RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 CNSTQ6PJW8 725 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 CES3Q6UWW8 571 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 CD300LGQ6UXG3 332 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 DCDC5Q6ZRR9 648 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 LHFPL2Q6ZUX7 228 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 NCCRP1Q6ZVX7 275 aaPredicted RBP5.75□□□□□ -1.49
VPS33B-203ENST00000554264 KCTD8Q6ZWB6 473 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 KANSL1Q7Z3B3 1105 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 CEP97Q8IW35 865 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 SLC15A3Q8IY34 581 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 C8orf59Q8N0T1 100 aaPredicted RBP5.75□□□□□ -1.49
VPS33B-203ENST00000554264 CARNMT1Q8N4J0 409 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 CAMKK1Q8N5S9 505 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 RNF148Q8N7C7 305 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 SCAIQ8N9R8 606 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 OR8J3Q8NGG0 315 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 STAG3L4Q8TBR4 150 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 TBC1D15Q8TC07 691 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 CYGBQ8WWM9 190 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 HDAC10Q969S8 669 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 ZNF566Q969W8 418 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 RELTQ969Z4 430 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 VPS33AQ96AX1 596 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 VMP1Q96GC9 406 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 C1orf74Q96LT6 269 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 NSMCE2Q96MF7 247 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 SLC29A1Q99808 456 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 RBM4BQ9BQ04 359 aaKnown RBP5.75□□□□□ -1.49
VPS33B-203ENST00000554264 PSD2Q9BQI7 771 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 FEM1AQ9BSK4 669 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 FICDQ9BVA6 458 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 RBM4Q9BWF3 364 aaKnown RBP5.75□□□□□ -1.49
VPS33B-203ENST00000554264 TKTL2Q9H0I9 626 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 PCDHAC1Q9H158 963 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 ING2Q9H160 280 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 SEMA6AQ9H2E6 1030 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 DPEP3Q9H4B8 488 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 MAGIXQ9H6Y5 334 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 NECTIN3Q9NQS3 549 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 ABCC13Q9NSE7 274 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 COMMD8Q9NX08 183 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 DDIT4Q9NX09 232 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 PPP4R1LQ9P1A2 415 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 Q9UFV3 132 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 TUBGCP4Q9UGJ1 667 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 POLG2Q9UHN1 485 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 C3orf18Q9UK00 162 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 AURKCQ9UQB9 309 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 ERVW-1Q9UQF0 538 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 PCDHGB1Q9Y5G3 927 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 ORC6Q9Y5N6 252 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 NOTCH4Q99466 2003 aa5.75□□□□□ -1.49
VPS33B-203ENST00000554264 MYLKQ15746 1914 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 SAGE2PA6NJ88 616 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 C4orf47A7E2U8 309 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 FXYD1O00168 92 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 NR5A2O00482 541 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 KERAO60938 352 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 CNOT3O75175 753 aaKnown RBP5.74□□□□□ -1.49
VPS33B-203ENST00000554264 USP12O75317 370 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 SERPINB7O75635 380 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 SLC22A3O75751 556 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 FGF19O95750 216 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 PLATP00750 562 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 IGLV3-25P01717 112 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 FGF1P05230 155 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 JUNP05412 331 aaKnown RBP5.74□□□□□ -1.49
VPS33B-203ENST00000554264 CCDC159P0C7I6 412 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 UROSP10746 265 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 THRBP10828 461 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 CEACAM1P13688 526 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 GJA1P17302 382 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 UGT1A6P19224 532 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 CSRP1P21291 193 aaKnown RBP5.74□□□□□ -1.49
VPS33B-203ENST00000554264 SAT1P21673 171 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 UGT1A1P22309 533 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 UGT1A4P22310 534 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 S100A1P23297 94 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 EEF1DP29692 281 aaKnown RBP5.74□□□□□ -1.49
VPS33B-203ENST00000554264 UGT1A3P35503 534 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 UGT1A5P35504 534 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 RAD23AP54725 363 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 RRADP55042 308 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 CXCR4P61073 352 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 PPP2CBP62714 309 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 ERVK-8P63133 956 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 PPP2CAP67775 309 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 ROM1Q03395 351 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 EMX2Q04743 252 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 CHRNB3Q05901 458 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 PRKG2Q13237 762 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 NFYCQ13952 458 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 GK3PQ14409 553 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 POU6F1Q14863 301 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 NR1D2Q14995 579 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 GEN1Q17RS7 908 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 TRIM16LQ309B1 348 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 ITPRIPL2Q3MIP1 535 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 UGT3A2Q3SY77 523 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 PLK5Q496M5 336 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms