RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 CRABP2P29373 138 aa12.97□□□□□ -0.33
SNX6-203ENST00000555416 SCTRP47872 440 aa12.97□□□□□ -0.33
SNX6-203ENST00000555416 HSPA7P48741 367 aa12.97□□□□□ -0.33
SNX6-203ENST00000555416 AGTR2P50052 363 aa12.97□□□□□ -0.33
SNX6-203ENST00000555416 HNMTP50135 292 aa12.97□□□□□ -0.33
SNX6-203ENST00000555416 ATP6V0D1P61421 351 aa12.97□□□□□ -0.33
SNX6-203ENST00000555416 FAM53BQ14153 422 aa12.97□□□□□ -0.33
SNX6-203ENST00000555416 DCAF10Q5QP82 559 aa12.97□□□□□ -0.33
SNX6-203ENST00000555416 SLCO4C1Q6ZQN7 724 aa12.97□□□□□ -0.33
SNX6-203ENST00000555416 ASB18Q6ZVZ8 466 aa12.97□□□□□ -0.33
SNX6-203ENST00000555416 MED25Q71SY5 747 aa12.97□□□□□ -0.33
SNX6-203ENST00000555416 PRICKLE2Q7Z3G6 844 aa12.97□□□□□ -0.33
SNX6-203ENST00000555416 ZC3H7AQ8IWR0 971 aaKnown RBP12.97□□□□□ -0.33
SNX6-203ENST00000555416 GSPT2Q8IYD1 628 aaKnown RBP12.97□□□□□ -0.33
SNX6-203ENST00000555416 SLC44A1Q8WWI5 657 aa12.97□□□□□ -0.33
SNX6-203ENST00000555416 SLC13A3Q8WWT9 602 aa12.97□□□□□ -0.33
SNX6-203ENST00000555416 MIEF2Q96C03 454 aa12.97□□□□□ -0.33
SNX6-203ENST00000555416 C8orf44Q96CB5 159 aa12.97□□□□□ -0.33
SNX6-203ENST00000555416 MVB12AQ96EY5 273 aa12.97□□□□□ -0.33
SNX6-203ENST00000555416 ATOH8Q96SQ7 321 aa12.97□□□□□ -0.33
SNX6-203ENST00000555416 CRB3Q9BUF7 120 aa12.97□□□□□ -0.33
SNX6-203ENST00000555416 SLC25A23Q9BV35 468 aa12.97□□□□□ -0.33
SNX6-203ENST00000555416 YIPF2Q9BWQ6 316 aa12.97□□□□□ -0.33
SNX6-203ENST00000555416 TRIM4Q9C037 500 aa12.97□□□□□ -0.33
SNX6-203ENST00000555416 CD274Q9NZQ7 290 aa12.97□□□□□ -0.33
SNX6-203ENST00000555416 ZNF282Q9UDV7 671 aaPredicted RBP12.97□□□□□ -0.33
SNX6-203ENST00000555416 FBXL4Q9UKA2 621 aa12.97□□□□□ -0.33
SNX6-203ENST00000555416 PTBP2Q9UKA9 531 aaKnown RBP12.97□□□□□ -0.33
SNX6-203ENST00000555416 BAHCC1Q9P281 2608 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 NUP210LQ5VU65 1888 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 ZNF860A6NHJ4 632 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 AGPSO00116 658 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 UBXN8O00124 270 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 TXNDC9O14530 226 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 SLC28A2O43868 658 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 CD63P08962 238 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 LTA4HP09960 611 aaKnown RBP12.96□□□□□ -0.33
SNX6-203ENST00000555416 MYBL2P10244 700 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 MTHFD2P13995 350 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 PHBP35232 272 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 GGT5P36269 586 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 OCA2Q04671 838 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 Q0VFX4 171 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 HYAL2Q12891 473 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 ADNP2Q6IQ32 1131 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 PLD6Q8N2A8 252 aaKnown RBP12.96□□□□□ -0.33
SNX6-203ENST00000555416 TMEM102Q8N9M5 508 aaPredicted RBP12.96□□□□□ -0.33
SNX6-203ENST00000555416 CAMKVQ8NCB2 501 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 PDPRQ8NCN5 879 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 DCAKDQ8WVC6 231 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 GPR78Q96P69 363 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 PAFAH2Q99487 392 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 TXLNGYQ9BZA5 131 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 KLHL31Q9H511 634 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 L2HGDHQ9H9P8 463 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 PELI2Q9HAT8 420 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 ZNF358Q9NW07 568 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 WWOXQ9NZC7 414 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 HCN3Q9P1Z3 774 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 C3orf18Q9UK00 162 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 NXT1Q9UKK6 140 aaKnown RBP12.96□□□□□ -0.33
SNX6-203ENST00000555416 RNF112Q9ULX5 631 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 CDC14AQ9UNH5 594 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 DYRK1BQ9Y463 629 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 MAP4K5Q9Y4K4 846 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 PCDHGA9Q9Y5G4 932 aaKnown RBP12.96□□□□□ -0.33
SNX6-203ENST00000555416 KCNE2Q9Y6J6 123 aa12.96□□□□□ -0.33
SNX6-203ENST00000555416 A0A096LPK6 155 aa12.95□□□□□ -0.34
SNX6-203ENST00000555416 LRRC14BA6NHZ5 514 aa12.95□□□□□ -0.34
SNX6-203ENST00000555416 IDSB3KWA1 339 aa12.95□□□□□ -0.34
SNX6-203ENST00000555416 PEX12O00623 359 aa12.95□□□□□ -0.34
SNX6-203ENST00000555416 NDUFS4O43181 175 aa12.95□□□□□ -0.34
SNX6-203ENST00000555416 RDH16O75452 317 aa12.95□□□□□ -0.34
SNX6-203ENST00000555416 KLHL18O94889 574 aa12.95□□□□□ -0.34
SNX6-203ENST00000555416 NSA2O95478 260 aaKnown RBP12.95□□□□□ -0.34
SNX6-203ENST00000555416 SERPIND1P05546 499 aa12.95□□□□□ -0.34
SNX6-203ENST00000555416 C1GALT1C1LP0DN25 315 aa12.95□□□□□ -0.34
SNX6-203ENST00000555416 CD22P20273 847 aa12.95□□□□□ -0.34
SNX6-203ENST00000555416 GCAP28676 217 aa12.95□□□□□ -0.34
SNX6-203ENST00000555416 GRK3P35626 688 aa12.95□□□□□ -0.34
SNX6-203ENST00000555416 GLRBP48167 497 aa12.95□□□□□ -0.34
SNX6-203ENST00000555416 RBBP7Q16576 425 aa12.95□□□□□ -0.34
SNX6-203ENST00000555416 NDUFA9Q16795 377 aa12.95□□□□□ -0.34
SNX6-203ENST00000555416 CDKL4Q5MAI5 379 aa12.95□□□□□ -0.34
SNX6-203ENST00000555416 ATG9BQ674R7 924 aa12.95□□□□□ -0.34
SNX6-203ENST00000555416 FAAH2Q6GMR7 532 aa12.95□□□□□ -0.34
SNX6-203ENST00000555416 SULT1C3Q6IMI6 304 aa12.95□□□□□ -0.34
SNX6-203ENST00000555416 TBC1D1Q86TI0 1168 aaPredicted RBP12.95□□□□□ -0.34
SNX6-203ENST00000555416 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.95□□□□□ -0.341e-6■□□□□ 9.2
SNX6-203ENST00000555416 AFAP1L2Q8N4X5 818 aa12.95□□□□□ -0.34
SNX6-203ENST00000555416 OR11G2Q8NGC1 345 aa12.95□□□□□ -0.34
SNX6-203ENST00000555416 OR5T3Q8NGG3 340 aa12.95□□□□□ -0.34
SNX6-203ENST00000555416 CREB3L4Q8TEY5 395 aa12.95□□□□□ -0.34
SNX6-203ENST00000555416 IP6K3Q96PC2 410 aa12.95□□□□□ -0.34
SNX6-203ENST00000555416 EPB41L4BQ9H329 900 aa12.95□□□□□ -0.34
SNX6-203ENST00000555416 NMRAL1Q9HBL8 299 aa12.95□□□□□ -0.34
SNX6-203ENST00000555416 SEMA3GQ9NS98 782 aa12.95□□□□□ -0.34
SNX6-203ENST00000555416 ZFP69BQ9UJL9 534 aa12.95□□□□□ -0.34
SNX6-203ENST00000555416 ACOT9Q9Y305 439 aa12.95□□□□□ -0.34
SNX6-203ENST00000555416 NAALAD2Q9Y3Q0 740 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms