RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 PWP1Q13610 501 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 CSHL1Q14406 222 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 USP10Q14694 798 aaKnown RBP7.14□□□□□ -1.27
LINC00640-201ENST00000554409 MYBPC3Q14896 1274 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 NR6A1Q15406 480 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 TGFBIQ15582 683 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 RBBP7Q16576 425 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 GLE1Q53GS7 698 aaKnown RBP7.14□□□□□ -1.27
LINC00640-201ENST00000554409 VWA2Q5GFL6 755 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 ATG9BQ674R7 924 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 KIRREL2Q6UWL6 708 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 IGFL3Q6UXB1 125 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 CEP128Q6ZU80 1094 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 FRA10AC1Q70Z53 315 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 CCDC91Q7Z6B0 441 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 ASPGQ86U10 573 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 THOC6Q86W42 341 aaKnown RBP7.14□□□□□ -1.27
LINC00640-201ENST00000554409 CTAGE3PQ8IX95 158 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 TCAIMQ8N3R3 496 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 GALNT16Q8N428 558 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 TBC1D19Q8N5T2 526 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 PPM1NQ8N819 430 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 CAMKVQ8NCB2 501 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 MNS1Q8NEH6 495 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 OR11G2Q8NGC1 345 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 NT5CQ8TCD5 201 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 FBF1Q8TES7 1133 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 SLC13A3Q8WWT9 602 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 SLC5A11Q8WWX8 675 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 NEIL2Q969S2 332 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 ALKBH8Q96BT7 664 aaKnown RBP7.14□□□□□ -1.27
LINC00640-201ENST00000554409 RHBDF1Q96CC6 855 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 MMABQ96EY8 250 aaPredicted RBP7.14□□□□□ -1.27
LINC00640-201ENST00000554409 CRB3Q9BUF7 120 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 FUT8Q9BYC5 575 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 TSPYL1Q9H0U9 437 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 SOX17Q9H6I2 414 aaPredicted RBP7.14□□□□□ -1.27
LINC00640-201ENST00000554409 ZNF552Q9H707 407 aaPredicted RBP7.14□□□□□ -1.27
LINC00640-201ENST00000554409 CAB39LQ9H9S4 337 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 TRPC4Q9UBN4 977 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 C3orf18Q9UK00 162 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 FBXL4Q9UKA2 621 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 BSNQ9UPA5 3926 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 MRPS2Q9Y399 296 aaKnown RBP7.14□□□□□ -1.27
LINC00640-201ENST00000554409 DYRK1BQ9Y463 629 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 SLC22A7Q9Y694 548 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 KCNE2Q9Y6J6 123 aa7.14□□□□□ -1.27
LINC00640-201ENST00000554409 GCN1Q92616 2671 aaKnown RBP7.14□□□□□ -1.27
LINC00640-201ENST00000554409 LOC102723996A0A087X1L8 192 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 CCDC189A1A4V9 331 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 CTAGE15A4D2H0 777 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 A6NL46 340 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 IDSB3KWA1 339 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 MAP2K7O14733 419 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 PHGDHO43175 533 aaKnown RBP7.13□□□□□ -1.27
LINC00640-201ENST00000554409 OR1F1O43749 312 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 FAM155BO75949 473 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 SORBS2O94875 1100 aaKnown RBP7.13□□□□□ -1.27
LINC00640-201ENST00000554409 HPP00738 406 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 AVPP01185 164 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 ALPPP05187 535 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 CTAGE8P0CG41 777 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 SLC35E2BP0CK96 405 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 CCDC166P0CW27 439 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 ACPPP15309 386 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 GSTM2P28161 218 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 CRABP2P29373 138 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 PHBP35232 272 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 AHRP35869 848 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 SCTRP47872 440 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 SNRPNP63162 240 aaKnown RBP7.13□□□□□ -1.27
LINC00640-201ENST00000554409 MEF2AQ02078 507 aaPredicted RBP7.13□□□□□ -1.27
LINC00640-201ENST00000554409 EFTUD2Q15029 972 aaKnown RBP eCLIP7.13□□□□□ -1.27
LINC00640-201ENST00000554409 HERC3Q15034 1050 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 CATSPEREQ5SY80 951 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 SULT1C3Q6IMI6 304 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 NIPAL1Q6NVV3 410 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 TMEM205Q6UW68 189 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 NXPE4Q6UWF7 544 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 SHISA6Q6ZSJ9 500 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 PRSS41Q7RTY9 318 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 CTAGE6Q86UF2 777 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 ZC3H7AQ8IWR0 971 aaKnown RBP7.13□□□□□ -1.27
LINC00640-201ENST00000554409 CTAGE4Q8IX94 777 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 AFAP1L2Q8N4X5 818 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 KCT2Q8NC54 265 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 NOA1Q8NC60 698 aaKnown RBP7.13□□□□□ -1.27
LINC00640-201ENST00000554409 PDPRQ8NCN5 879 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 OR9A4Q8NGU2 314 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 KIF18AQ8NI77 898 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 ZNF592Q92610 1267 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 KIAA1191Q96A73 305 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 TSNARE1Q96NA8 513 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 EGFL8Q99944 293 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 AIF1LQ9BQI0 150 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 TMEM79Q9BSE2 394 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 CAPS2Q9BXY5 557 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 TRIM4Q9C037 500 aa7.13□□□□□ -1.27
LINC00640-201ENST00000554409 PITHD1Q9GZP4 211 aaPredicted RBP7.13□□□□□ -1.27
LINC00640-201ENST00000554409 SPNS1Q9H2V7 528 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms