RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 RASGRF2O14827 1237 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 BUD23O43709 281 aaKnown RBP6.47□□□□□ -1.37
ATXN3-236ENST00000556220 SRPX2O60687 465 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-236ENST00000556220 EPOP01588 193 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 TPBGLP0DKB5 382 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 RALBP11234 206 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 IMPDH2P12268 514 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 GZMAP12544 262 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 ATP1B2P14415 290 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-236ENST00000556220 FERP16591 822 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 MAGP20916 626 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 EEF1DP29692 281 aaKnown RBP6.47□□□□□ -1.37
ATXN3-236ENST00000556220 PEBP1P30086 187 aaKnown RBP6.47□□□□□ -1.37
ATXN3-236ENST00000556220 PTGS2P35354 604 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 GRIA3P42263 894 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 DLX5P56178 289 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 CCZ1BP86790 482 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 CCZ1P86791 482 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-236ENST00000556220 TUBA3CQ13748 450 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 NOMO1Q15155 1222 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 KRT31Q15323 416 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 OR1C1Q15619 314 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 DEFB113Q30KQ7 82 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 ACER2Q5QJU3 275 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 WASHC2DQ5SRD0 308 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 ZNF449Q6P9G9 518 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 TUBA3EQ6PEY2 450 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 ARHGEF18Q6ZSZ5 1173 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 GLT6D1Q7Z4J2 308 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-236ENST00000556220 CDC20BQ86Y33 519 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 CCDC71Q8IV32 467 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-236ENST00000556220 IGDCC3Q8IVU1 814 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 ZZZ3Q8IYH5 903 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 BEST3Q8N1M1 668 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 CPSF7Q8N684 471 aaKnown RBP6.47□□□□□ -1.37
ATXN3-236ENST00000556220 AMER2Q8N7J2 671 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 NIPA2Q8N8Q9 360 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 TMEM178AQ8NBL3 297 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 KCTD6Q8NC69 237 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 TMEM52Q8NDY8 209 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 NUP43Q8NFH3 380 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 MYRIPQ8NFW9 859 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 NEK11Q8NG66 645 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 OR5AR1Q8NGP9 310 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 GOT1L1Q8NHS2 421 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-236ENST00000556220 FAM57AQ8TBR7 257 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 BLOC1S5Q8TDH9 187 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 FAF2Q96CS3 445 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 MRRFQ96E11 262 aaKnown RBP6.47□□□□□ -1.37
ATXN3-236ENST00000556220 EAF1Q96JC9 268 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-236ENST00000556220 ZNF354BQ96LW1 612 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 SIGLEC12Q96PQ1 595 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 SELENOSQ9BQE4 189 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 UTP23Q9BRU9 249 aaKnown RBP6.47□□□□□ -1.37
ATXN3-236ENST00000556220 ZNF670Q9BS34 389 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 TUBB6Q9BUF5 446 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 ZNF700Q9H0M5 742 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 THAP2Q9H0W7 228 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 ASB8Q9H765 288 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 GLOD4Q9HC38 313 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 LUC7LQ9NQ29 371 aaKnown RBP6.47□□□□□ -1.37
ATXN3-236ENST00000556220 AP5S1Q9NUS5 200 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 MYO1AQ9UBC5 1043 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 POLG2Q9UHN1 485 aa6.47□□□□□ -1.37
ATXN3-236ENST00000556220 MXRA5Q9NR99 2828 aa6.46□□□□□ -1.37
ATXN3-236ENST00000556220 A0A1B0GTH9 108 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 HYKKA2RU49 373 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 USP27XA6NNY8 438 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 AGAP14A8MT82 685 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 STX7O15400 261 aaKnown RBP6.46□□□□□ -1.38
ATXN3-236ENST00000556220 SRP72O76094 671 aaKnown RBP6.46□□□□□ -1.38
ATXN3-236ENST00000556220 RAF1P04049 648 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 TPOP07202 933 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 HEXBP07686 556 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 SP1P08047 785 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 MYBL1P10243 752 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 ZNF24P17028 368 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 CDK11BP21127 795 aaKnown RBP6.46□□□□□ -1.38
ATXN3-236ENST00000556220 ACADLP28330 430 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 PTGER1P34995 402 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 HCFC1P51610 2035 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 WNT3AP56704 352 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 MYL5Q02045 173 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 AP1B1Q10567 949 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 PMPCAQ10713 525 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 KEAP1Q14145 624 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 PTPRCAPQ14761 206 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 NR1I3Q14994 352 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 PDK2Q15119 407 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 MEP1AQ16819 746 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 HADHQ16836 314 aaKnown RBP6.46□□□□□ -1.38
ATXN3-236ENST00000556220 TEX44Q53QW1 395 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 ANKRD39Q53RE8 183 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 SIRPB2Q5JXA9 342 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 NUP210LQ5VU65 1888 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 HLA-DQA1Q5Y7H0 255 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 SLC25A25Q6KCM7 469 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 H3F3CQ6NXT2 135 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 FIGLAQ6QHK4 219 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms