RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 SLC26A1Q9H2B4 701 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 SOX17Q9H6I2 414 aaPredicted RBP11.51□□□□□ -0.57
SRP54-206ENST00000555317 SLC22A11Q9NSA0 550 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 C14orf105Q9NVL8 296 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 ANGPTL3Q9Y5C1 460 aa11.51□□□□□ -0.57
SRP54-206ENST00000555317 HEMK1Q9Y5R4 338 aaPredicted RBP11.51□□□□□ -0.57
SRP54-206ENST00000555317 PRRC2CQ9Y520 2896 aaKnown RBP11.51□□□□□ -0.57
SRP54-206ENST00000555317 HMX2A2RU54 273 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 URADA6NGE7 173 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 ESPNB1AK53 854 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 LCMT2O60294 686 aaKnown RBP11.5□□□□□ -0.57
SRP54-206ENST00000555317 ONECUT2O95948 504 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 PRB1P04280 392 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 SNRPAP09012 282 aaKnown RBP11.5□□□□□ -0.57
SRP54-206ENST00000555317 RBP1P09455 135 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 FAM153BP0C7A2 387 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 C1GALT1C1LP0DN25 315 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 VARSP26640 1264 aaKnown RBP11.5□□□□□ -0.57
SRP54-206ENST00000555317 GGT5P36269 586 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 GMPRP36959 345 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 DLG1Q12959 904 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 PWP1Q13610 501 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 HERC3Q15034 1050 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 HIST2H2ACQ16777 129 aaPredicted RBP11.5□□□□□ -0.57
SRP54-206ENST00000555317 TSNAXIP1Q2TAA8 658 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 FAM153CQ494X1 144 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 FBXO48Q5FWF7 155 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 XKR6Q5GH73 641 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 PAGE2BQ5JRK9 111 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 MFSD4BQ5TF39 518 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 ATG9BQ674R7 924 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 HIST2H2AA3Q6FI13 130 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 NIPAL1Q6NVV3 410 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 SHISA6Q6ZSJ9 500 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 MED25Q71SY5 747 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 COX15Q7KZN9 410 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 ABHD13Q7L211 337 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 ISCA2Q86U28 154 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 APLFQ8IW19 511 aaPredicted RBP11.5□□□□□ -0.57
SRP54-206ENST00000555317 KLHDC8AQ8IYD2 350 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 CENPLQ8N0S6 344 aaPredicted RBP11.5□□□□□ -0.57
SRP54-206ENST00000555317 DTWD1Q8N5C7 304 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 CLEC1AQ8NC01 280 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 TRPV3Q8NET8 790 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 ADAMTS17Q8TE56 1095 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 DCAKDQ8WVC6 231 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 UBLCP1Q8WVY7 318 aaPredicted RBP11.5□□□□□ -0.57
SRP54-206ENST00000555317 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.5□□□□□ -0.57
SRP54-206ENST00000555317 CCT6BQ92526 530 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 MTBPQ96DY7 904 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 FER1L6-AS2Q96M78 137 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 MACROD1Q9BQ69 325 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 TMEM79Q9BSE2 394 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 SARGQ9BW04 601 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 SLC25A18Q9H1K4 315 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 SYNPO2LQ9H987 977 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 MKKSQ9NPJ1 570 aaPredicted RBP11.5□□□□□ -0.57
SRP54-206ENST00000555317 SEMA3GQ9NS98 782 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 CPSF2Q9P2I0 782 aaKnown RBP11.5□□□□□ -0.57
SRP54-206ENST00000555317 PSMC3IPQ9P2W1 217 aaPredicted RBP11.5□□□□□ -0.57
SRP54-206ENST00000555317 OPTCQ9UBM4 332 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 ZFP69BQ9UJL9 534 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 PTBP2Q9UKA9 531 aaKnown RBP11.5□□□□□ -0.57
SRP54-206ENST00000555317 MAP4K5Q9Y4K4 846 aa11.5□□□□□ -0.57
SRP54-206ENST00000555317 IQANK1A0A1B0GTG1 560 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 H0YIG0 161 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 TAPBPO15533 448 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 CNOT3O75175 753 aaKnown RBP11.49□□□□□ -0.57
SRP54-206ENST00000555317 SLU7O95391 586 aaKnown RBP11.49□□□□□ -0.57
SRP54-206ENST00000555317 MED26O95402 600 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 NSA2O95478 260 aaKnown RBP11.49□□□□□ -0.57
SRP54-206ENST00000555317 HEXBP07686 556 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 ZGLP1P0C6A0 271 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 IL1RNP18510 177 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 MMP11P24347 488 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 TNFRSF8P28908 595 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 HPDP32754 393 aaPredicted RBP11.49□□□□□ -0.57
SRP54-206ENST00000555317 SCTRP47872 440 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 CCL11P51671 97 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 KLC1Q07866 573 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 NFATC3Q12968 1075 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 CHAF1BQ13112 559 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 LAPTM5Q13571 262 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 SLBPQ14493 270 aaKnown RBP eCLIP11.49□□□□□ -0.57
SRP54-206ENST00000555317 SLC29A2Q14542 456 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 LACTB2Q53H82 288 aaPredicted RBP11.49□□□□□ -0.57
SRP54-206ENST00000555317 IRAK1BP1Q5VVH5 260 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 CPZQ66K79 652 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 TMEM214Q6NUQ4 689 aaKnown RBP11.49□□□□□ -0.57
SRP54-206ENST00000555317 TMIGD1Q6UXZ0 262 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 SLCO4C1Q6ZQN7 724 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 KCT2Q8NC54 265 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 ZNF740Q8NDX6 193 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 OR9A4Q8NGU2 314 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 STT3BQ8TCJ2 826 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 UBTD2Q8WUN7 234 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 NACC2Q96BF6 587 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 PTCD3Q96EY7 689 aaKnown RBP11.49□□□□□ -0.57
SRP54-206ENST00000555317 ATOH8Q96SQ7 321 aa11.49□□□□□ -0.57
SRP54-206ENST00000555317 SPSB2Q99619 263 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms