RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 ZNF648Q5T619 568 aaPredicted RBP6.6□□□□□ -1.35
SLIRP-204ENST00000555890 PIP5KL1Q5T9C9 394 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 TMEM198Q66K66 360 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 PMS2CLQ68D20 193 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 NAIF1Q69YI7 327 aaPredicted RBP6.6□□□□□ -1.35
SLIRP-204ENST00000555890 LHFPL2Q6ZUX7 228 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 LRRC70Q7Z2Q7 622 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 MAMDC2Q7Z304 686 aaPredicted RBP6.6□□□□□ -1.35
SLIRP-204ENST00000555890 NET1Q7Z628 596 aaPredicted RBP6.6□□□□□ -1.35
SLIRP-204ENST00000555890 FGD2Q7Z6J4 655 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 RALGPS2Q86X27 583 aaPredicted RBP6.6□□□□□ -1.35
SLIRP-204ENST00000555890 SFTPA1Q8IWL2 248 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 MIER2Q8N344 545 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 ARHGEF39Q8N4T4 335 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 CDYL2Q8N8U2 506 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 EXD3Q8N9H8 876 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 SNX31Q8N9S9 440 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 OR4F6Q8NGB9 312 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 OR2T3Q8NH03 318 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 ZNF417Q8TAU3 575 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 MAGEC3Q8TD91 643 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 GANCQ8TET4 914 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 SSC4DQ8WTU2 575 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 SNRNP27Q8WVK2 155 aaKnown RBP6.6□□□□□ -1.35
SLIRP-204ENST00000555890 USP7Q93009 1102 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 STMN2Q93045 179 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 ESAMQ96AP7 390 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 MSANTD3Q96H12 275 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 MARK4Q96L34 752 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 KCNA7Q96RP8 456 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 ZNF587Q96SQ5 575 aaPredicted RBP6.6□□□□□ -1.35
SLIRP-204ENST00000555890 SLC25A23Q9BV35 468 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 NTMT1Q9BV86 223 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 C1QTNF7Q9BXJ2 289 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 SLC29A3Q9BZD2 475 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 GP6Q9HCN6 339 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 MRPL40Q9NQ50 206 aaKnown RBP6.6□□□□□ -1.35
SLIRP-204ENST00000555890 TMEM74BQ9NUR3 256 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 TRPS1Q9UHF7 1281 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 BCAP29Q9UHQ4 241 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 GPR34Q9UPC5 381 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 PDE10AQ9Y233 779 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 BTRCQ9Y297 605 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 COQ6Q9Y2Z9 468 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 SPEF1Q9Y4P9 236 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 TIMM22Q9Y584 194 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 TRPM6Q9BX84 2022 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 PCDH15Q96QU1 1955 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 SLC5A10A0PJK1 596 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 KLHL33A6NCF5 533 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 BBIP1A8MTZ0 92 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 MEI4A8MW99 385 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 K7EQS6 105 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 SLC28A1O00337 649 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 OR7A17O14581 309 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 CHUKO15111 745 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 MID1O15344 667 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 RGS14O43566 566 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 SGTAO43765 313 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 RNASEH2AO75792 299 aaKnown RBP6.59□□□□□ -1.35
SLIRP-204ENST00000555890 MATN4O95460 622 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 CLDN9O95484 217 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 NADKO95544 446 aaPredicted RBP6.59□□□□□ -1.35
SLIRP-204ENST00000555890 KRT6AP02538 564 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 DNTTP04053 509 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 KRT6BP04259 564 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 CAPN1P07384 714 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 JMJD7P0C870 316 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 CD59P13987 128 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 ITGAXP20702 1163 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 DRD1P21728 446 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 BCKDHBP21953 392 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 TEAD1P28347 426 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 PRDX3P30048 256 aaKnown RBP6.59□□□□□ -1.35
SLIRP-204ENST00000555890 CPOXP36551 454 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 KIR2DL1P43626 348 aaPredicted RBP6.59□□□□□ -1.35
SLIRP-204ENST00000555890 KRT6CP48668 564 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 NUDT2P50583 147 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 CTSCP53634 463 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 ATXN3P54252 364 aaPredicted RBP6.59□□□□□ -1.35
SLIRP-204ENST00000555890 RPS14P62263 151 aaKnown RBP6.59□□□□□ -1.35
SLIRP-204ENST00000555890 MRPS21P82921 87 aaKnown RBP6.59□□□□□ -1.35
SLIRP-204ENST00000555890 GRSF1Q12849 480 aaKnown RBP eCLIP6.59□□□□□ -1.35
SLIRP-204ENST00000555890 MAP4K2Q12851 820 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 ABRQ12979 859 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 MAD2L1Q13257 205 aaPredicted RBP6.59□□□□□ -1.35
SLIRP-204ENST00000555890 SGCGQ13326 291 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 C18orf21Q32NC0 220 aaPredicted RBP6.59□□□□□ -1.35
SLIRP-204ENST00000555890 TRMT5Q32P41 509 aaKnown RBP6.59□□□□□ -1.35
SLIRP-204ENST00000555890 KHDC1Q4VXA5 237 aaKnown RBP6.59□□□□□ -1.35
SLIRP-204ENST00000555890 ATP6AP1LQ52LC2 224 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 OGFOD2Q6N063 350 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 IL27RAQ6UWB1 636 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 RNF165Q6ZSG1 346 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 ADGRG6Q86SQ4 1221 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 ULK2Q8IYT8 1036 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 SLC22A15Q8IZD6 547 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 DEFB107AQ8IZN7 70 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 CAMKK1Q8N5S9 505 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 BEND7Q8N7W2 519 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms