RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 RSC1A1Q92681 617 aa15.41■□□□□ 0.06
ACTN1-209ENST00000553659 CXorf40BQ96DE9 158 aa15.41■□□□□ 0.06
ACTN1-209ENST00000553659 DCUN1D1Q96GG9 259 aa15.41■□□□□ 0.06
ACTN1-209ENST00000553659 PSMG3-AS1Q96PY0 264 aa15.41■□□□□ 0.06
ACTN1-209ENST00000553659 TWSG1Q9GZX9 223 aa15.41■□□□□ 0.06
ACTN1-209ENST00000553659 ZNF385DQ9H6B1 395 aa15.41■□□□□ 0.06
ACTN1-209ENST00000553659 PIPSLA2A3N6 862 aa15.4■□□□□ 0.06
ACTN1-209ENST00000553659 CDC14CA4D256 554 aa15.4■□□□□ 0.06
ACTN1-209ENST00000553659 OR52A4PA6NMU1 304 aa15.4■□□□□ 0.06
ACTN1-209ENST00000553659 CDC7O00311 574 aa15.4■□□□□ 0.06
ACTN1-209ENST00000553659 GPC4O75487 556 aa15.4■□□□□ 0.06
ACTN1-209ENST00000553659 CRCPO75575 148 aa15.4■□□□□ 0.06
ACTN1-209ENST00000553659 COX4I1P13073 169 aa15.4■□□□□ 0.06
ACTN1-209ENST00000553659 NELFEP18615 380 aaKnown RBP15.4■□□□□ 0.06
ACTN1-209ENST00000553659 PIK3R1P27986 724 aa15.4■□□□□ 0.06
ACTN1-209ENST00000553659 EEF1DP29692 281 aaKnown RBP15.4■□□□□ 0.06
ACTN1-209ENST00000553659 MLLT10P55197 1068 aa15.4■□□□□ 0.06
ACTN1-209ENST00000553659 PKNOX1P55347 436 aa15.4■□□□□ 0.06
ACTN1-209ENST00000553659 BTKQ06187 659 aa15.4■□□□□ 0.06
ACTN1-209ENST00000553659 TMEM115Q12893 351 aaPredicted RBP15.4■□□□□ 0.06
ACTN1-209ENST00000553659 DNASE1L3Q13609 305 aa15.4■□□□□ 0.06
ACTN1-209ENST00000553659 PCBP2Q15366 365 aaKnown RBP eCLIP15.4■□□□□ 0.065e-6■■□□□ 13.6
ACTN1-209ENST00000553659 KHDC1Q4VXA5 237 aaKnown RBP15.4■□□□□ 0.06
ACTN1-209ENST00000553659 KANK2Q63ZY3 851 aa15.4■□□□□ 0.06
ACTN1-209ENST00000553659 IRGCQ6NXR0 463 aa15.4■□□□□ 0.06
ACTN1-209ENST00000553659 C16orf89Q6UX73 402 aa15.4■□□□□ 0.06
ACTN1-209ENST00000553659 FAM92BQ6ZTR7 304 aa15.4■□□□□ 0.06
ACTN1-209ENST00000553659 CHSY3Q70JA7 882 aa15.4■□□□□ 0.06
ACTN1-209ENST00000553659 C11orf96Q7Z7L8 435 aa15.4■□□□□ 0.06
ACTN1-209ENST00000553659 APLFQ8IW19 511 aaPredicted RBP15.4■□□□□ 0.06
ACTN1-209ENST00000553659 RBM15BQ8NDT2 890 aaKnown RBP15.4■□□□□ 0.06
ACTN1-209ENST00000553659 FCRL4Q96PJ5 515 aa15.4■□□□□ 0.06
ACTN1-209ENST00000553659 VPS35Q96QK1 796 aa15.4■□□□□ 0.06
ACTN1-209ENST00000553659 WDR55Q9H6Y2 383 aaPredicted RBP15.4■□□□□ 0.06
ACTN1-209ENST00000553659 PDE7BQ9NP56 450 aa15.4■□□□□ 0.06
ACTN1-209ENST00000553659 MID1IP1Q9NPA3 183 aa15.4■□□□□ 0.06
ACTN1-209ENST00000553659 LHX9Q9NQ69 397 aa15.4■□□□□ 0.06
ACTN1-209ENST00000553659 CD274Q9NZQ7 290 aa15.4■□□□□ 0.06
ACTN1-209ENST00000553659 SEMA5BQ9P283 1151 aa15.4■□□□□ 0.06
ACTN1-209ENST00000553659 TMPRSS11EQ9UL52 423 aa15.4■□□□□ 0.06
ACTN1-209ENST00000553659 OARD1Q9Y530 152 aa15.4■□□□□ 0.06
ACTN1-209ENST00000553659 MED13Q9UHV7 2174 aa15.4■□□□□ 0.06
ACTN1-209ENST00000553659 RELNP78509 3460 aa15.39■□□□□ 0.05
ACTN1-209ENST00000553659 C21orf140B9A014 251 aa15.39■□□□□ 0.05
ACTN1-209ENST00000553659 KCNJ13O60928 360 aa15.39■□□□□ 0.05
ACTN1-209ENST00000553659 ENO2P09104 434 aaPredicted RBP15.39■□□□□ 0.05
ACTN1-209ENST00000553659 VCLP18206 1134 aa15.39■□□□□ 0.05
ACTN1-209ENST00000553659 PIK3CGP48736 1102 aa15.39■□□□□ 0.05
ACTN1-209ENST00000553659 CYLC2Q14093 348 aaPredicted RBP15.39■□□□□ 0.05
ACTN1-209ENST00000553659 TGFBIQ15582 683 aa15.39■□□□□ 0.05
ACTN1-209ENST00000553659 TRMT5Q32P41 509 aaKnown RBP15.39■□□□□ 0.05
ACTN1-209ENST00000553659 GPRC6AQ5T6X5 926 aa15.39■□□□□ 0.05
ACTN1-209ENST00000553659 BPHLQ86WA6 291 aaPredicted RBP15.39■□□□□ 0.05
ACTN1-209ENST00000553659 TCAIMQ8N3R3 496 aa15.39■□□□□ 0.05
ACTN1-209ENST00000553659 PDPRQ8NCN5 879 aa15.39■□□□□ 0.05
ACTN1-209ENST00000553659 AGAP11Q8TF27 550 aa15.39■□□□□ 0.05
ACTN1-209ENST00000553659 CT55Q8WUE5 264 aa15.39■□□□□ 0.05
ACTN1-209ENST00000553659 FAM136AQ96C01 138 aa15.39■□□□□ 0.05
ACTN1-209ENST00000553659 C19orf60Q96EN9 201 aa15.39■□□□□ 0.05
ACTN1-209ENST00000553659 SLC30A3Q99726 388 aa15.39■□□□□ 0.05
ACTN1-209ENST00000553659 SHCBP1LQ9BZQ2 653 aa15.39■□□□□ 0.05
ACTN1-209ENST00000553659 ZBTB26Q9HCK0 441 aa15.39■□□□□ 0.05
ACTN1-209ENST00000553659 RARRES3Q9UL19 164 aa15.39■□□□□ 0.05
ACTN1-209ENST00000553659 WDR37Q9Y2I8 494 aa15.39■□□□□ 0.05
ACTN1-209ENST00000553659 BLACEA4D250 179 aa15.38■□□□□ 0.05
ACTN1-209ENST00000553659 PABPN1LA6NDY0 278 aaKnown RBP15.38■□□□□ 0.05
ACTN1-209ENST00000553659 UBDO15205 165 aa15.38■□□□□ 0.05
ACTN1-209ENST00000553659 SLC16A5O15375 505 aa15.38■□□□□ 0.05
ACTN1-209ENST00000553659 TIAF1O95411 115 aa15.38■□□□□ 0.05
ACTN1-209ENST00000553659 ESRRBO95718 433 aa15.38■□□□□ 0.05
ACTN1-209ENST00000553659 MPC1LP0DKB6 136 aa15.38■□□□□ 0.05
ACTN1-209ENST00000553659 UROSP10746 265 aa15.38■□□□□ 0.05
ACTN1-209ENST00000553659 UGT1A6P19224 532 aa15.38■□□□□ 0.05
ACTN1-209ENST00000553659 UGT1A1P22309 533 aa15.38■□□□□ 0.05
ACTN1-209ENST00000553659 UGT1A4P22310 534 aa15.38■□□□□ 0.05
ACTN1-209ENST00000553659 HALP42357 657 aa15.38■□□□□ 0.05
ACTN1-209ENST00000553659 CPA2P48052 419 aa15.38■□□□□ 0.05
ACTN1-209ENST00000553659 STX1BP61266 288 aa15.38■□□□□ 0.05
ACTN1-209ENST00000553659 SP140Q13342 867 aa15.38■□□□□ 0.05
ACTN1-209ENST00000553659 GTF2H3Q13889 308 aa15.38■□□□□ 0.05
ACTN1-209ENST00000553659 ATP13A5Q4VNC0 1218 aa15.38■□□□□ 0.05
ACTN1-209ENST00000553659 LDLRAP1Q5SW96 308 aa15.38■□□□□ 0.05
ACTN1-209ENST00000553659 PLEKHS1Q5SXH7 462 aa15.38■□□□□ 0.05
ACTN1-209ENST00000553659 SULT1C3Q6IMI6 304 aa15.38■□□□□ 0.05
ACTN1-209ENST00000553659 NEK10Q6ZWH5 1172 aa15.38■□□□□ 0.05
ACTN1-209ENST00000553659 NET1Q7Z628 596 aaPredicted RBP15.38■□□□□ 0.05
ACTN1-209ENST00000553659 TRAPPC5Q8IUR0 188 aa15.38■□□□□ 0.05
ACTN1-209ENST00000553659 SCUBE1Q8IWY4 988 aa15.38■□□□□ 0.05
ACTN1-209ENST00000553659 UBTD2Q8WUN7 234 aa15.38■□□□□ 0.05
ACTN1-209ENST00000553659 SLC41A2Q96JW4 573 aa15.38■□□□□ 0.05
ACTN1-209ENST00000553659 ZNF382Q96SR6 550 aa15.38■□□□□ 0.05
ACTN1-209ENST00000553659 GPR87Q9BY21 358 aa15.38■□□□□ 0.05
ACTN1-209ENST00000553659 PCTPQ9UKL6 214 aa15.38■□□□□ 0.05
ACTN1-209ENST00000553659 PRPF19Q9UMS4 504 aaKnown RBP15.38■□□□□ 0.05
ACTN1-209ENST00000553659 ICE1Q9Y2F5 2266 aa15.37■□□□□ 0.05
ACTN1-209ENST00000553659 LRRK2Q5S007 2527 aa15.37■□□□□ 0.05
ACTN1-209ENST00000553659 IGHV5-51A0A0C4DH38 117 aa15.37■□□□□ 0.05
ACTN1-209ENST00000553659 SKAP2O75563 359 aaPredicted RBP15.37■□□□□ 0.05
ACTN1-209ENST00000553659 FTH1P02794 183 aa15.37■□□□□ 0.05
ACTN1-209ENST00000553659 C8GP07360 202 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms