RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 FARSAQ9Y285 508 aaKnown RBP9.2□□□□□ -0.94
SRP54-210ENST00000556380 MRPS18BQ9Y676 258 aaKnown RBP9.2□□□□□ -0.94
SRP54-210ENST00000556380 KCNE2Q9Y6J6 123 aa9.2□□□□□ -0.94
SRP54-210ENST00000556380 A0A1B0GX78 115 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 TRBC2A0A5B9 178 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 FEZF1A0PJY2 475 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 FOXS1O43638 330 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 CNOT3O75175 753 aaKnown RBP9.19□□□□□ -0.94
SRP54-210ENST00000556380 KLF7O75840 302 aaPredicted RBP9.19□□□□□ -0.94
SRP54-210ENST00000556380 WDR47O94967 919 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 EIF2S1P05198 315 aaKnown RBP9.19□□□□□ -0.94
SRP54-210ENST00000556380 RBP1P09455 135 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 FURINP09958 794 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 NUDT17P0C025 328 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 GNAZP19086 355 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 CASP2P42575 452 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 SCTRP47872 440 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 HSPA7P48741 367 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 AGTR2P50052 363 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 CYP4F2P78329 520 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 DCDP81605 110 aaKnown RBP9.19□□□□□ -0.94
SRP54-210ENST00000556380 REEP5Q00765 189 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 CDC16Q13042 620 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 E2F2Q14209 437 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 NCF4Q15080 339 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 GARNL3Q5VVW2 1013 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 TTLL10Q6ZVT0 673 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 COX15Q7KZN9 410 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 ADCK2Q7Z695 626 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 TMEM151BQ8IW70 566 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 TTC29Q8NA56 475 aaPredicted RBP9.19□□□□□ -0.94
SRP54-210ENST00000556380 UBLCP1Q8WVY7 318 aaPredicted RBP9.19□□□□□ -0.94
SRP54-210ENST00000556380 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.19□□□□□ -0.94
SRP54-210ENST00000556380 STARD8Q92502 1023 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 WDR34Q96EX3 536 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 TSNARE1Q96NA8 513 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 CCDC77Q9BR77 488 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 ACTL8Q9H568 366 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 CNOT10Q9H9A5 744 aaKnown RBP9.19□□□□□ -0.94
SRP54-210ENST00000556380 DNAJC11Q9NVH1 559 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 IRAK4Q9NWZ3 460 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 WWOXQ9NZC7 414 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 GPRC5BQ9NZH0 403 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 COPG2Q9UBF2 871 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 MRPS2Q9Y399 296 aaKnown RBP9.19□□□□□ -0.94
SRP54-210ENST00000556380 DYRK1BQ9Y463 629 aa9.19□□□□□ -0.94
SRP54-210ENST00000556380 IQANK1A0A1B0GTG1 560 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 A0A1W2PPM1 405 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 VSTM2BA6NLU5 285 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 SYCE1LA8MT33 242 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 ZNF891A8MT65 544 aaPredicted RBP9.18□□□□□ -0.94
SRP54-210ENST00000556380 FOXO6A8MYZ6 492 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 TXNDC9O14530 226 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 KATNA1O75449 491 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 CREG1O75629 220 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 ALBP02768 609 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 TUBBP07437 444 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 C1GALT1C1LP0DN25 315 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 AGXTP21549 392 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 ALAS2P22557 587 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 AHRP35869 848 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 OR1D4P47884 311 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 RPS18P62269 152 aaKnown RBP9.18□□□□□ -0.94
SRP54-210ENST00000556380 MEF2AQ02078 507 aaPredicted RBP9.18□□□□□ -0.94
SRP54-210ENST00000556380 FAM53BQ14153 422 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 MDC1Q14676 2089 aaKnown RBP9.18□□□□□ -0.94
SRP54-210ENST00000556380 SETDB1Q15047 1291 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 PCBP2Q15366 365 aaKnown RBP eCLIP9.18□□□□□ -0.94
SRP54-210ENST00000556380 PFKFB4Q16877 469 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 TSNAXIP1Q2TAA8 658 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 MUM1Q2TAK8 710 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 FAM69BQ5VUD6 431 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 ATG9BQ674R7 924 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 TMEM214Q6NUQ4 689 aaKnown RBP9.18□□□□□ -0.94
SRP54-210ENST00000556380 KLC3Q6P597 504 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 PCSK4Q6UW60 755 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 OVCH1Q7RTY7 1134 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 LRRC70Q7Z2Q7 622 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 AFAP1L2Q8N4X5 818 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 MREGQ8N565 214 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 ENDOVQ8N8Q3 282 aaKnown RBP9.18□□□□□ -0.94
SRP54-210ENST00000556380 ANKRD53Q8N9V6 530 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 OR2W6PQ8NHA6 318 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 ACMSDQ8TDX5 336 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 CREB3L4Q8TEY5 395 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 TTC9Q92623 222 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 EXT2Q93063 718 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 RERGQ96A58 199 aaPredicted RBP9.18□□□□□ -0.94
SRP54-210ENST00000556380 MOCOSQ96EN8 888 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 CABS1Q96KC9 395 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 MACROD1Q9BQ69 325 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 MRPL57Q9BQC6 102 aaKnown RBP9.18□□□□□ -0.94
SRP54-210ENST00000556380 CAPS2Q9BXY5 557 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 SLC7A5P2Q9GIP4 190 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 SLC26A1Q9H2B4 701 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 EHD1Q9H4M9 534 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 NT5DC2Q9H857 520 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 ZNF395Q9H8N7 513 aaPredicted RBP9.18□□□□□ -0.94
SRP54-210ENST00000556380 PPCSQ9HAB8 311 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 TXLNGQ9NUQ3 528 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms