RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 SPATA19Q7Z5L4 167 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 ZFAND4Q86XD8 727 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 CPSF7Q8N684 471 aaKnown RBP9.76□□□□□ -0.85
SRP54-208ENST00000555557 C1orf52Q8N6N3 182 aaKnown RBP9.76□□□□□ -0.85
SRP54-208ENST00000555557 POU5F2Q8N7G0 328 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 FAM181AQ8N9Y4 354 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 BAHD1Q8TBE0 780 aaPredicted RBP9.76□□□□□ -0.85
SRP54-208ENST00000555557 CREB3L4Q8TEY5 395 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 ATOH1Q92858 354 aaPredicted RBP9.76□□□□□ -0.85
SRP54-208ENST00000555557 ZUFSPQ96AP4 578 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 CMTM7Q96FZ5 175 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 TEX37Q96LM6 180 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 TRAPPC9Q96Q05 1148 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 F2RL3Q96RI0 385 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 SORBS1Q9BX66 1292 aaKnown RBP9.76□□□□□ -0.85
SRP54-208ENST00000555557 NT5DC2Q9H857 520 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 FAM60AQ9NP50 221 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 DLGAP4Q9Y2H0 992 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 PCDHGA4Q9Y5G9 962 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 GPR45Q9Y5Y3 372 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 LOC105369274A0A096LPK9 316 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 IGHV5-51A0A0C4DH38 117 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 LOC102723532A0A0G2JNH3 316 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 EME2A4GXA9 379 aaPredicted RBP9.76□□□□□ -0.85
SRP54-208ENST00000555557 RTCAO00442 366 aaKnown RBP9.76□□□□□ -0.85
SRP54-208ENST00000555557 CDX4O14627 284 aaPredicted RBP9.76□□□□□ -0.85
SRP54-208ENST00000555557 ZNF806P0C7X5 589 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 T-ENOLP0DO92 83 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 HSD3B1P14060 373 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 TACR1P25103 407 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 HSD3B2P26439 372 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 PIK3R1P27986 724 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 HNRNPH1P31943 449 aaKnown RBP9.76□□□□□ -0.85
SRP54-208ENST00000555557 CSF2RBP32927 897 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 GPR3P46089 330 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 ZNF33BQ06732 778 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 RPS6KA2Q15349 733 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 SNAP47Q5SQN1 464 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 FRMPD2BQ6IN97 320 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 CCDC121Q6ZUS5 278 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 SPRED1Q7Z699 444 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 OR4N4Q8N0Y3 316 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 LIX1Q8N485 282 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 MFSD9Q8NBP5 474 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 CLHC1Q8NHS4 586 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 OR2A5Q96R48 311 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 PHOX2BQ99453 314 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 PITHD1Q9GZP4 211 aaPredicted RBP9.76□□□□□ -0.85
SRP54-208ENST00000555557 AICDAQ9GZX7 198 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 SEMA6CQ9H3T2 930 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 KLHL31Q9H511 634 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 AIG1Q9NVV5 245 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 CCDC167Q9P0B6 97 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 PILRAQ9UKJ1 303 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 ATXN7L1Q9ULK2 861 aaPredicted RBP9.76□□□□□ -0.85
SRP54-208ENST00000555557 TSC22D4Q9Y3Q8 395 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 CAPN7Q9Y6W3 813 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 RP1P56715 2156 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 A0A0G2JN53 185 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 PSMD12O00232 456 aaPredicted RBP9.75□□□□□ -0.85
SRP54-208ENST00000555557 NDUFS4O43181 175 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 RASSF9O75901 435 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 CTSBP07858 339 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 BCKDHAP12694 445 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 IDO1P14902 403 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 GPX3P22352 226 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 PRPH2P23942 346 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 PTX3P26022 381 aaPredicted RBP9.75□□□□□ -0.85
SRP54-208ENST00000555557 HOXD11P31277 338 aaPredicted RBP9.75□□□□□ -0.85
SRP54-208ENST00000555557 CPA2P48052 419 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 STX1BP61266 288 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 UFM1P61960 85 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 SNRPNP63162 240 aaKnown RBP9.75□□□□□ -0.85
SRP54-208ENST00000555557 RAE1P78406 368 aaKnown RBP9.75□□□□□ -0.85
SRP54-208ENST00000555557 PHEXP78562 749 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 DAB2P98082 770 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 NHLH1Q02575 133 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 ACSM2AQ08AH3 577 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 HYAL2Q12891 473 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 BNIP1Q12981 228 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 SQLEQ14534 574 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 PTGR1Q14914 329 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 NR1D2Q14995 579 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 DEFB110Q30KQ9 67 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 AGKQ53H12 422 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 DEPDC1Q5TB30 811 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 KHDRBS2Q5VWX1 349 aaKnown RBP9.75□□□□□ -0.85
SRP54-208ENST00000555557 ACSM2BQ68CK6 577 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 NOXRED1Q6NXP6 359 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 CYP20A1Q6UW02 462 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 TMPRSS9Q7Z410 1059 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 VN1R4Q7Z5H5 301 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 HOMEZQ8IX15 550 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 C19orf47Q8N9M1 422 aaKnown RBP9.75□□□□□ -0.85
SRP54-208ENST00000555557 WDR48Q8TAF3 677 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 CHTF18Q8WVB6 975 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 SLC13A3Q8WWT9 602 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 ZDHHC12Q96GR4 267 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 EGLN2Q96KS0 407 aa9.75□□□□□ -0.85
SRP54-208ENST00000555557 CCDC3Q9BQI4 270 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms