RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 CCDC28BQ9BUN5 200 aa2.65□□□□□ -1.99
SNX6-204ENST00000555541 APOL6Q9BWW8 343 aa2.65□□□□□ -1.99
SNX6-204ENST00000555541 SDCBP2Q9H190 292 aa2.65□□□□□ -1.99
SNX6-204ENST00000555541 ACTL8Q9H568 366 aa2.65□□□□□ -1.99
SNX6-204ENST00000555541 RAVER2Q9HCJ3 691 aaKnown RBP2.65□□□□□ -1.99
SNX6-204ENST00000555541 IL36AQ9UHA7 158 aa2.65□□□□□ -1.99
SNX6-204ENST00000555541 A0A087WZ39 114 aa2.64□□□□□ -1.99
SNX6-204ENST00000555541 GLTPD2A6NH11 291 aa2.64□□□□□ -1.99
SNX6-204ENST00000555541 KRTAP4-16G5E9R7 235 aaPredicted RBP2.64□□□□□ -1.99
SNX6-204ENST00000555541 RNF103O00237 685 aa2.64□□□□□ -1.99
SNX6-204ENST00000555541 OGTO15294 1046 aa2.64□□□□□ -1.99
SNX6-204ENST00000555541 AP5Z1O43299 807 aa2.64□□□□□ -1.99
SNX6-204ENST00000555541 SLCO2B1O94956 709 aa2.64□□□□□ -1.99
SNX6-204ENST00000555541 EEF1B2P24534 225 aaKnown RBP2.64□□□□□ -1.99
SNX6-204ENST00000555541 AZGP1P25311 298 aaKnown RBP2.64□□□□□ -1.99
SNX6-204ENST00000555541 NNMTP40261 264 aa2.64□□□□□ -1.99
SNX6-204ENST00000555541 KHKP50053 298 aa2.64□□□□□ -1.99
SNX6-204ENST00000555541 ALCAMQ13740 583 aa2.64□□□□□ -1.99
SNX6-204ENST00000555541 DUSP5Q16690 384 aa2.64□□□□□ -1.99
SNX6-204ENST00000555541 UPP1Q16831 310 aa2.64□□□□□ -1.99
SNX6-204ENST00000555541 LETM2Q2VYF4 491 aa2.64□□□□□ -1.99
SNX6-204ENST00000555541 FAM106AQ4KMX7 169 aa2.64□□□□□ -1.99
SNX6-204ENST00000555541 MZT2BQ6NZ67 158 aa2.64□□□□□ -1.99
SNX6-204ENST00000555541 CYB5D1Q6P9G0 228 aa2.64□□□□□ -1.99
SNX6-204ENST00000555541 BAIAP2L2Q6UXY1 529 aa2.64□□□□□ -1.99
SNX6-204ENST00000555541 CPEB2Q7Z5Q1 589 aaKnown RBP2.64□□□□□ -1.99
SNX6-204ENST00000555541 CCDC60Q8IWA6 550 aaPredicted RBP2.64□□□□□ -1.99
SNX6-204ENST00000555541 SLC22A15Q8IZD6 547 aa2.64□□□□□ -1.99
SNX6-204ENST00000555541 GBP7Q8N8V2 638 aaPredicted RBP2.64□□□□□ -1.99
SNX6-204ENST00000555541 CSNK1G2-AS1Q8NCQ2 148 aa2.64□□□□□ -1.99
SNX6-204ENST00000555541 SPPL2AQ8TCT8 520 aa2.64□□□□□ -1.99
SNX6-204ENST00000555541 SSC4DQ8WTU2 575 aa2.64□□□□□ -1.99
SNX6-204ENST00000555541 LRRC3BQ96PB8 259 aa2.64□□□□□ -1.99
SNX6-204ENST00000555541 OCR1Q9BZK8 76 aa2.64□□□□□ -1.99
SNX6-204ENST00000555541 TBC1D7Q9P0N9 293 aa2.64□□□□□ -1.99
SNX6-204ENST00000555541 RPS6KA6Q9UK32 745 aa2.64□□□□□ -1.99
SNX6-204ENST00000555541 TRPV2Q9Y5S1 764 aa2.64□□□□□ -1.99
SNX6-204ENST00000555541 IL16Q14005 1332 aa2.64□□□□□ -1.99
SNX6-204ENST00000555541 IQCMA0A1B0GVH7 501 aa2.63□□□□□ -1.99
SNX6-204ENST00000555541 SRRM4A7MD48 611 aaKnown RBP2.63□□□□□ -1.99
SNX6-204ENST00000555541 ARHGEF33A8MVX0 844 aa2.63□□□□□ -1.99
SNX6-204ENST00000555541 SAP30O75446 220 aa2.63□□□□□ -1.99
SNX6-204ENST00000555541 PRDM1O75626 825 aa2.63□□□□□ -1.99
SNX6-204ENST00000555541 GFPT2O94808 682 aa2.63□□□□□ -1.99
SNX6-204ENST00000555541 NR2F1P10589 423 aa2.63□□□□□ -1.99
SNX6-204ENST00000555541 CD59P13987 128 aa2.63□□□□□ -1.99
SNX6-204ENST00000555541 PKLRP30613 574 aa2.63□□□□□ -1.99
SNX6-204ENST00000555541 NDUFV3P56181 108 aaKnown RBP2.63□□□□□ -1.99
SNX6-204ENST00000555541 ILF2Q12905 390 aaKnown RBP2.63□□□□□ -1.99
SNX6-204ENST00000555541 BMP2KLQ5H9B9 411 aa2.63□□□□□ -1.99
SNX6-204ENST00000555541 FGD3Q5JSP0 725 aa2.63□□□□□ -1.99
SNX6-204ENST00000555541 RNLSQ5VYX0 342 aa2.63□□□□□ -1.99
SNX6-204ENST00000555541 REG3GQ6UW15 175 aa2.63□□□□□ -1.99
SNX6-204ENST00000555541 PRSS55Q6UWB4 352 aaPredicted RBP2.63□□□□□ -1.99
SNX6-204ENST00000555541 IQCHQ86VS3 1027 aa2.63□□□□□ -1.99
SNX6-204ENST00000555541 CATSPER3Q86XQ3 398 aa2.63□□□□□ -1.99
SNX6-204ENST00000555541 RTL3Q8N8U3 475 aaKnown RBP2.63□□□□□ -1.99
SNX6-204ENST00000555541 SLC4A11Q8NBS3 891 aa2.63□□□□□ -1.99
SNX6-204ENST00000555541 C11orf52Q96A22 123 aa2.63□□□□□ -1.99
SNX6-204ENST00000555541 CNOT6LQ96LI5 555 aaKnown RBP2.63□□□□□ -1.99
SNX6-204ENST00000555541 LINC00167Q96N53 147 aa2.63□□□□□ -1.99
SNX6-204ENST00000555541 NDNQ99608 321 aa2.63□□□□□ -1.99
SNX6-204ENST00000555541 TNFRSF19Q9NS68 423 aa2.63□□□□□ -1.99
SNX6-204ENST00000555541 NYAP2Q9P242 653 aa2.63□□□□□ -1.99
SNX6-204ENST00000555541 B4GALT7Q9UBV7 327 aa2.63□□□□□ -1.99
SNX6-204ENST00000555541 PILRBQ9UKJ0 227 aa2.63□□□□□ -1.99
SNX6-204ENST00000555541 MRPS18CQ9Y3D5 142 aaKnown RBP2.63□□□□□ -1.99
SNX6-204ENST00000555541 NPHP3Q7Z494 1330 aa2.63□□□□□ -1.99
SNX6-204ENST00000555541 PASKQ96RG2 1323 aa2.63□□□□□ -1.99
SNX6-204ENST00000555541 TRBC2A0A5B9 178 aa2.62□□□□□ -1.99
SNX6-204ENST00000555541 TRIM49BA6NDI0 452 aa2.62□□□□□ -1.99
SNX6-204ENST00000555541 F8VVB4 439 aa2.62□□□□□ -1.99
SNX6-204ENST00000555541 F8VWA3 439 aa2.62□□□□□ -1.99
SNX6-204ENST00000555541 RTCAO00442 366 aaKnown RBP2.62□□□□□ -1.99
SNX6-204ENST00000555541 AHCYL1O43865 530 aa2.62□□□□□ -1.99
SNX6-204ENST00000555541 MTRF1O75570 445 aaKnown RBP2.62□□□□□ -1.99
SNX6-204ENST00000555541 CELF2O95319 508 aaKnown RBP2.62□□□□□ -1.99
SNX6-204ENST00000555541 SERPING1P05155 500 aa2.62□□□□□ -1.99
SNX6-204ENST00000555541 F3P13726 295 aa2.62□□□□□ -1.99
SNX6-204ENST00000555541 GPR183P32249 361 aa2.62□□□□□ -1.99
SNX6-204ENST00000555541 CSE1LP55060 971 aaKnown RBP2.62□□□□□ -1.99
SNX6-204ENST00000555541 UBASH3AP57075 661 aa2.62□□□□□ -1.99
SNX6-204ENST00000555541 ACSM1Q08AH1 577 aa2.62□□□□□ -1.99
SNX6-204ENST00000555541 RALGDSQ12967 914 aa2.62□□□□□ -1.99
SNX6-204ENST00000555541 PTGISQ16647 500 aa2.62□□□□□ -1.99
SNX6-204ENST00000555541 TLK2Q86UE8 772 aa2.62□□□□□ -1.99
SNX6-204ENST00000555541 PARP8Q8N3A8 854 aa2.62□□□□□ -1.99
SNX6-204ENST00000555541 C4orf32Q8N8J7 132 aa2.62□□□□□ -1.99
SNX6-204ENST00000555541 OR4C15Q8NGM1 316 aa2.62□□□□□ -1.99
SNX6-204ENST00000555541 RPLP0P6Q8NHW5 317 aa2.62□□□□□ -1.99
SNX6-204ENST00000555541 NEDD4LQ96PU5 975 aa2.62□□□□□ -1.99
SNX6-204ENST00000555541 ZNF581Q9P0T4 197 aa2.62□□□□□ -1.99
SNX6-204ENST00000555541 MORF4L1Q9UBU8 362 aa2.62□□□□□ -1.99
SNX6-204ENST00000555541 FBXL4Q9UKA2 621 aa2.62□□□□□ -1.99
SNX6-204ENST00000555541 POMT2Q9UKY4 750 aa2.62□□□□□ -1.99
SNX6-204ENST00000555541 ZNF256Q9Y2P7 627 aaPredicted RBP2.62□□□□□ -1.99
SNX6-204ENST00000555541 FAM169AQ9Y6X4 670 aa2.62□□□□□ -1.99
SNX6-204ENST00000555541 NEDD4P46934 1319 aa2.62□□□□□ -1.99
SNX6-204ENST00000555541 hCG_38984A0A1B0GV85 526 aa2.61□□□□□ -1.99
SNX6-204ENST00000555541 C17orf105B2RV13 164 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms