9UL03 887 aaKnown RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms